Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08384 Brassica carinata HOM05D003858 ORTHO05D005878 4.7e-257 891.0 457 100.0
C04p54940 Brassica napus HOM05D003858 ORTHO05D005878 4.7e-257 891.0 457 100.0
A04p19370 Brassica napus HOM05D003858 ORTHO05D005878 1.8e-256 889.0 457 99.3
BraA04t17533Z Brassica rapa HOM05D003858 ORTHO05D005878 2.3e-256 888.6 457 99.8
BolC4t27030H Brassica oleracea HOM05D003858 ORTHO05D005878 1.1e-250 869.8 457 97.6
BcaB06g28028 Brassica carinata HOM05D003858 ORTHO05D005878 1.5e-250 869.4 457 96.5
Sp4g03970 Schrenkiella parvula HOM05D003858 ORTHO05D005878 3.2e-245 851.7 457 95.4
Thhalv10000120m.g Eutrema salsugineum HOM05D003858 ORTHO05D005878 2.0e-239 832.4 457 92.8
AT5G37350 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 3.5e-236 821.6 459 91.9
AL4G16080 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 2.2e-230 802.4 424 94.3
AT2G24990 Arabidopsis thaliana HOM05D003858 ORTHO05D005878 1.4e-229 799.7 424 93.6
Carub.0004s0455 Capsella rubella HOM05D003858 ORTHO05D005878 3.2e-229 798.5 424 93.6
CARHR116740 Cardamine hirsuta HOM05D003858 ORTHO05D005878 5.6e-226 787.7 458 88.4
Aa31sc86G50 Aethionema arabicum HOM05D003858 ORTHO05D005878 1.2e-223 780.0 452 85.6
AL7G45930 Arabidopsis lyrata HOM05D003858 ORTHO05D005878 1.3e-214 750.0 424 90.3
THA.LOC104800505 Tarenaya hassleriana HOM05D003858 ORTHO05D005878 5.3e-208 728.0 423 83.7
COL.COLO4_28121 Corchorus olitorius HOM05D003858 ORTHO05D005878 2.5e-202 709.1 451 77.8
Aa31LG8G17300 Aethionema arabicum HOM05D003858 ORTHO05D005878 5.6e-202 708.0 446 80.7
Thecc.03G129000 Theobroma cacao HOM05D003858 ORTHO05D005878 1.8e-200 703.0 450 77.8
Cpa.g.sc250.13 Carica papaya HOM05D003858 ORTHO05D005878 3.4e-199 698.7 451 76.9
Duzib205G0757 Durio zibethinus HOM05D003858 ORTHO05D005878 2.2e-198 696.0 450 76.9
TWI23G0194 Tripterygium wilfordii HOM05D003858 ORTHO05D005878 3.8e-198 695.3 448 75.7
Nitab4.5_0005642g0040 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.4e-197 693.3 417 81.1
Nitab4.5_0006042g0010 Nicotiana tabacum HOM05D003858 ORTHO05D005878 1.4e-197 693.3 417 81.5
CiPaw.12G042900 Carya illinoinensis HOM05D003858 ORTHO05D005878 1.9e-197 693.0 440 77.3
CANSAT80G0729 Cannabis sativa HOM05D003858 ORTHO05D005878 2.5e-197 692.6 452 76.1
CSS0032323 Camellia sinensis var. sinensis HOM05D003858 ORTHO05D005878 4.2e-197 691.8 418 80.6
Dinv23145 Davidia involucrata HOM05D003858 ORTHO05D005878 9.3e-197 690.6 434 79.7
CsaV3_1G007630 Cucumis sativus L. HOM05D003858 ORTHO05D005878 2.1e-196 689.5 448 75.4
MELO3C002182.2 Cucumis melo HOM05D003858 ORTHO05D005878 2.7e-196 689.1 448 75.2
Actinidia08869 Actinidia chinensis HOM05D003858 ORTHO05D005878 3.5e-196 688.7 418 80.1
Gohir.D03G114300 Gossypium hirsutum HOM05D003858 ORTHO05D005878 6.0e-196 688.0 449 76.4
Gorai.003G120600 Gossypium raimondii HOM05D003858 ORTHO05D005878 6.0e-196 688.0 449 76.4
Manes.06G119400 Manihot esculenta HOM05D003858 ORTHO05D005878 1.0e-195 687.2 420 80.7
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 2.3e-195 686.0 419 80.0
Atru.chr9.1128 Acer truncatum HOM05D003858 ORTHO05D005878 3.0e-195 685.6 435 77.0
Gohir.A03G052800 Gossypium hirsutum HOM05D003858 ORTHO05D005878 5.1e-195 684.9 449 76.2
Rhsim12G0174400 Rhododendron simsii HOM05D003858 ORTHO05D005878 8.7e-195 684.1 418 79.9
Rhsim10G0051500 Rhododendron simsii HOM05D003858 ORTHO05D005878 1.5e-194 683.3 430 77.9
TAR371G0204 Trochodendron aralioides HOM05D003858 ORTHO05D005878 1.5e-194 683.3 420 79.0
Potri.015G096100 Populus trichocarpa HOM05D003858 ORTHO05D005878 2.5e-194 682.6 445 76.6
vmacro16677 Vaccinium macrocarpon HOM05D003858 ORTHO05D005878 3.3e-194 682.2 418 80.1
arahy.Tifrunner.gnm1.ann1.L81EPG Arachis hypogaea HOM05D003858 ORTHO05D005878 5.7e-194 681.4 418 79.7
Sabra15G0116900 Salix brachista HOM05D003858 ORTHO05D005878 5.7e-194 681.4 435 78.4
arahy.Tifrunner.gnm1.ann1.LEEI49 Arachis hypogaea HOM05D003858 ORTHO05D005878 7.4e-194 681.0 418 79.7
CAN.G774.2 Capsicum annuum HOM05D003858 ORTHO05D005878 9.6e-194 680.6 437 77.1
Cc10_g13400 Coffea canephora HOM05D003858 ORTHO05D005878 1.3e-193 680.2 418 80.1
Peaxi162Scf00119g00520 Petunia axillaris HOM05D003858 ORTHO05D005878 1.6e-193 679.9 417 79.6
CiPaw.15G056500 Carya illinoinensis HOM05D003858 ORTHO05D005878 3.7e-193 678.7 435 77.7
Solyc08g080850.4 Solanum lycopersicum HOM05D003858 ORTHO05D005878 8.2e-193 677.6 413 79.9
PGSC0003DMG400012349 Solanum tuberosum HOM05D003858 ORTHO05D005878 2.4e-192 676.0 411 80.3
Oeu001550.1 Olea europaea HOM05D003858 ORTHO05D005878 3.1e-192 675.6 439 77.4
Sopen08g029150 Solanum pennellii HOM05D003858 ORTHO05D005878 4.1e-192 675.2 411 80.0
Hma1.2p1_0014F.1_g009460 Hydrangea macrophylla HOM05D003858 ORTHO05D005878 5.3e-192 674.9 420 78.8
Nn4g22329 Nelumbo nucifera HOM05D003858 ORTHO05D005878 1.5e-191 673.3 421 77.2
Sc10g0010460 Simmondsia chinensis HOM05D003858 ORTHO05D005878 2.6e-191 672.5 436 78.0
DCAR_001872 Daucus carota HOM05D003858 ORTHO05D005878 3.4e-191 672.2 431 76.8
RcHm_v2.0_Chr7g0190211 Rosa chinensis HOM05D003858 ORTHO05D005878 4.5e-191 671.8 419 78.8
SalBow6G4120 Salvia bowleyana HOM05D003858 ORTHO05D005878 4.5e-191 671.8 438 76.5
Sed0027713 Sechium edule HOM05D003858 ORTHO05D005878 5.9e-191 671.4 419 77.8
FvH4_5g08310 Fragaria vesca HOM05D003858 ORTHO05D005878 7.6e-191 671.0 419 79.0
HanXRQChr02g0034711 Helianthus annuus HOM05D003858 ORTHO05D005878 7.6e-191 671.0 457 75.7
SGA_v2.0_scaffold28G11963 Striga asiatica HOM05D003858 ORTHO05D005878 7.6e-191 671.0 437 78.7
FAN08G1590 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.7e-190 669.8 419 78.8
MD14G1157300 Malus domestica HOM05D003858 ORTHO05D005878 1.7e-190 669.8 418 77.8
Prupe.5G151200 Prunus persica HOM05D003858 ORTHO05D005878 2.2e-190 669.5 419 77.3
SGA_v2.0_scaffold2G01192 Striga asiatica HOM05D003858 ORTHO05D005878 5.0e-190 668.3 438 76.7
Hund02439 Selenicereus undatus HOM05D003858 ORTHO05D005878 5.5e-189 664.8 419 78.0
Lj1g0027711 Lotus japonicus HOM05D003858 ORTHO05D005878 9.3e-189 664.1 420 78.3
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 4.6e-188 661.8 446 75.8
Cfa015653 Carpinus fangiana HOM05D003858 ORTHO05D005878 7.9e-188 661.0 419 75.9
ECA247G4076 Erigeron canadensis HOM05D003858 ORTHO05D005878 1.3e-187 660.2 437 75.5
Haze_09759 Corylus avellana HOM05D003858 ORTHO05D005878 3.9e-187 658.7 449 72.4
Migut.N03254 Erythranthe guttata HOM05D003858 ORTHO05D005878 3.9e-187 658.7 421 77.2
Glyma.18G230300 Glycine max HOM05D003858 ORTHO05D005878 3.9e-187 658.7 417 78.4
Lalb_Chr01g0021111 Lupinus albus HOM05D003858 ORTHO05D005878 5.7e-186 654.8 426 77.0
AUR62028258 Chenopodium quinoa HOM05D003858 ORTHO05D005878 4.8e-185 651.7 416 77.9
Lsat_1_v5_gn_1_28960 Lactuca sativa HOM05D003858 ORTHO05D005878 1.1e-184 650.6 451 74.3
Phvul.008G067600 Phaseolus vulgaris HOM05D003858 ORTHO05D005878 1.4e-184 650.2 417 76.7
Glyma.09G261800 Glycine max HOM05D003858 ORTHO05D005878 3.1e-184 649.0 417 78.4
PGR004G1062 Punica granatum HOM05D003858 ORTHO05D005878 3.4e-183 645.6 462 71.2
QL10p002959 Quercus lobata HOM05D003858 ORTHO05D005878 3.4e-183 645.6 418 77.8
Lj5C96T4 Lonicera japonica HOM05D003858 ORTHO05D005878 4.5e-183 645.2 422 75.6
Haze_07135 Corylus avellana HOM05D003858 ORTHO05D005878 1.0e-182 644.0 426 73.7
Ah.01g020640 Amaranthus hybridus HOM05D003858 ORTHO05D005878 5.5e-181 638.3 459 71.7
DCAR_021618 Daucus carota HOM05D003858 ORTHO05D005878 1.2e-180 637.1 489 67.3
PSO017G3328 Papaver somniferum HOM05D003858 ORTHO05D005878 6.1e-180 634.8 457 70.7
PSO478G4955 Papaver somniferum HOM05D003858 ORTHO05D005878 3.0e-179 632.5 457 70.2
TPR.G2433 Trifolium pratense HOM05D003858 ORTHO05D005878 3.0e-179 632.5 418 74.4
Aqoxy3G00800 Aquilegia oxysepala HOM05D003858 ORTHO05D005878 5.1e-179 631.7 432 73.1
Eucgr.E01497 Eucalyptus grandis HOM05D003858 ORTHO05D005878 5.1e-179 631.7 422 75.8
Medtr7g090710 Medicago truncatula HOM05D003858 ORTHO05D005878 9.7e-178 627.5 454 70.0
EL10Ac9g21903 Beta vulgaris HOM05D003858 ORTHO05D005878 1.1e-176 624.0 419 75.2
VMungo1383G3568 Vigna mungo HOM05D003858 ORTHO05D005878 2.4e-176 622.9 423 73.0
CDE05G2345 Ceratophyllum demersum HOM05D003858 ORTHO05D005878 2.6e-175 619.4 452 69.5
SalBow7G4372 Salvia bowleyana HOM05D003858 ORTHO05D005878 6.7e-171 604.7 441 71.0
FAN04G1110 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.1e-168 597.4 421 72.4
FAN18G4532 Fragaria x ananassa HOM05D003858 ORTHO05D005878 9.1e-168 594.3 421 72.2
SEGI_19941 Sequoiadendron giganteum HOM05D003858 ORTHO05D005878 1.1e-162 577.4 417 68.6
VMungo1383G2243 Vigna mungo HOM05D003858 ORTHO05D005878 1.1e-162 577.4 416 70.7
ClCG01G014690 Citrullus lanatus HOM05D003858 ORTHO05D005878 1.3e-161 573.9 450 65.6
HPP92_020969 Vanilla planifolia HOM05D003858 ORTHO05D005878 2.8e-161 572.8 398 70.9
Zm00001eb256840 Zea mays HOM05D003858 ORTHO05D005878 4.1e-160 568.9 425 69.6
Zm00001eb103140 Zea mays HOM05D003858 ORTHO05D005878 1.6e-159 567.0 425 69.4
Psat3g110800 Pisum sativum HOM05D003858 ORTHO05D005878 7.7e-159 564.7 415 69.2
AUR62003032 Chenopodium quinoa HOM05D003858 ORTHO05D005878 2.2e-158 563.1 341 80.9
unitig_21.g20184 Utricularia gibba HOM05D003858 ORTHO05D005878 6.5e-158 561.6 435 66.9
ATR0559G302 Amborella trichopoda HOM05D003858 ORTHO05D005878 5.5e-157 558.5 422 69.7
Os07g0162300 Oryza sativa ssp. japonica HOM05D003858 ORTHO05D005878 1.2e-156 557.4 386 72.5
PSO170G6136 Papaver somniferum HOM05D003858 ORTHO05D005878 6.1e-156 555.1 420 67.6
RcHm_v2.0_Chr5g0020401 Rosa chinensis HOM05D003858 ORTHO05D005878 8.0e-156 554.7 418 66.0
AUR62007839 Chenopodium quinoa HOM05D003858 ORTHO05D005878 2.3e-155 553.1 395 72.2
MBI07_g31017_MAGBIO Magnolia biondii HOM05D003858 ORTHO05D005878 5.9e-151 538.5 342 77.5
TPR.G23280 Trifolium pratense HOM05D003858 ORTHO05D005878 8.5e-150 534.6 350 74.0
TAR629G0830 Trochodendron aralioides HOM05D003858 ORTHO05D005878 1.4e-147 527.3 353 74.5
Mapoly0084s0039 Marchantia polymorpha HOM05D003858 ORTHO05D005878 1.2e-146 524.2 447 60.9
Ca_07893_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 2.3e-142 510.0 359 71.6
FvH4_5g16770 Fragaria vesca HOM05D003858 ORTHO05D005878 6.6e-142 508.4 407 63.4
FAN16G2509 Fragaria x ananassa HOM05D003858 ORTHO05D005878 1.9e-141 506.9 407 62.7
SMO117G0291 Selaginella moellendorffii HOM05D003858 ORTHO05D005878 3.4e-138 496.1 405 63.0
MD06G1142000 Malus domestica HOM05D003858 ORTHO05D005878 5.9e-135 485.3 415 61.9
Medtr7g076710 Medicago truncatula HOM05D003858 ORTHO05D005878 1.5e-130 470.7 350 68.0
FAN20G1682 Fragaria x ananassa HOM05D003858 ORTHO05D005878 2.9e-129 466.5 422 58.3
PSO423G0213 Papaver somniferum HOM05D003858 ORTHO05D005878 9.5e-125 451.4 408 60.0
PSO724G1315 Papaver somniferum HOM05D003858 ORTHO05D005878 2.1e-124 450.3 357 65.3
Pp3c21_1450 Physcomitrium patens HOM05D003858 ORTHO05D005878 4.7e-124 449.1 346 65.0
Medtr7g012400 Medicago truncatula HOM05D003858 ORTHO05D005878 1.5e-122 444.1 388 60.8
Cre13.g580900 Chlamydomonas reinhardtii HOM05D003858 ORTHO05D005878 7.5e-122 441.8 496 49.4
Lj7A11G39 Lonicera japonica HOM05D003858 ORTHO05D005878 2.9e-121 439.9 504 49.2
AagrBONN_evm.TU.Sc2ySwM_228.678 Anthoceros agrestis HOM05D003858 ORTHO05D005878 3.7e-121 439.5 396 56.6
TPR.G21069 Trifolium pratense HOM05D003858 ORTHO05D005878 1.6e-119 434.1 416 57.5
Lj7A12G16 Lonicera japonica HOM05D003858 ORTHO05D005878 7.8e-119 431.8 432 53.2
PSO170G3101 Papaver somniferum HOM05D003858 ORTHO05D005878 4.3e-117 426.0 380 59.7
PSO724G0964 Papaver somniferum HOM05D003858 ORTHO05D005878 1.2e-111 407.9 408 56.4
SHI21468 Sapria himalayana HOM05D003858 ORTHO05D005878 2.7e-111 406.8 608 41.6
PRCOL_00003781 Prasinoderma coloniale HOM05D003858 ORTHO05D005878 3.5e-111 406.4 416 53.1
PSO724G1140 Papaver somniferum HOM05D003858 ORTHO05D005878 2.5e-109 400.2 406 56.7
MCO12G200 Micromonas commoda HOM05D003858 ORTHO05D005878 5.1e-102 375.9 351 57.0
RcHm_v2.0_Chr5g0063291 Rosa chinensis HOM05D003858 ORTHO05D005878 1.3e-97 361.3 435 49.9
Ca_28300_v3 Cicer arietinum L. HOM05D003858 ORTHO05D005878 2.1e-95 354.0 262 68.7
RcHm_v2.0_Chr5g0063241 Rosa chinensis HOM05D003858 ORTHO05D005878 2.1e-95 354.0 441 48.3
PSO063G1302 Papaver somniferum HOM05D003858 ORTHO05D005878 1.5e-93 347.8 281 64.4
Zm00001eb256780 Zea mays HOM05D003858 ORTHO05D005878 1.5e-93 347.8 257 70.4
CBR_g61467 Chara braunii HOM05D003858 ORTHO05D005878 4.2e-88 329.7 303 57.1
SHI21367 Sapria himalayana HOM05D003858 ORTHO05D005878 5.1e-86 322.8 467 42.6
Haze_27048 Corylus avellana HOM05D003858 ORTHO05D005878 3.3e-85 320.1 375 45.1
DCAR_029022 Daucus carota HOM05D003858 ORTHO05D005878 1.3e-84 318.2 417 45.6
Cfa023770 Carpinus fangiana HOM05D003858 ORTHO05D005878 3.2e-80 303.5 332 51.2
CDE05G1919 Ceratophyllum demersum HOM05D003858 ORTHO05D015239 2.9e-73 280.4 194 70.6
PSO421G0376 Papaver somniferum HOM05D003858 ORTHO05D015239 1.5e-69 268.1 350 47.7
arahy.Tifrunner.gnm1.ann1.RIH0QL Arachis hypogaea HOM05D003858 ORTHO05D015239 4.8e-68 263.1 156 81.4
Actinidia36803 Actinidia chinensis HOM05D003858 ORTHO05D015239 2.7e-63 247.3 151 80.1
Actinidia36804 Actinidia chinensis HOM05D003858 ORTHO05D005878 1.8e-46 191.4 281 44.8
C08p38970 Brassica napus HOM05D003858 ORTHO05D033539 1.1e-40 172.2 148 68.9
Cc10_g13370 Coffea canephora HOM05D003858 ORTHO05D015239 8.8e-38 162.5 103 74.8
BolC8t51471H Brassica oleracea HOM05D003858 ORTHO05D033539 4.1e-35 153.7 148 64.9
BolC8t51470H Brassica oleracea HOM05D003858 ORTHO05D015239 5.5e-32 143.3 122 64.8
FAN13G2455 Fragaria x ananassa HOM05D003858 ORTHO05D015239 2.3e-30 137.9 100 69.0
Zm00001eb256800 Zea mays HOM05D003858 ORTHO05D033539 2.0e-26 124.8 130 56.9
FAN08G1067 Fragaria x ananassa HOM05D003858 ORTHO05D015239 1.7e-25 121.7 181 42.5
Medtr6g024025 Medicago truncatula HOM05D003858 ORTHO05D267118 2.5e-24 117.9 106 57.5
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.0e-22 110.9 104 57.7
PSO675G5360 Papaver somniferum HOM05D003858 ORTHO05D015239 2.0e-21 108.2 99 59.6
FAN08G1033 Fragaria x ananassa HOM05D003858 ORTHO05D005878 3.4e-21 107.5 70 70.0
CBR_g61468 Chara braunii HOM05D003858 ORTHO05D131775 2.4e-19 101.3 152 46.7
FvH4_3g12461 Fragaria vesca HOM05D000004 ORTHO05D000002 4.6e-18 97.1 148 41.9
BcaC07g40899 Brassica carinata HOM05D003858 ORTHO05D015239 1.5e-16 92.0 96 55.2
FvH4_5g25261 Fragaria vesca HOM05D003858 ORTHO05D015239 3.3e-16 90.9 74 62.2
TAR625G0709 Trochodendron aralioides HOM05D003858 ORTHO05D015239 1.2e-15 89.0 45 91.1
COL.COLO4_09285 Corchorus olitorius HOM05D003858 ORTHO05D155188 1.4e-14 85.5 48 83.3
FAN21G1362 Fragaria x ananassa HOM05D003858 ORTHO05D207154 3.4e-13 80.9 163 34.4
HanXRQChr13g0426321 Helianthus annuus HOM05D003858 ORTHO05D000008 3.4e-13 80.9 66 56.1
Zm00001eb256810 Zea mays HOM05D003858 ORTHO05D005878 1.1e-11 75.9 120 40.0
Peaxi162Scf00586g00512 Petunia axillaris HOM05D004480 ORTHO05D005546 3.5e-10 70.9 275 24.4
PRCOL_00001861 Prasinoderma coloniale HOM05D004480 ORTHO05D005546 3.5e-10 70.9 206 29.6
Nitab4.5_0002844g0040 Nicotiana tabacum HOM05D004480 ORTHO05D005546 1.3e-09 68.9 294 23.1
ECA247G3860 Erigeron canadensis HOM05D000031 ORTHO05D000030 6.6e-09 66.6 60 56.7
Potri.017G001100 Populus trichocarpa HOM05D004480 ORTHO05D005546 1.9e-08 65.1 199 24.6
DCAR_007996 Daucus carota HOM05D003858 ORTHO05D176634 4.3e-08 63.9 51 56.9
ECA247G3834 Erigeron canadensis HOM05D000031 ORTHO05D000030 4.3e-08 63.9 53 60.4
Nn7g35785 Nelumbo nucifera HOM05D004480 ORTHO05D005546 1.6e-07 62.0 199 24.1
Sabra17G0005500 Salix brachista HOM05D000001 ORTHO05D005546 1.6e-07 62.0 199 25.6
Nitab4.5_0002686g0020 Nicotiana tabacum HOM05D004480 ORTHO05D005546 3.6e-07 60.8 209 25.8
CiPaw.05G188800 Carya illinoinensis HOM05D003858 ORTHO05D127864 8.1e-07 59.7 29 93.1


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