Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p53620 Brassica napus HOM05D000162 ORTHO05D003288 2.8e-35 152.1 127 100.0
BcaC02g08506 Brassica carinata HOM05D000162 ORTHO05D003288 6.3e-19 97.8 163 67.5
BcaB03g11740 Brassica carinata HOM05D000162 ORTHO05D003288 2.0e-17 92.8 125 45.6
BcaC04g22687 Brassica carinata HOM05D000162 ORTHO05D003288 1.1e-15 87.0 111 80.2
C04p29110 Brassica napus HOM05D000162 ORTHO05D003288 8.8e-13 77.4 101 46.5
BolC4t26917H Brassica oleracea HOM05D000162 ORTHO05D003288 4.3e-12 75.1 40 95.0
BcaC04g20649 Brassica carinata HOM05D000162 ORTHO05D003288 8.2e-11 70.9 122 45.1
BraA09t37012Z Brassica rapa HOM05D000162 ORTHO05D003288 9.1e-10 67.4 97 84.5
A09p13890 Brassica napus HOM05D000162 ORTHO05D003288 1.5e-09 66.6 104 57.7
BolC3t21476H Brassica oleracea HOM05D000162 ORTHO05D003288 2.0e-09 66.2 35 91.4
C08p51150 Brassica napus HOM05D000162 ORTHO05D000090 5.9e-09 64.7 43 67.4
BolC8t52641H Brassica oleracea HOM05D000162 ORTHO05D000090 5.9e-09 64.7 43 67.4
CARHR051010 Cardamine hirsuta HOM05D010115 ORTHO05D003288 2.2e-08 62.8 38 73.7
A09p66920 Brassica napus HOM05D000162 ORTHO05D000090 3.8e-08 62.0 43 65.1
Thhalv10015983m.g Eutrema salsugineum HOM05D000162 ORTHO05D003288 8.5e-08 60.8 122 37.7
BcaC04g22583 Brassica carinata HOM05D000162 ORTHO05D024264 3.2e-07 58.9 42 59.5
Carub.0002s0148 Capsella rubella HOM05D000162 ORTHO05D003288 3.2e-07 58.9 35 85.7
BraA09t42027Z Brassica rapa HOM05D000162 ORTHO05D000090 4.2e-07 58.5 40 65.0
CARHR051150 Cardamine hirsuta HOM05D000162 ORTHO05D003288 9.4e-07 57.4 35 82.9
AL2G12380 Arabidopsis lyrata HOM05D000162 ORTHO05D003288 1.6e-06 56.6 35 80.0
A09p13590 Brassica napus HOM05D000162 ORTHO05D003288 1.6e-06 56.6 35 80.0
CARHR048090 Cardamine hirsuta HOM05D000162 ORTHO05D003288 1.6e-06 56.6 111 35.1
CARHR151310 Cardamine hirsuta HOM05D000162 ORTHO05D003288 1.6e-06 56.6 111 37.8
Carub.0002s0209 Capsella rubella HOM05D000162 ORTHO05D003288 2.1e-06 56.2 35 80.0
BraA09t37036Z Brassica rapa HOM05D000162 ORTHO05D003288 6.1e-06 54.7 34 79.4


User provided reference genes

Program Settings