Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p53220 Brassica napus HOM05D003570 ORTHO05D004207 5.7e-127 457.6 233 100.0
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 7.5e-95 350.9 229 83.0
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 4.7e-89 331.6 221 80.1
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 2.5e-82 309.3 201 84.1
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 3.2e-61 239.2 150 85.3
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 1.8e-59 233.4 150 83.3
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 1.6e-57 226.9 150 83.3
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 9.0e-56 221.1 151 74.8
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 9.9e-55 217.6 150 74.7
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.3e-54 217.2 150 81.3
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 4.2e-53 212.2 166 72.9
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.2e-52 210.7 166 71.7
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 4.6e-52 208.8 150 76.0
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 3.9e-51 205.7 152 77.6
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 5.3e-48 195.3 151 74.8
C07p30160 Brassica napus HOM05D003570 ORTHO05D004207 1.9e-45 186.8 126 77.8
BolC4t26886H Brassica oleracea HOM05D003570 ORTHO05D004207 8.7e-43 177.9 116 78.4
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-42 177.6 186 56.5
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 1.1e-42 177.6 186 56.5
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 1.5e-42 177.2 150 71.3
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 8.5e-38 161.4 149 59.7
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 5.7e-34 148.7 118 67.8
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 5.3e-32 142.1 139 59.7
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 1.2e-31 141.0 157 52.9
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 9.7e-26 121.3 146 52.7
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 2.2e-25 120.2 155 46.5
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 4.5e-23 112.5 156 43.6
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 5.9e-23 112.1 156 39.7
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 1.0e-22 111.3 152 42.8
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 1.3e-22 110.9 148 46.6
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 3.8e-22 109.4 153 43.1
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 6.5e-22 108.6 156 39.1
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 1.9e-21 107.1 193 38.9
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 1.9e-21 107.1 157 41.4
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 1.9e-21 107.1 150 42.0
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.5e-21 106.7 150 41.3
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 2.5e-21 106.7 154 41.6
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 5.5e-21 105.5 154 39.6
BcaC02g12092 Brassica carinata HOM05D003570 ORTHO05D004207 7.2e-21 105.1 54 94.4
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 4.7e-20 102.4 146 41.8
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 4.7e-20 102.4 150 42.0
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.0e-19 101.3 144 41.0
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.4e-19 100.9 202 33.7
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 1.8e-19 100.5 161 39.1
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 5.2e-19 99.0 158 36.1
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 6.7e-19 98.6 150 38.7
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 6.7e-19 98.6 154 40.9
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 8.8e-19 98.2 146 45.2
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 1.1e-18 97.8 158 38.6
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.5e-18 97.4 158 36.1
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.0e-18 97.1 150 38.7
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 2.6e-18 96.7 158 36.1
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.3e-18 96.3 154 38.3
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 4.4e-18 95.9 157 37.6
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 5.7e-18 95.5 150 40.7
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 9.7e-18 94.7 140 40.0
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 4.8e-17 92.4 182 36.3
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 6.3e-17 92.0 159 37.7
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 1.1e-16 91.3 149 38.3
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.1e-16 91.3 153 37.9
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 7.0e-16 88.6 182 35.2
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 9.1e-16 88.2 150 37.3
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 9.1e-16 88.2 154 36.4
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 9.1e-16 88.2 185 32.4
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 9.1e-16 88.2 154 36.4
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.2e-15 87.8 154 35.7
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 1.6e-15 87.4 167 34.1
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 2.0e-15 87.0 181 33.7
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.6e-15 86.7 154 35.7
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 3.5e-15 86.3 146 37.7
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 1.0e-14 84.7 159 35.2
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.3e-14 84.3 138 37.7
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 1.7e-14 84.0 147 36.7
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 6.5e-14 82.0 143 36.4
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 6.5e-14 82.0 131 38.2
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 1.5e-13 80.9 112 42.0
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 1.9e-13 80.5 156 31.4
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 5.5e-13 79.0 156 36.5
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 7.2e-13 78.6 150 36.7
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 7.2e-13 78.6 167 29.3
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 7.2e-13 78.6 149 34.9
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 9.4e-13 78.2 154 36.4
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 2.1e-12 77.0 143 37.8
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 2.1e-12 77.0 142 35.2
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 2.1e-12 77.0 146 34.9
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 2.7e-12 76.6 154 33.8
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 8.0e-12 75.1 154 35.7
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 8.0e-12 75.1 150 37.3
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 1.0e-11 74.7 151 36.4
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.4e-11 74.3 115 36.5
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 3.0e-11 73.2 152 36.2
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 3.0e-11 73.2 150 36.0
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 1.2e-10 71.2 156 29.5
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 4.4e-10 69.3 178 28.1
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 9.7e-10 68.2 150 29.3
BcaC05g25083 Brassica carinata HOM05D003570 ORTHO05D004207 3.7e-09 66.2 59 57.6
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 8.2e-09 65.1 163 31.9
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 5.3e-08 62.4 149 36.9
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 1.2e-07 61.2 150 28.0
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 1.6e-07 60.8 188 31.4
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 2.0e-07 60.5 102 36.3
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 2.0e-07 60.5 102 36.3
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 3.5e-07 59.7 169 32.0
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 7.7e-07 58.5 171 32.2
BcaC09g48338 Brassica carinata HOM05D000313 ORTHO05D000065 6.5e-06 55.5 35 74.3
CDE06G1606 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 8.5e-06 55.1 96 34.4


User provided reference genes

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