Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 4.7e-59 231.5 163 100.0
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 4.7e-59 231.5 163 100.0
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 7.4e-57 224.2 163 98.2
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 9.7e-57 223.8 163 97.5
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 5.5e-52 208.0 163 93.9
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 2.3e-50 202.6 163 92.0
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 1.5e-49 199.9 163 88.3
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 2.2e-48 196.1 163 88.3
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 2.2e-48 196.1 166 89.2
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 2.2e-45 186.0 164 88.4
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 8.0e-43 177.6 171 81.3
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 1.1e-36 157.1 162 77.2
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 9.5e-28 127.5 169 71.0
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 5.2e-26 121.7 142 68.3
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 3.4e-25 119.0 157 65.0
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 5.4e-23 111.7 161 65.8
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 2.7e-22 109.4 160 63.8
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 2.7e-22 109.4 155 68.4
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 1.3e-21 107.1 160 61.2
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 8.6e-21 104.4 162 59.9
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 8.6e-21 104.4 163 64.4
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 1.1e-20 104.0 156 66.0
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 2.5e-20 102.8 143 60.8
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 3.3e-20 102.4 155 61.3
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 5.6e-20 101.7 145 65.5
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 5.6e-20 101.7 141 66.0
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 5.6e-20 101.7 152 63.2
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 7.3e-20 101.3 170 58.8
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 9.5e-20 100.9 137 61.3
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 9.5e-20 100.9 157 60.5
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 2.1e-19 99.8 130 68.5
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.8e-19 99.4 140 58.6
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 4.7e-19 98.6 172 61.0
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 4.7e-19 98.6 145 55.2
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 4.7e-19 98.6 150 64.0
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 6.1e-19 98.2 158 64.6
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.0e-18 97.4 166 60.8
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.0e-18 97.4 166 60.8
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 1.0e-18 97.4 153 65.4
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 1.0e-18 97.4 154 63.0
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 4.0e-18 95.5 157 52.2
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 5.2e-18 95.1 121 73.6
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 5.2e-18 95.1 136 61.8
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 6.8e-18 94.7 140 57.9
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 6.8e-18 94.7 156 61.5
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 8.9e-18 94.4 156 61.5
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 2.0e-17 93.2 157 63.7
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 2.0e-17 93.2 159 61.6
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 2.0e-17 93.2 129 65.1
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 2.0e-17 93.2 129 65.1
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 3.4e-17 92.4 134 70.1
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 3.4e-17 92.4 166 59.0
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 3.4e-17 92.4 159 61.6
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 7.5e-17 91.3 140 66.4
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 9.8e-17 90.9 156 60.9
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.3e-16 90.5 139 59.0
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.3e-16 90.5 160 58.8
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 2.2e-16 89.7 128 68.8
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.9e-16 89.4 170 58.2
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 4.9e-16 88.6 159 62.9
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 8.3e-16 87.8 156 58.3
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 1.1e-15 87.4 158 60.1
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 1.4e-15 87.0 164 60.4
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 2.4e-15 86.3 151 62.3
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 3.2e-15 85.9 145 62.1
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 3.2e-15 85.9 120 57.5
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 4.1e-15 85.5 142 64.1
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 7.0e-15 84.7 167 56.9
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 7.0e-15 84.7 140 65.7
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 9.2e-15 84.3 170 54.1
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 9.2e-15 84.3 170 57.1
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 1.2e-14 84.0 124 59.7
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.0e-14 83.2 131 57.3
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 3.5e-14 82.4 138 63.8
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 6.0e-14 81.6 139 43.9
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 7.8e-14 81.3 138 63.0
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.3e-13 80.5 153 59.5
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 3.0e-13 79.3 149 59.7
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 6.6e-13 78.2 133 62.4
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 8.6e-13 77.8 138 59.4
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 8.6e-13 77.8 133 62.4
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 8.6e-13 77.8 172 55.8
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.9e-12 76.6 135 61.5
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 1.9e-12 76.6 144 61.8
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 5.6e-12 75.1 141 57.4
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 1.2e-11 73.9 130 58.5
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 1.2e-11 73.9 209 46.9
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 2.1e-11 73.2 121 57.9
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.0e-10 68.9 140 61.4
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 8.9e-10 67.8 122 50.0
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 1.2e-09 67.4 109 62.4
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 1.2e-09 67.4 100 69.0
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 1.5e-09 67.0 116 60.3
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.0e-09 66.6 94 72.3
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 3.4e-09 65.9 146 57.5
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 7.5e-09 64.7 161 52.8
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 1.7e-08 63.5 160 47.5
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 1.1e-07 60.8 119 50.4
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.4e-07 60.5 156 48.1
TWI09G1014 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 2.4e-07 59.7 82 82.9
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 7.1e-07 58.2 82 43.9


User provided reference genes

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