Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p52440 Brassica napus HOM05D005883 ORTHO05D007682 3.2e-107 391.7 195 100.0
C04p52420 Brassica napus HOM05D005883 ORTHO05D007682 2.7e-106 388.7 195 99.5
C04p52460 Brassica napus HOM05D005883 ORTHO05D033605 6.5e-92 340.9 172 98.8
Thhalv10000163m.g Eutrema salsugineum HOM05D005883 ORTHO05D007682 1.8e-49 199.9 137 78.1
Sp4g02120 Schrenkiella parvula HOM05D005883 ORTHO05D007682 6.8e-49 198.0 137 78.8
AT2G23093 Arabidopsis thaliana HOM05D005883 ORTHO05D007682 2.6e-48 196.1 137 78.1
BcaC07g41008 Brassica carinata HOM05D005883 ORTHO05D007682 3.4e-48 195.7 137 75.9
BolC8t51582H Brassica oleracea HOM05D005883 ORTHO05D007682 3.4e-48 195.7 137 75.9
CARHR114450 Cardamine hirsuta HOM05D005883 ORTHO05D007682 3.4e-48 195.7 137 76.6
Carub.0004s0230 Capsella rubella HOM05D005883 ORTHO05D007682 5.8e-48 194.9 137 76.6
A09p57100 Brassica napus HOM05D005883 ORTHO05D007682 9.9e-48 194.1 137 75.9
BraA09t41102Z Brassica rapa HOM05D005883 ORTHO05D007682 9.9e-48 194.1 137 75.9
AL4G12930 Arabidopsis lyrata HOM05D005883 ORTHO05D007682 3.7e-47 192.2 137 75.9
C08p40120 Brassica napus HOM05D005883 ORTHO05D007682 1.1e-46 190.7 137 75.2
Aa31LG7G13800 Aethionema arabicum HOM05D005883 ORTHO05D007682 2.1e-45 186.4 166 63.3
THA.LOC104804202 Tarenaya hassleriana HOM05D005883 ORTHO05D007682 3.6e-42 175.6 162 61.7
THA.LOC104807620 Tarenaya hassleriana HOM05D005883 ORTHO05D007682 8.1e-42 174.5 161 61.5
FAN19G1709 Fragaria x ananassa HOM05D005883 ORTHO05D007682 4.9e-39 165.2 166 59.0
FAN23G0164 Fragaria x ananassa HOM05D005883 ORTHO05D007682 4.9e-39 165.2 166 59.0
RcHm_v2.0_Chr2g0107371 Rosa chinensis HOM05D005883 ORTHO05D007682 1.1e-38 164.1 166 58.4
FAN28G1490 Fragaria x ananassa HOM05D005883 ORTHO05D007682 1.4e-38 163.7 166 57.8
MD15G1293400 Malus domestica HOM05D005883 ORTHO05D007682 4.1e-38 162.2 166 57.2
MD02G1182200 Malus domestica HOM05D005883 ORTHO05D007682 7.1e-38 161.4 166 56.0
Prupe.6G224200 Prunus persica HOM05D005883 ORTHO05D007682 1.0e-36 157.5 131 64.1
Actinidia11997 Actinidia chinensis HOM05D005883 ORTHO05D007682 1.7e-36 156.8 137 62.8
Atru.chr3.169 Acer truncatum HOM05D005883 ORTHO05D007682 3.0e-36 156.0 137 61.3
Cpa.g.sc6.49 Carica papaya HOM05D005883 ORTHO05D007682 3.0e-36 156.0 139 62.6
Potri.007G052700 Populus trichocarpa HOM05D005883 ORTHO05D007682 3.0e-36 156.0 137 60.6
TWI09G1323 Tripterygium wilfordii HOM05D005883 ORTHO05D007682 3.0e-36 156.0 140 60.0
Atru.chr3.198 Acer truncatum HOM05D005883 ORTHO05D007682 5.1e-36 155.2 139 61.2
Haze_15313 Corylus avellana HOM05D005883 ORTHO05D007682 6.6e-36 154.8 166 53.0
Actinidia36443 Actinidia chinensis HOM05D005883 ORTHO05D007682 8.6e-36 154.5 137 61.3
CSS0036151 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 1.1e-35 154.1 137 60.6
CSS0047219 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 1.1e-35 154.1 137 60.6
Cfa004098 Carpinus fangiana HOM05D005883 ORTHO05D007682 1.5e-35 153.7 166 52.4
Manes.12G111900 Manihot esculenta HOM05D005883 ORTHO05D007682 1.9e-35 153.3 137 62.0
CiPaw.01G007400 Carya illinoinensis HOM05D005883 ORTHO05D007682 3.3e-35 152.5 131 61.8
HanXRQChr12g0376921 Helianthus annuus HOM05D005883 ORTHO05D007682 3.3e-35 152.5 139 60.4
vmacro05385 Vaccinium macrocarpon HOM05D005883 ORTHO05D007682 7.3e-35 151.4 137 59.1
Rhsim10G0103900 Rhododendron simsii HOM05D005883 ORTHO05D007682 1.2e-34 150.6 137 61.3
Dinv26902 Davidia involucrata HOM05D005883 ORTHO05D007682 1.6e-34 150.2 137 59.1
Sabra07G0046300 Salix brachista HOM05D005883 ORTHO05D007682 1.6e-34 150.2 137 58.4
Ciclev10025596m.g Citrus clementina HOM05D005883 ORTHO05D007682 2.1e-34 149.8 137 60.6
CSS0008300 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 2.8e-34 149.4 137 58.4
CSS0038059 Camellia sinensis var. sinensis HOM05D005883 ORTHO05D007682 3.6e-34 149.1 137 58.4
ECA246G3130 Erigeron canadensis HOM05D005883 ORTHO05D007682 6.2e-34 148.3 139 56.8
Lsat_1_v5_gn_3_88140 Lactuca sativa HOM05D005883 ORTHO05D007682 1.1e-33 147.5 139 56.8
Lj2g0016940 Lotus japonicus HOM05D005883 ORTHO05D007682 5.2e-33 145.2 131 61.8
Glyma.01G191800 Glycine max HOM05D005883 ORTHO05D007682 6.9e-33 144.8 131 62.6
Nn1g04621 Nelumbo nucifera HOM05D005883 ORTHO05D007682 9.0e-33 144.4 131 58.8
Ca_24720_v3 Cicer arietinum L. HOM05D001054 ORTHO05D007110 2.0e-32 143.3 131 61.1
MELO3C007612.2 Cucumis melo HOM05D005883 ORTHO05D007682 2.0e-32 143.3 131 61.1
Lalb_Chr09g0323471 Lupinus albus HOM05D005883 ORTHO05D007682 2.0e-32 143.3 131 59.5
Lj7A87T53 Lonicera japonica HOM05D005883 ORTHO05D007682 2.6e-32 142.9 135 57.8
Glyma.11G050300 Glycine max HOM05D005883 ORTHO05D007682 3.4e-32 142.5 131 61.8
Lalb_Chr16g0378771 Lupinus albus HOM05D005883 ORTHO05D007682 3.4e-32 142.5 131 59.5
Medtr5g016080 Medicago truncatula HOM05D005883 ORTHO05D007682 3.4e-32 142.5 131 61.1
TPR.G20942 Trifolium pratense HOM05D005883 ORTHO05D007682 3.4e-32 142.5 131 60.3
GSVIVG01000152001 Vitis vinifera HOM05D005883 ORTHO05D007682 3.4e-32 142.5 131 60.3
COL.COLO4_11536 Corchorus olitorius HOM05D005883 ORTHO05D007682 4.4e-32 142.1 167 52.1
CsaV3_6G043870 Cucumis sativus L. HOM05D005883 ORTHO05D007682 4.4e-32 142.1 131 59.5
ClCG01G017340 Citrullus lanatus HOM05D005883 ORTHO05D007682 5.8e-32 141.7 131 58.8
AUR62040273 Chenopodium quinoa HOM05D005883 ORTHO05D007682 7.6e-32 141.4 131 58.8
Psat2g170240 Pisum sativum HOM05D005883 ORTHO05D007682 7.6e-32 141.4 131 60.3
TAR625G0402 Trochodendron aralioides HOM05D005883 ORTHO05D007682 7.6e-32 141.4 130 57.7
VMungo1215G0629 Vigna mungo HOM05D005883 ORTHO05D007682 9.9e-32 141.0 131 59.5
Sed0006936 Sechium edule HOM05D005883 ORTHO05D007682 1.3e-31 140.6 131 58.0
Sc18g0004330 Simmondsia chinensis HOM05D005883 ORTHO05D007682 1.3e-31 140.6 166 50.6
Peaxi162Scf01526g00016 Petunia axillaris HOM05D005883 ORTHO05D007682 2.2e-31 139.8 137 55.5
Aqoxy6G02739 Aquilegia oxysepala HOM05D005883 ORTHO05D007682 2.9e-31 139.4 131 57.3
AUR62003972 Chenopodium quinoa HOM05D005883 ORTHO05D007682 2.9e-31 139.4 131 57.3
Duzib187G0578 Durio zibethinus HOM05D005883 ORTHO05D007682 2.9e-31 139.4 137 58.4
PSO675G6665 Papaver somniferum HOM05D005883 ORTHO05D007682 3.8e-31 139.0 132 59.1
DCAR_025777 Daucus carota HOM05D005883 ORTHO05D007682 4.9e-31 138.7 135 55.6
MSTRG.2834 Avicennia marina HOM05D005883 ORTHO05D007682 6.4e-31 138.3 137 54.7
Thecc.01G068700 Theobroma cacao HOM05D005883 ORTHO05D007682 6.4e-31 138.3 137 57.7
Phvul.002G013100 Phaseolus vulgaris HOM05D005883 ORTHO05D007682 8.4e-31 137.9 131 58.8
Gohir.A12G074700 Gossypium hirsutum HOM05D005883 ORTHO05D007682 1.1e-30 137.5 137 57.7
Nitab4.5_0009137g0020 Nicotiana tabacum HOM05D005883 ORTHO05D007682 1.4e-30 137.1 137 54.0
SGA_v2.0_scaffold13G06475 Striga asiatica HOM05D005883 ORTHO05D007682 2.4e-30 136.3 139 51.8
CANSAT01G1476 Cannabis sativa HOM05D005883 ORTHO05D007682 4.2e-30 135.6 131 57.3
Gohir.D12G072900 Gossypium hirsutum HOM05D005883 ORTHO05D007682 4.2e-30 135.6 137 56.9
EL10Ac6g15655 Beta vulgaris HOM05D005883 ORTHO05D007682 5.4e-30 135.2 166 49.4
Oeu040596.1 Olea europaea HOM05D005883 ORTHO05D007682 5.4e-30 135.2 131 56.5
arahy.Tifrunner.gnm1.ann1.L7VX2V Arachis hypogaea HOM05D005883 ORTHO05D007682 7.1e-30 134.8 131 58.0
Gohir.D11G206200 Gossypium hirsutum HOM05D005883 ORTHO05D007682 7.1e-30 134.8 139 55.4
Duzib147G0265 Durio zibethinus HOM05D005883 ORTHO05D007682 9.3e-30 134.4 143 58.0
Gorai.007G221400 Gossypium raimondii HOM05D005883 ORTHO05D007682 9.3e-30 134.4 139 55.4
PSO541G2663 Papaver somniferum HOM05D005883 ORTHO05D007682 9.3e-30 134.4 132 56.8
Gorai.008G080200 Gossypium raimondii HOM05D005883 ORTHO05D007682 1.2e-29 134.0 137 56.2
Nn5g30515 Nelumbo nucifera HOM05D005883 ORTHO05D007682 1.2e-29 134.0 137 54.0
TAR381G0554 Trochodendron aralioides HOM05D005883 ORTHO05D007682 1.6e-29 133.7 131 55.7
Migut.L00197 Erythranthe guttata HOM05D005883 ORTHO05D007682 2.7e-29 132.9 131 53.4
Gohir.A11G217100 Gossypium hirsutum HOM05D005883 ORTHO05D007682 6.0e-29 131.7 137 54.7
A04p17680 Brassica napus HOM05D005883 ORTHO05D033605 1.0e-28 131.0 77 87.0
Dinv30066 Davidia involucrata HOM05D005883 ORTHO05D007682 1.3e-28 130.6 116 59.5
CAN.G1075.14 Capsicum annuum HOM05D005883 ORTHO05D007682 1.7e-28 130.2 145 49.7
SalBow5G5022 Salvia bowleyana HOM05D005883 ORTHO05D007682 2.3e-28 129.8 139 53.2
Cc07_g06800 Coffea canephora HOM05D005883 ORTHO05D007682 3.0e-28 129.4 137 51.1
BraA04t17387Z Brassica rapa HOM05D005883 ORTHO05D033605 6.6e-28 128.3 77 85.7
Solyc02g092660.3 Solanum lycopersicum HOM05D005883 ORTHO05D007682 6.6e-28 128.3 137 52.6
PGSC0003DMG400024940 Solanum tuberosum HOM05D005883 ORTHO05D007682 6.6e-28 128.3 137 52.6
Eucgr.I00721 Eucalyptus grandis HOM05D005883 ORTHO05D007682 8.7e-28 127.9 131 53.4
unitig_46.g18307 Utricularia gibba HOM05D005883 ORTHO05D007682 8.7e-28 127.9 138 50.7
Eucgr.E01100 Eucalyptus grandis HOM05D005883 ORTHO05D007682 1.9e-27 126.7 131 51.9
Sopen02g037210 Solanum pennellii HOM05D005883 ORTHO05D007682 1.9e-27 126.7 137 52.6
HPP92_001545 Vanilla planifolia HOM05D005883 ORTHO05D007682 3.6e-26 122.5 133 54.9
arahy.Tifrunner.gnm1.ann1.6C4QPH Arachis hypogaea HOM05D005883 ORTHO05D007682 4.0e-25 119.0 131 53.4
MBI05_g33511_MAGBIO Magnolia biondii HOM05D005883 ORTHO05D007682 4.0e-25 119.0 131 49.6
ATR0810G056 Amborella trichopoda HOM05D005883 ORTHO05D007682 1.7e-23 113.6 148 40.5
Os08g0113800 Oryza sativa ssp. japonica HOM05D005883 ORTHO05D007682 1.7e-23 113.6 140 47.1
arahy.Tifrunner.gnm1.ann1.07YYGV Arachis hypogaea HOM05D005883 ORTHO05D007682 1.9e-22 110.2 111 56.8
HPP92_020944 Vanilla planifolia HOM05D005883 ORTHO05D007682 4.2e-22 109.0 138 47.8
Zm00001eb173940 Zea mays HOM05D005883 ORTHO05D007682 9.3e-22 107.8 129 48.1
arahy.Tifrunner.gnm1.ann1.R8KG7J Arachis hypogaea HOM05D005883 ORTHO05D007682 6.0e-21 105.1 111 55.0
Ah.02g125640 Amaranthus hybridus HOM05D005883 ORTHO05D007682 5.1e-20 102.1 110 51.8
SEGI_20032 Sequoiadendron giganteum HOM05D005883 ORTHO05D007682 8.7e-20 101.3 129 45.7
Hund16381 Selenicereus undatus HOM05D005883 ORTHO05D007682 1.1e-17 94.4 131 45.0
Pp3c4_17400 Physcomitrium patens HOM05D002361 ORTHO05D007682 8.4e-15 84.7 129 38.8
Pp3c20_4860 Physcomitrium patens HOM05D002361 ORTHO05D007682 1.9e-14 83.6 128 39.1
Mapoly0138s0039 Marchantia polymorpha HOM05D002361 ORTHO05D007682 2.4e-14 83.2 128 37.5
Peaxi162Scf00264g00325 Petunia axillaris HOM05D005883 ORTHO05D007682 1.0e-12 77.8 67 59.7
Nitab4.5_0010920g0010 Nicotiana tabacum HOM05D005883 ORTHO05D007682 3.0e-12 76.3 67 58.2
Nitab4.5_0001119g0030 Nicotiana tabacum HOM05D005883 ORTHO05D007682 3.3e-11 72.8 67 55.2
AagrBONN_evm.TU.Sc2ySwM_368.2385 Anthoceros agrestis HOM05D005883 ORTHO05D007682 2.0e-08 63.5 166 30.1
AagrBONN_evm.TU.Sc2ySwM_369.574 Anthoceros agrestis HOM05D002361 ORTHO05D007682 2.6e-08 63.2 144 32.6
CDE05G2453 Ceratophyllum demersum HOM05D005883 ORTHO05D007682 7.6e-08 61.6 52 57.7
Oeu054182.1 Olea europaea HOM05D005883 ORTHO05D007682 8.4e-07 58.2 124 36.3


User provided reference genes

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