Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p52150 Brassica napus HOM05D027742 ORTHO05D027054 3.4e-145 518.5 289 100.0
BcaC02g08594 Brassica carinata HOM05D027742 ORTHO05D027054 1.5e-52 210.7 206 63.1
BraA09t38523Z Brassica rapa HOM05D027742 ORTHO05D027054 9.1e-50 201.4 239 51.5
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 1.9e-26 124.0 217 41.5
BcaC04g19602 Brassica carinata HOM05D027742 ORTHO05D027054 4.4e-20 102.8 133 49.6
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 1.3e-16 91.3 173 38.7
BcaB06g26119 Brassica carinata HOM05D001239 ORTHO05D011709 3.6e-14 83.2 210 32.4
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 1.1e-13 81.6 194 37.1
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 1.4e-13 81.3 171 36.8
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 2.4e-13 80.5 181 33.1
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 5.2e-13 79.3 200 36.0
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 4.4e-12 76.3 172 33.7
CARHR154060 Cardamine hirsuta HOM05D001239 ORTHO05D011709 7.6e-12 75.5 69 58.0
C02p57570 Brassica napus HOM05D001239 ORTHO05D011709 2.2e-11 73.9 110 43.6
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 3.8e-11 73.2 154 36.4
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 3.8e-11 73.2 120 40.0
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 4.9e-11 72.8 191 33.5
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 8.4e-11 72.0 184 33.7
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 1.9e-10 70.9 171 35.1
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 3.2e-10 70.1 72 54.2
BolC6t35474H Brassica oleracea HOM05D016295 ORTHO05D017554 7.1e-10 68.9 135 33.3
BcaC06g33595 Brassica carinata HOM05D000003 ORTHO05D000006 9.3e-10 68.6 213 31.5
BcaC08g43076 Brassica carinata HOM05D016295 ORTHO05D017554 1.2e-09 68.2 175 29.7
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 1.6e-09 67.8 185 32.4
BcaB08g34667 Brassica carinata HOM05D000441 ORTHO05D017554 2.7e-09 67.0 155 35.5
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 3.5e-09 66.6 72 51.4
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 3.5e-09 66.6 78 48.7
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 6.0e-09 65.9 90 47.8
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 7.8e-09 65.5 234 29.9
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 7.8e-09 65.5 174 33.9
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 1.3e-08 64.7 101 41.6
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 3.0e-08 63.5 146 34.2
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 3.9e-08 63.2 231 30.3
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 5.1e-08 62.8 140 32.9
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 5.1e-08 62.8 140 32.9
BcaC03g17089 Brassica carinata HOM05D025306 ORTHO05D011709 6.6e-08 62.4 169 32.0
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 6.6e-08 62.4 173 32.4
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 8.7e-08 62.0 257 30.4
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 1.1e-07 61.6 206 32.5
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 1.5e-07 61.2 161 32.3
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 1.5e-07 61.2 105 40.0
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-07 60.8 181 29.8
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 1.9e-07 60.8 196 28.1
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 2.5e-07 60.5 183 32.2
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 2.5e-07 60.5 73 45.2
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 2.5e-07 60.5 183 32.2
C07p04310 Brassica napus HOM05D001239 ORTHO05D011709 2.5e-07 60.5 141 36.2
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 2.5e-07 60.5 73 45.2
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 3.3e-07 60.1 204 28.9
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 5.6e-07 59.3 101 40.6
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 5.6e-07 59.3 235 29.8
BolC8t47551H Brassica oleracea HOM05D001239 ORTHO05D024427 5.6e-07 59.3 105 39.0
BcaC03g14187 Brassica carinata HOM05D001239 ORTHO05D011709 1.6e-06 57.8 63 52.4
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 1.6e-06 57.8 147 33.3
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 1.6e-06 57.8 100 39.0
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 2.1e-06 57.4 119 31.9
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 2.1e-06 57.4 122 34.4
C04p33720 Brassica napus HOM05D031458 ORTHO05D027524 3.6e-06 56.6 51 51.0
BolC4t24940H Brassica oleracea HOM05D031458 ORTHO05D027524 3.6e-06 56.6 51 51.0
BolC8t49935H Brassica oleracea HOM05D001239 ORTHO05D011709 3.6e-06 56.6 96 39.6
A05p24750 Brassica napus HOM05D002138 ORTHO05D002106 4.8e-06 56.2 51 54.9
BcaC05g27311 Brassica carinata HOM05D001239 ORTHO05D011709 6.2e-06 55.8 127 37.0
BcaC04g21866 Brassica carinata HOM05D011670 ORTHO05D012489 8.1e-06 55.5 182 28.6
A03p63670 Brassica napus HOM05D001239 ORTHO05D011709 8.1e-06 55.5 52 50.0
BraA03t15438Z Brassica rapa HOM05D001239 ORTHO05D011709 8.1e-06 55.5 52 50.0


User provided reference genes

Program Settings