Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p52130 Brassica napus HOM05D025779 ORTHO05D033398 2.9e-24 114.4 57 100.0
BolC4t26789H Brassica oleracea HOM05D025779 ORTHO05D033398 2.9e-24 114.4 57 100.0
BraA04t17360Z Brassica rapa HOM05D025779 ORTHO05D033398 3.2e-23 110.9 57 96.5
A04p17340 Brassica napus HOM05D025779 ORTHO05D097812 7.6e-17 89.7 57 80.7
Nitab4.5_0008614g0020 Nicotiana tabacum HOM05D000029 ORTHO05D002162 2.2e-11 71.6 60 63.3
CARHR056180 Cardamine hirsuta HOM05D000029 ORTHO05D002162 1.1e-10 69.3 57 64.9
AL8G41170 Arabidopsis lyrata HOM05D000029 ORTHO05D002162 6.9e-10 66.6 57 64.9
BcaB05g23582 Brassica carinata HOM05D000029 ORTHO05D002162 6.9e-10 66.6 57 64.9
HPP92_027301 Vanilla planifolia HOM05D000029 ORTHO05D002162 9.1e-10 66.2 60 61.7
AT5G63930 Arabidopsis thaliana HOM05D000029 ORTHO05D002162 1.5e-09 65.5 57 63.2
BcaC03g16018 Brassica carinata HOM05D000029 ORTHO05D002162 7.7e-09 63.2 57 63.2
A02p23920 Brassica napus HOM05D000029 ORTHO05D002162 7.7e-09 63.2 57 63.2
C02p37710 Brassica napus HOM05D000029 ORTHO05D002162 7.7e-09 63.2 57 63.2
BolC2t09790H Brassica oleracea HOM05D000029 ORTHO05D002162 7.7e-09 63.2 57 63.2
BraA02t07384Z Brassica rapa HOM05D000029 ORTHO05D002162 2.9e-08 61.2 57 61.4
Carub.0008s2469 Capsella rubella HOM05D000029 ORTHO05D002162 1.9e-07 58.5 37 81.1
Dinv09687 Davidia involucrata HOM05D000029 ORTHO05D002162 5.5e-07 57.0 57 57.9


User provided reference genes

Program Settings