Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08628 Brassica carinata HOM05D007087 ORTHO05D008968 2.9e-39 164.9 87 100.0
A04p17120 Brassica napus HOM05D007087 ORTHO05D008968 2.9e-39 164.9 87 100.0
C04p51930 Brassica napus HOM05D007087 ORTHO05D008968 2.9e-39 164.9 87 100.0
BolC4t26765H Brassica oleracea HOM05D007087 ORTHO05D008968 2.9e-39 164.9 87 100.0
BraA04t17341Z Brassica rapa HOM05D007087 ORTHO05D008968 2.9e-39 164.9 87 100.0
AL4G12190 Arabidopsis lyrata HOM05D007087 ORTHO05D008968 2.7e-37 158.3 87 98.9
AT2G22640 Arabidopsis thaliana HOM05D007087 ORTHO05D008968 2.7e-37 158.3 87 98.9
BcaB06g27810 Brassica carinata HOM05D007087 ORTHO05D008968 2.7e-37 158.3 87 98.9
Carub.0004s0180 Capsella rubella HOM05D007087 ORTHO05D008968 2.7e-37 158.3 87 98.9
Thhalv10000402m.g Eutrema salsugineum HOM05D007087 ORTHO05D008968 2.7e-37 158.3 87 98.9
Hund16615 Selenicereus undatus HOM05D007087 ORTHO05D008968 5.6e-35 150.6 84 90.5
THA.LOC104807661 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 5.6e-35 150.6 85 94.1
THA.LOC104824923 Tarenaya hassleriana HOM05D007087 ORTHO05D008968 5.6e-35 150.6 87 92.0
Cfa006833 Carpinus fangiana HOM05D007087 ORTHO05D008968 7.3e-35 150.2 87 92.0
Hma1.2p1_0080F.1_g042080 Hydrangea macrophylla HOM05D007087 ORTHO05D008968 7.3e-35 150.2 87 92.0
COL.COLO4_11683 Corchorus olitorius HOM05D007087 ORTHO05D008968 2.1e-34 148.7 87 90.8
Aqoxy5G01405 Aquilegia oxysepala HOM05D007087 ORTHO05D008968 2.8e-34 148.3 88 88.6
QL06p037367 Quercus lobata HOM05D007087 ORTHO05D008968 2.8e-34 148.3 86 90.7
arahy.Tifrunner.gnm1.ann1.6G1T2R Arachis hypogaea HOM05D007087 ORTHO05D008968 3.6e-34 147.9 87 89.7
arahy.Tifrunner.gnm1.ann1.NU08EI Arachis hypogaea HOM05D007087 ORTHO05D008968 3.6e-34 147.9 87 89.7
Ca_13466_v3 Cicer arietinum L. HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
Glyma.01G020200 Glycine max HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
Gohir.A11G208700 Gossypium hirsutum HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
Gohir.D11G214800 Gossypium hirsutum HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
Lj2g0010143 Lotus japonicus HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
Medtr5g030935 Medicago truncatula HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
Phvul.002G143500 Phaseolus vulgaris HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
Psat2g134040 Pisum sativum HOM05D007087 ORTHO05D008968 4.7e-34 147.5 87 89.7
Sc16g0000740 Simmondsia chinensis HOM05D007087 ORTHO05D008968 4.7e-34 147.5 84 91.7
Cpa.g.sc129.16 Carica papaya HOM05D007087 ORTHO05D008968 6.2e-34 147.1 87 90.8
ECA232G4432 Erigeron canadensis HOM05D007087 ORTHO05D008968 6.2e-34 147.1 87 89.7
HanXRQChr09g0262861 Helianthus annuus HOM05D007087 ORTHO05D008968 6.2e-34 147.1 87 89.7
HanXRQChr11g0324431 Helianthus annuus HOM05D007087 ORTHO05D008968 8.0e-34 146.7 87 89.7
Lsat_1_v5_gn_4_156341 Lactuca sativa HOM05D007087 ORTHO05D008968 8.0e-34 146.7 87 89.7
TWI53G1267 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 8.0e-34 146.7 87 90.8
TWI77G0839 Tripterygium wilfordii HOM05D007087 ORTHO05D008968 8.0e-34 146.7 87 89.7
Actinidia16395 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.1e-33 146.4 87 88.5
Manes.12G121500 Manihot esculenta HOM05D007087 ORTHO05D008968 1.1e-33 146.4 87 89.7
TPR.G37071 Trifolium pratense HOM05D007087 ORTHO05D008968 1.1e-33 146.4 87 88.5
MD01G1044400 Malus domestica HOM05D007087 ORTHO05D008968 1.4e-33 146.0 85 89.4
Prupe.6G209300 Prunus persica HOM05D007087 ORTHO05D008968 1.4e-33 146.0 85 89.4
TAR376G1208 Trochodendron aralioides HOM05D007087 ORTHO05D008968 1.4e-33 146.0 84 90.5
Glyma.09G202200 Glycine max HOM05D007087 ORTHO05D008968 1.8e-33 145.6 87 88.5
MBI16_g36494_MAGBIO Magnolia biondii HOM05D007087 ORTHO05D008968 1.8e-33 145.6 85 88.2
EL10Ac6g13306 Beta vulgaris HOM05D007087 ORTHO05D008968 2.3e-33 145.2 84 89.3
CSS0037594 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 2.3e-33 145.2 84 90.5
CSS0044951 Camellia sinensis var. sinensis HOM05D007087 ORTHO05D008968 2.3e-33 145.2 84 90.5
CiPaw.08G145100 Carya illinoinensis HOM05D007087 ORTHO05D008968 2.3e-33 145.2 82 90.2
Dinv27003 Davidia involucrata HOM05D007087 ORTHO05D008968 2.3e-33 145.2 87 88.5
Duzib264G0202 Durio zibethinus HOM05D007087 ORTHO05D008968 2.3e-33 145.2 84 90.5
Eucgr.I00598 Eucalyptus grandis HOM05D007087 ORTHO05D008968 2.3e-33 145.2 87 88.5
Eucgr.I00599 Eucalyptus grandis HOM05D007087 ORTHO05D008968 2.3e-33 145.2 87 88.5
FvH4_1g19040 Fragaria vesca HOM05D007087 ORTHO05D008968 2.3e-33 145.2 85 89.4
FAN23G1122 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.3e-33 145.2 85 89.4
FAN26G0060 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.3e-33 145.2 85 89.4
FAN28G2302 Fragaria x ananassa HOM05D007087 ORTHO05D008968 2.3e-33 145.2 85 89.4
Gorai.007G230500 Gossypium raimondii HOM05D007087 ORTHO05D008968 2.3e-33 145.2 85 89.4
PGR102G1803 Punica granatum HOM05D007087 ORTHO05D008968 2.3e-33 145.2 87 88.5
RcHm_v2.0_Chr2g0110041 Rosa chinensis HOM05D007087 ORTHO05D008968 2.3e-33 145.2 85 89.4
Lalb_Chr05g0216201 Lupinus albus HOM05D007087 ORTHO05D008968 3.1e-33 144.8 87 87.4
Thecc.01G084300 Theobroma cacao HOM05D007087 ORTHO05D008968 3.1e-33 144.8 87 88.5
CiPaw.07G042900 Carya illinoinensis HOM05D007087 ORTHO05D008968 5.2e-33 144.1 87 88.5
Ciclev10027006m.g Citrus clementina HOM05D007087 ORTHO05D008968 5.2e-33 144.1 87 88.5
MELO3C007697.2 Cucumis melo HOM05D007087 ORTHO05D008968 5.2e-33 144.1 87 88.5
Lalb_Chr09g0325791 Lupinus albus HOM05D007087 ORTHO05D008968 5.2e-33 144.1 87 88.5
Oeu024989.2 Olea europaea HOM05D007087 ORTHO05D008968 5.2e-33 144.1 87 86.2
vmacro18037 Vaccinium macrocarpon HOM05D007087 ORTHO05D008968 6.8e-33 143.7 87 88.5
Duzib147G0219 Durio zibethinus HOM05D007087 ORTHO05D008968 8.9e-33 143.3 84 89.3
TAR625G1164 Trochodendron aralioides HOM05D007087 ORTHO05D008968 8.9e-33 143.3 84 89.3
Actinidia22784 Actinidia chinensis HOM05D007087 ORTHO05D008968 1.2e-32 142.9 87 86.2
Atru.chr3.1157 Acer truncatum HOM05D007087 ORTHO05D008968 1.5e-32 142.5 84 89.3
Atru.chr3.1173 Acer truncatum HOM05D007087 ORTHO05D008968 1.5e-32 142.5 84 89.3
AUR62005889 Chenopodium quinoa HOM05D007087 ORTHO05D008968 1.5e-32 142.5 84 86.9
Migut.L00449 Erythranthe guttata HOM05D007087 ORTHO05D008968 3.4e-32 141.4 80 88.8
PSO017G4672 Papaver somniferum HOM05D007087 ORTHO05D008968 2.2e-31 138.7 85 83.5
PSO478G0358 Papaver somniferum HOM05D007087 ORTHO05D008968 2.2e-31 138.7 85 83.5
A09p57350 Brassica napus HOM05D007087 ORTHO05D008968 6.4e-31 137.1 88 87.5
BraA09t41128Z Brassica rapa HOM05D007087 ORTHO05D008968 6.4e-31 137.1 88 87.5
CDE01G0651 Ceratophyllum demersum HOM05D007087 ORTHO05D008968 8.3e-31 136.7 87 81.6
Potri.014G010000 Populus trichocarpa HOM05D007087 ORTHO05D008968 1.9e-30 135.6 92 77.2
Sp4g01675 Schrenkiella parvula HOM05D007087 ORTHO05D008968 7.0e-30 133.7 73 98.6
Zm00001eb259430 Zea mays HOM05D007087 ORTHO05D008968 2.7e-29 131.7 80 81.2
CAN.G11.24 Capsicum annuum HOM05D007087 ORTHO05D008968 1.3e-28 129.4 84 79.8
BcaB08g35111 Brassica carinata HOM05D007087 ORTHO05D008968 1.9e-27 125.6 94 77.7
CsaV3_6G044750 Cucumis sativus L. HOM05D007087 ORTHO05D008968 1.9e-27 125.6 73 90.4
Sabra14G0004400 Salix brachista HOM05D007087 ORTHO05D008968 4.3e-27 124.4 73 83.6
ATR0800G005 Amborella trichopoda HOM05D007087 ORTHO05D008968 9.5e-27 123.2 79 82.3
Sabra14G0001400 Salix brachista HOM05D007087 ORTHO05D008968 1.6e-26 122.5 75 81.3
Os02g0829900 Oryza sativa ssp. japonica HOM05D007087 ORTHO05D008968 2.8e-26 121.7 85 75.3
Dinv36975 Davidia involucrata HOM05D007087 ORTHO05D008968 3.6e-26 121.3 74 86.5
COL.COLO4_02760 Corchorus olitorius HOM05D007087 ORTHO05D008968 1.1e-25 119.8 84 81.0
Solyc03g043720.4 Solanum lycopersicum HOM05D007087 ORTHO05D008968 1.4e-25 119.4 84 76.2
Sopen03g007570 Solanum pennellii HOM05D007087 ORTHO05D008968 1.4e-25 119.4 84 76.2
PGSC0003DMG400016688 Solanum tuberosum HOM05D007087 ORTHO05D008968 1.4e-25 119.4 84 76.2
Peaxi162Scf00118g00061 Petunia axillaris HOM05D007087 ORTHO05D008968 2.3e-25 118.6 84 76.2
ClCG01G018190 Citrullus lanatus HOM05D007087 ORTHO05D008968 4.0e-25 117.9 74 86.5
Cc07_g07910 Coffea canephora HOM05D007087 ORTHO05D008968 5.2e-25 117.5 84 75.0
Nitab4.5_0000465g0110 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.5e-24 115.9 84 73.8
Sed0015245 Sechium edule HOM05D007087 ORTHO05D008968 5.8e-24 114.0 87 71.3
Pp3c8_2740 Physcomitrium patens HOM05D007087 ORTHO05D008968 1.0e-20 103.2 74 71.6
Mapoly0132s0041 Marchantia polymorpha HOM05D007087 ORTHO05D008968 5.1e-20 100.9 72 69.4
AagrBONN_evm.TU.Sc2ySwM_344.2813 Anthoceros agrestis HOM05D007087 ORTHO05D008968 8.6e-20 100.1 76 63.2
SMO144G0170 Selaginella moellendorffii HOM05D007087 ORTHO05D008968 4.0e-17 91.3 75 61.3
Nitab4.5_0008656g0010 Nicotiana tabacum HOM05D007087 ORTHO05D008968 1.2e-16 89.7 84 63.1
Nn5g29785 Nelumbo nucifera HOM05D007087 ORTHO05D008968 1.7e-15 85.9 65 73.8
Aa31LG7G14170 Aethionema arabicum HOM05D007087 ORTHO05D008968 8.4e-15 83.6 45 95.6
FAN19G2569 Fragaria x ananassa HOM05D007087 ORTHO05D008968 1.1e-14 83.2 49 85.7
Actinidia36375 Actinidia chinensis HOM05D007087 ORTHO05D008968 3.3e-11 71.6 45 80.0
unitig_32.g10648 Utricularia gibba HOM05D007087 ORTHO05D008968 5.6e-11 70.9 45 75.6
SEGI_40703 Sequoiadendron giganteum HOM05D007087 ORTHO05D008968 4.0e-09 64.7 64 43.8


User provided reference genes

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