Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p50070 Brassica napus HOM05D005049 ORTHO05D006032 1.3e-96 356.3 174 100.0
A04p15750 Brassica napus HOM05D005049 ORTHO05D006032 2.5e-42 176.0 151 62.9
BraA04t17209Z Brassica rapa HOM05D005049 ORTHO05D006032 2.5e-42 176.0 151 62.9
A04p13200 Brassica napus HOM05D005049 ORTHO05D006032 2.7e-36 156.0 157 53.5
BraA04t16979Z Brassica rapa HOM05D005049 ORTHO05D006032 2.7e-36 156.0 157 53.5
Thhalv10027764m.g Eutrema salsugineum HOM05D005049 ORTHO05D006032 5.9e-36 154.8 157 52.9
BcaB06g27470 Brassica carinata HOM05D005049 ORTHO05D006032 1.0e-35 154.1 157 53.5
C04p46950 Brassica napus HOM05D005049 ORTHO05D006032 1.0e-35 154.1 157 52.9
Sp7g01660 Schrenkiella parvula HOM05D005049 ORTHO05D006032 1.0e-35 154.1 155 54.2
Aa31LG9G1340 Aethionema arabicum HOM05D005049 ORTHO05D006032 2.2e-35 152.9 155 53.5
AT5G40280 Arabidopsis thaliana HOM05D005049 ORTHO05D006032 8.5e-35 151.0 156 51.9
BolC4t26289H Brassica oleracea HOM05D005049 ORTHO05D006032 8.5e-35 151.0 165 50.3
Carub.0007s3535 Capsella rubella HOM05D005049 ORTHO05D006032 2.5e-34 149.4 156 51.9
CARHR261810 Cardamine hirsuta HOM05D005049 ORTHO05D006032 1.0e-32 144.1 156 51.3
THA.LOC104805397 Tarenaya hassleriana HOM05D005049 ORTHO05D006032 1.0e-32 144.1 163 49.7
BcaB06g27754 Brassica carinata HOM05D005049 ORTHO05D006032 1.2e-31 140.6 128 59.4
GSVIVG01032478001 Vitis vinifera HOM05D005049 ORTHO05D006032 2.9e-27 125.9 147 46.3
Lsat_1_v5_gn_2_92181 Lactuca sativa HOM05D005049 ORTHO05D006032 1.5e-26 123.6 134 48.5
CANSAT64G0408 Cannabis sativa HOM05D005049 ORTHO05D006032 2.5e-26 122.9 151 45.0
arahy.Tifrunner.gnm1.ann1.B7LRKU Arachis hypogaea HOM05D005049 ORTHO05D006032 9.5e-26 120.9 135 44.4
CSS0003936 Camellia sinensis var. sinensis HOM05D005049 ORTHO05D006032 1.6e-25 120.2 147 45.6
Psat1g056840 Pisum sativum HOM05D005049 ORTHO05D006032 1.6e-25 120.2 147 42.9
TAR622G0573 Trochodendron aralioides HOM05D005049 ORTHO05D006032 2.1e-25 119.8 147 44.2
MELO3C009957.2 Cucumis melo HOM05D005049 ORTHO05D006032 2.8e-25 119.4 156 43.6
CsaV3_3G042430 Cucumis sativus L. HOM05D005049 ORTHO05D006032 3.6e-25 119.0 156 43.6
Dinv35060 Davidia involucrata HOM05D005049 ORTHO05D006032 4.7e-25 118.6 147 44.9
Prupe.3G284100 Prunus persica HOM05D005049 ORTHO05D006032 4.7e-25 118.6 147 44.2
arahy.Tifrunner.gnm1.ann1.41NV30 Arachis hypogaea HOM05D005049 ORTHO05D006032 6.1e-25 118.2 135 43.7
arahy.Tifrunner.gnm1.ann1.EYLE23 Arachis hypogaea HOM05D005049 ORTHO05D006032 6.1e-25 118.2 135 43.7
Medtr6g007165 Medicago truncatula HOM05D005049 ORTHO05D006032 1.0e-24 117.5 147 41.5
Eucgr.I01812 Eucalyptus grandis HOM05D005049 ORTHO05D006032 1.4e-24 117.1 159 41.5
Hma1.2p1_0858F.1_g229450 Hydrangea macrophylla HOM05D005049 ORTHO05D006032 1.4e-24 117.1 149 43.6
RcHm_v2.0_Chr2g0171441 Rosa chinensis HOM05D005049 ORTHO05D006032 1.4e-24 117.1 147 44.2
Glyma.06G185500 Glycine max HOM05D005049 ORTHO05D006032 2.3e-24 116.3 143 44.1
PGR142G2968 Punica granatum HOM05D005049 ORTHO05D006032 3.0e-24 115.9 149 43.6
Actinidia35742 Actinidia chinensis HOM05D005049 ORTHO05D006032 6.8e-24 114.8 147 44.2
HanXRQChr07g0198731 Helianthus annuus HOM05D005049 ORTHO05D006032 6.8e-24 114.8 148 43.2
Nitab4.5_0003337g0090 Nicotiana tabacum HOM05D005049 ORTHO05D006032 8.9e-24 114.4 169 40.8
Gohir.A09G026200 Gossypium hirsutum HOM05D005049 ORTHO05D006032 1.2e-23 114.0 147 44.2
Thecc.04G008900 Theobroma cacao HOM05D005049 ORTHO05D006032 1.5e-23 113.6 147 41.5
Lj9C583G13 Lonicera japonica HOM05D005049 ORTHO05D006032 2.0e-23 113.2 118 48.3
Sopen02g031640 Solanum pennellii HOM05D005049 ORTHO05D006032 2.0e-23 113.2 143 44.8
Actinidia36083 Actinidia chinensis HOM05D005049 ORTHO05D006032 2.6e-23 112.8 148 43.2
ECA238G2197 Erigeron canadensis HOM05D005049 ORTHO05D006032 2.6e-23 112.8 148 43.2
Glyma.13G168600 Glycine max HOM05D005049 ORTHO05D006032 2.6e-23 112.8 147 42.2
Sc07g0003030 Simmondsia chinensis HOM05D005049 ORTHO05D006032 2.6e-23 112.8 156 41.7
PGSC0003DMG400000525 Solanum tuberosum HOM05D005049 ORTHO05D006032 2.6e-23 112.8 143 44.1
Atru.chr6.2298 Acer truncatum HOM05D005049 ORTHO05D006032 3.4e-23 112.5 157 40.8
Nn4g22794 Nelumbo nucifera HOM05D005049 ORTHO05D006032 3.4e-23 112.5 147 41.5
Gorai.006G029800 Gossypium raimondii HOM05D005049 ORTHO05D006032 4.4e-23 112.1 147 43.5
PSO017G6025 Papaver somniferum HOM05D005049 ORTHO05D006032 4.4e-23 112.1 160 40.6
Sed0008163 Sechium edule HOM05D005049 ORTHO05D006032 4.4e-23 112.1 156 42.3
Nitab4.5_0005176g0050 Nicotiana tabacum HOM05D005049 ORTHO05D006032 5.7e-23 111.7 77 66.2
CAN.G206.31 Capsicum annuum HOM05D005049 ORTHO05D006032 7.5e-23 111.3 148 43.2
Sabra17G0060100 Salix brachista HOM05D005049 ORTHO05D006032 7.5e-23 111.3 147 42.2
Solyc02g086870.4 Solanum lycopersicum HOM05D005049 ORTHO05D006032 7.5e-23 111.3 143 44.1
VMungo0464G1607 Vigna mungo HOM05D005049 ORTHO05D006032 9.8e-23 110.9 147 41.5
Aqoxy3G01017 Aquilegia oxysepala HOM05D005049 ORTHO05D006032 1.3e-22 110.5 147 40.8
Duzib264G0847 Durio zibethinus HOM05D005049 ORTHO05D006032 1.3e-22 110.5 147 41.5
Phvul.004G014500 Phaseolus vulgaris HOM05D005049 ORTHO05D006032 1.7e-22 110.2 147 40.8
Potri.017G073200 Populus trichocarpa HOM05D005049 ORTHO05D006032 1.7e-22 110.2 147 40.8
TPR.G2274 Trifolium pratense HOM05D005049 ORTHO05D006032 1.7e-22 110.2 147 39.5
AUR62040116 Chenopodium quinoa HOM05D005049 ORTHO05D006032 2.2e-22 109.8 117 47.9
Manes.17G121600 Manihot esculenta HOM05D005049 ORTHO05D006032 2.2e-22 109.8 148 41.9
Cpa.g.sc39.89 Carica papaya HOM05D005049 ORTHO05D006032 2.8e-22 109.4 155 40.0
QL02p076639 Quercus lobata HOM05D005049 ORTHO05D006032 2.8e-22 109.4 143 41.3
Ciclev10015290m.g Citrus clementina HOM05D005049 ORTHO05D006032 3.7e-22 109.0 147 42.2
Lj2g0009991 Lotus japonicus HOM05D005049 ORTHO05D006032 3.7e-22 109.0 172 39.0
CiPaw.03G037900 Carya illinoinensis HOM05D005049 ORTHO05D006032 4.9e-22 108.6 143 41.3
Duzib147G1079 Durio zibethinus HOM05D005049 ORTHO05D006032 4.9e-22 108.6 155 40.6
Cfa007428 Carpinus fangiana HOM05D005049 ORTHO05D006032 8.3e-22 107.8 156 38.5
MD17G1034700 Malus domestica HOM05D005049 ORTHO05D006032 8.3e-22 107.8 147 41.5
Ah.11g045070 Amaranthus hybridus HOM05D005049 ORTHO05D006032 3.1e-21 105.9 147 40.1
ATR0730G137 Amborella trichopoda HOM05D005049 ORTHO05D006032 3.1e-21 105.9 148 39.2
Cc07_g02260 Coffea canephora HOM05D005049 ORTHO05D006032 3.1e-21 105.9 64 70.3
EL10Ac2g02398 Beta vulgaris HOM05D005049 ORTHO05D006032 4.1e-21 105.5 147 40.1
FAN14G5348 Fragaria x ananassa HOM05D005049 ORTHO05D006032 4.1e-21 105.5 143 40.6
SGA_v2.0_scaffold66G22479 Striga asiatica HOM05D005049 ORTHO05D006032 4.1e-21 105.5 147 38.8
TWI12G0306 Tripterygium wilfordii HOM05D005049 ORTHO05D006032 4.1e-21 105.5 64 70.3
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 1.2e-20 104.0 156 39.1
SGA_v2.0_scaffold205G41694 Striga asiatica HOM05D005049 ORTHO05D006032 1.6e-20 103.6 143 39.9
Migut.H00120 Erythranthe guttata HOM05D005049 ORTHO05D006032 2.0e-20 103.2 147 38.8
MBI16_g40725_MAGBIO Magnolia biondii HOM05D005049 ORTHO05D006032 2.0e-20 103.2 143 40.6
PSO478G2829 Papaver somniferum HOM05D005049 ORTHO05D006032 5.9e-20 101.7 81 56.8
unitig_52.g17670 Utricularia gibba HOM05D005049 ORTHO05D006032 7.8e-20 101.3 68 61.8
Haze_14669 Corylus avellana HOM05D005049 ORTHO05D006032 1.0e-19 100.9 77 57.1
Prupe.6G347800 Prunus persica HOM05D005049 ORTHO05D006032 1.0e-19 100.9 147 38.8
Zm00001eb153900 Zea mays HOM05D005049 ORTHO05D006032 1.0e-19 100.9 146 37.0
FvH4_6g50640 Fragaria vesca HOM05D005049 ORTHO05D006032 1.3e-19 100.5 155 38.1
Oeu004708.3 Olea europaea HOM05D005049 ORTHO05D006032 1.7e-19 100.1 70 60.0
AUR62032496 Chenopodium quinoa HOM05D005049 ORTHO05D006032 2.3e-19 99.8 129 43.4
FAN14G3165 Fragaria x ananassa HOM05D005049 ORTHO05D006032 3.8e-19 99.0 143 39.2
Lalb_Chr02g0160341 Lupinus albus HOM05D005049 ORTHO05D006032 6.6e-19 98.2 147 38.1
MSTRG.3171 Avicennia marina HOM05D005049 ORTHO05D006032 3.3e-18 95.9 147 36.1
HPP92_021346 Vanilla planifolia HOM05D005049 ORTHO05D006032 9.5e-18 94.4 148 35.1
FAN02G4030 Fragaria x ananassa HOM05D005049 ORTHO05D006032 2.1e-17 93.2 76 55.3
HPP92_021351 Vanilla planifolia HOM05D005049 ORTHO05D006032 2.1e-17 93.2 143 35.7
SMO172G0207 Selaginella moellendorffii HOM05D005049 ORTHO05D006032 6.8e-16 88.2 156 32.1
Hund02271 Selenicereus undatus HOM05D005049 ORTHO05D006032 3.4e-15 85.9 55 69.1
DCAR_015040 Daucus carota HOM05D005049 ORTHO05D006032 2.9e-14 82.8 97 47.4
Ca_04197_v3 Cicer arietinum L. HOM05D005049 ORTHO05D006032 3.7e-14 82.4 114 39.5
Pp3c14_3780 Physcomitrium patens HOM05D005049 ORTHO05D006032 4.9e-14 82.0 154 31.8
AagrBONN_evm.TU.Sc2ySwM_117.2022 Anthoceros agrestis HOM05D005049 ORTHO05D006032 1.6e-12 77.0 64 50.0
Mapoly0123s0027 Marchantia polymorpha HOM05D005049 ORTHO05D006032 1.6e-12 77.0 153 32.7
CBR_g12691 Chara braunii HOM05D005049 ORTHO05D006032 2.0e-12 76.6 64 46.9
MD09G1034200 Malus domestica HOM05D005049 ORTHO05D006032 4.6e-12 75.5 152 34.2
Hma1.2p1_0802F.1_g220350 Hydrangea macrophylla HOM05D005049 ORTHO05D006032 7.8e-12 74.7 52 65.4
vmacro05822 Vaccinium macrocarpon HOM05D005049 ORTHO05D006032 1.1e-10 70.9 35 85.7
MCO05G513 Micromonas commoda HOM05D005049 ORTHO05D006032 3.3e-10 69.3 62 43.5
Cre14.g612500 Chlamydomonas reinhardtii HOM05D005049 ORTHO05D006032 1.5e-07 60.5 142 29.6
PRCOL_00002137 Prasinoderma coloniale HOM05D005049 ORTHO05D006032 2.0e-07 60.1 141 29.1


User provided reference genes

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