Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 3.0e-87 325.1 157 100.0
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 3.0e-87 325.1 157 100.0
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 1.9e-86 322.4 157 99.4
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 2.9e-82 308.5 157 95.5
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 2.9e-82 308.5 157 95.5
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 2.8e-77 292.0 157 89.2
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 3.8e-74 281.6 157 84.7
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 1.9e-73 279.3 157 89.8
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 1.9e-73 279.3 157 89.8
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 1.5e-67 259.6 157 81.5
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 3.2e-65 251.9 157 77.7
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 6.7e-63 244.2 158 77.2
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 6.7e-63 244.2 157 76.4
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 1.1e-62 243.4 157 76.4
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 1.8e-44 183.0 162 59.9
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 4.1e-44 181.8 157 59.9
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 8.2e-37 157.5 157 50.3
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 2.4e-36 156.0 157 51.6
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 2.4e-36 156.0 160 50.6
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 9.1e-36 154.1 96 68.8
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.7e-34 149.8 159 50.9
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.2e-34 149.4 152 50.0
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 3.8e-34 148.7 119 58.0
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 6.5e-34 147.9 154 50.0
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 8.5e-34 147.5 93 67.7
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 8.5e-34 147.5 93 67.7
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 1.1e-33 147.1 93 67.7
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 1.1e-33 147.1 152 50.0
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 1.1e-33 147.1 152 50.0
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 1.9e-33 146.4 163 49.7
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 3.2e-33 145.6 100 63.0
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 3.2e-33 145.6 97 68.0
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 3.2e-33 145.6 171 47.4
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 4.2e-33 145.2 100 62.0
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 4.2e-33 145.2 157 47.8
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 5.5e-33 144.8 156 48.7
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 1.2e-32 143.7 102 60.8
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 2.1e-32 142.9 98 66.3
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 2.1e-32 142.9 160 46.2
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 4.7e-32 141.7 157 48.4
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 8.0e-32 141.0 116 57.8
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 8.0e-32 141.0 98 66.3
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 1.0e-31 140.6 97 67.0
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 1.0e-31 140.6 108 59.3
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 1.8e-31 139.8 101 61.4
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 1.8e-31 139.8 157 45.9
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 1.8e-31 139.8 157 45.9
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 3.0e-31 139.0 95 66.3
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 3.0e-31 139.0 97 67.0
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 5.2e-31 138.3 96 65.6
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 8.8e-31 137.5 102 63.7
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 1.2e-30 137.1 93 66.7
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 2.0e-30 136.3 97 63.9
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.6e-30 136.0 93 68.8
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.6e-30 136.0 118 56.8
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 2.6e-30 136.0 112 60.7
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 3.3e-30 135.6 126 52.4
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 4.4e-30 135.2 134 50.0
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 5.7e-30 134.8 101 62.4
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 5.7e-30 134.8 127 51.2
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 7.5e-30 134.4 96 63.5
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 7.5e-30 134.4 90 70.0
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 7.5e-30 134.4 87 67.8
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 7.5e-30 134.4 87 67.8
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 7.5e-30 134.4 95 62.1
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 7.5e-30 134.4 99 62.6
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 9.7e-30 134.0 159 47.2
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 9.7e-30 134.0 99 62.6
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 1.3e-29 133.7 98 59.2
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 1.3e-29 133.7 93 68.8
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 1.7e-29 133.3 95 61.1
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 2.2e-29 132.9 95 64.2
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 4.8e-29 131.7 100 63.0
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 4.8e-29 131.7 137 48.9
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 6.3e-29 131.3 157 45.2
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.1e-28 130.6 144 44.4
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 1.4e-28 130.2 102 61.8
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 1.8e-28 129.8 87 69.0
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 2.4e-28 129.4 94 63.8
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 3.1e-28 129.0 98 59.2
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 4.1e-28 128.6 96 60.4
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 2.0e-27 126.3 88 63.6
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 2.0e-27 126.3 89 66.3
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 2.0e-27 126.3 89 66.3
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 2.7e-27 125.9 80 71.2
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 2.7e-27 125.9 98 60.2
C04p49790 Brassica napus HOM05D007565 ORTHO05D009551 1.3e-26 123.6 61 95.1
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 1.3e-26 123.6 99 57.6
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 1.7e-26 123.2 92 62.0
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 2.2e-26 122.9 84 64.3
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 2.9e-26 122.5 96 61.5
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 8.5e-26 120.9 75 70.7
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 3.4e-22 109.0 101 51.5
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 2.2e-21 106.3 86 53.5
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 1.1e-20 104.0 89 58.4
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 2.0e-19 99.8 82 54.9
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 4.5e-19 98.6 102 48.0
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 8.6e-18 94.4 74 58.1
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 1.1e-17 94.0 76 56.6
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.5e-17 93.6 68 61.8
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 4.5e-11 72.0 47 63.8
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 6.6e-10 68.2 49 63.3


User provided reference genes

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