Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p49190 Brassica napus HOM05D000790 ORTHO05D000769 4.7e-23 110.2 49 100.0
BcaC02g08912 Brassica carinata HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
BcaC02g08913 Brassica carinata HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
BcaC02g08914 Brassica carinata HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
C04p49180 Brassica napus HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
C04p49240 Brassica napus HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
C04p49260 Brassica napus HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
C04p49270 Brassica napus HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
BolC4t26503H Brassica oleracea HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
BolC4t26506H Brassica oleracea HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
BolC4t26508H Brassica oleracea HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
BolC4t26509H Brassica oleracea HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
BraA04t17142Z Brassica rapa HOM05D000790 ORTHO05D000769 1.8e-22 108.2 48 100.0
BraA04t17143Z Brassica rapa HOM05D000790 ORTHO05D000769 3.0e-22 107.5 48 97.9
BraA04t17144Z Brassica rapa HOM05D000790 ORTHO05D000769 5.2e-22 106.7 48 97.9
C04p49210 Brassica napus HOM05D000790 ORTHO05D000769 2.0e-21 104.8 48 97.9
BolC4t26505H Brassica oleracea HOM05D000790 ORTHO05D000769 2.0e-21 104.8 48 97.9
BcaC02g08911 Brassica carinata HOM05D000790 ORTHO05D000769 1.4e-19 98.6 48 93.8
C04p49280 Brassica napus HOM05D000790 ORTHO05D000769 1.4e-19 98.6 48 93.8
BolC4t26512H Brassica oleracea HOM05D000790 ORTHO05D000769 1.4e-19 98.6 48 93.8
AT2G37800 Arabidopsis thaliana HOM05D000790 ORTHO05D000769 8.3e-12 72.8 36 80.6
AT2G37805 Arabidopsis thaliana HOM05D000790 ORTHO05D000769 8.3e-12 72.8 38 76.3
A03p20880 Brassica napus HOM05D000790 ORTHO05D000769 1.1e-11 72.4 48 66.7
BraA03t11328Z Brassica rapa HOM05D000790 ORTHO05D000769 1.1e-11 72.4 48 66.7
BcaB01g03753 Brassica carinata HOM05D000790 ORTHO05D000769 1.4e-11 72.0 43 67.4
AL4G34710 Arabidopsis lyrata HOM05D000790 ORTHO05D000769 1.9e-11 71.6 42 64.3
BcaB01g03751 Brassica carinata HOM05D000790 ORTHO05D000769 1.9e-11 71.6 41 68.3
SpUn0309_0030 Schrenkiella parvula HOM05D000790 ORTHO05D000769 3.2e-11 70.9 39 71.8
A04p28950 Brassica napus HOM05D000790 ORTHO05D000769 4.1e-11 70.5 44 72.7
AT2G37780 Arabidopsis thaliana HOM05D000790 ORTHO05D000769 5.4e-11 70.1 42 64.3
AL4G34750 Arabidopsis lyrata HOM05D000790 ORTHO05D000769 7.0e-11 69.7 38 73.7
AT2G37820 Arabidopsis thaliana HOM05D000790 ORTHO05D000769 7.0e-11 69.7 35 74.3
Thhalv10017138m.g Eutrema salsugineum HOM05D000790 ORTHO05D000769 7.0e-11 69.7 41 63.4
Aa31sc218G70 Aethionema arabicum HOM05D000790 ORTHO05D000769 9.2e-11 69.3 43 60.5
BcaB02g09242 Brassica carinata HOM05D000790 ORTHO05D000769 1.2e-10 68.9 37 70.3
BcaC02g11912 Brassica carinata HOM05D000790 ORTHO05D000769 1.2e-10 68.9 37 70.3
BcaC02g11913 Brassica carinata HOM05D000790 ORTHO05D000769 1.2e-10 68.9 37 70.3
A05p08120 Brassica napus HOM05D000790 ORTHO05D000769 1.2e-10 68.9 37 70.3
C04p10050 Brassica napus HOM05D000790 ORTHO05D000769 1.2e-10 68.9 37 70.3
C04p66210 Brassica napus HOM05D000790 ORTHO05D000769 1.2e-10 68.9 44 70.5
BolC4t22610H Brassica oleracea HOM05D000790 ORTHO05D000769 1.2e-10 68.9 37 70.3
BolC4t28124H Brassica oleracea HOM05D000790 ORTHO05D000769 1.2e-10 68.9 44 70.5
BraA05t19780Z Brassica rapa HOM05D000790 ORTHO05D000769 1.2e-10 68.9 37 70.3
Carub.0004s1974 Capsella rubella HOM05D000790 ORTHO05D000769 1.2e-10 68.9 38 65.8
BcaB06g29027 Brassica carinata HOM05D000790 ORTHO05D000769 1.6e-10 68.6 40 67.5
AT2G37810 Arabidopsis thaliana HOM05D000790 ORTHO05D000769 2.0e-10 68.2 39 69.2
Carub.0004s1972 Capsella rubella HOM05D000790 ORTHO05D000769 2.0e-10 68.2 35 74.3
Thhalv10017859m.g Eutrema salsugineum HOM05D000790 ORTHO05D000769 2.7e-10 67.8 37 70.3
SpUn0309_0020 Schrenkiella parvula HOM05D000790 ORTHO05D000769 4.6e-10 67.0 37 70.3
BcaB01g03750 Brassica carinata HOM05D000790 ORTHO05D000769 6.0e-10 66.6 34 76.5
CARHR131750 Cardamine hirsuta HOM05D000790 ORTHO05D000769 6.0e-10 66.6 36 69.4
BcaB06g29030 Brassica carinata HOM05D000790 ORTHO05D000769 3.9e-09 63.9 37 64.9
Thhalv10017974m.g Eutrema salsugineum HOM05D000790 ORTHO05D000769 3.9e-09 63.9 41 58.5
BcaC01g05590 Brassica carinata HOM05D000790 ORTHO05D000769 5.0e-09 63.5 39 61.5
C03p24530 Brassica napus HOM05D000790 ORTHO05D000769 5.0e-09 63.5 39 61.5
BolC3t14851H Brassica oleracea HOM05D000790 ORTHO05D000769 5.0e-09 63.5 39 61.5
CARHR131730 Cardamine hirsuta HOM05D000790 ORTHO05D000769 5.0e-09 63.5 37 64.9
BcaB02g09244 Brassica carinata HOM05D000790 ORTHO05D000769 6.6e-09 63.2 41 58.5
AL4G34760 Arabidopsis lyrata HOM05D000790 ORTHO05D000769 8.6e-09 62.8 39 64.1
THA.LOC104807012 Tarenaya hassleriana HOM05D000790 ORTHO05D000769 1.1e-08 62.4 42 54.8
BcaC01g05591 Brassica carinata HOM05D000790 ORTHO05D000769 1.5e-08 62.0 35 68.6
BcaC02g11907 Brassica carinata HOM05D000790 ORTHO05D000769 1.5e-08 62.0 41 56.1
A03p20860 Brassica napus HOM05D000790 ORTHO05D000769 1.5e-08 62.0 35 68.6
A05p08160 Brassica napus HOM05D000790 ORTHO05D000769 1.5e-08 62.0 41 56.1
C03p24520 Brassica napus HOM05D000790 ORTHO05D000769 1.5e-08 62.0 35 68.6
C04p10090 Brassica napus HOM05D000790 ORTHO05D000769 1.5e-08 62.0 41 56.1
BolC4t22613H Brassica oleracea HOM05D000790 ORTHO05D000769 1.5e-08 62.0 41 56.1
BraA03t11327Z Brassica rapa HOM05D000790 ORTHO05D000769 1.5e-08 62.0 35 68.6
BraA05t19783Z Brassica rapa HOM05D000790 ORTHO05D000769 1.5e-08 62.0 41 56.1
BolC3t14850H Brassica oleracea HOM05D000790 ORTHO05D000769 4.3e-08 60.5 35 68.6
Thhalv10017531m.g Eutrema salsugineum HOM05D000790 ORTHO05D000769 9.5e-08 59.3 37 62.2
Duzib128G1286 Durio zibethinus HOM05D000790 ORTHO05D000769 1.2e-07 58.9 46 58.7
Aa31LG2G10380 Aethionema arabicum HOM05D000790 ORTHO05D000769 1.6e-07 58.5 37 59.5
BcaB01g03754 Brassica carinata HOM05D000790 ORTHO05D000769 2.1e-07 58.2 36 66.7
Thhalv10017725m.g Eutrema salsugineum HOM05D000790 ORTHO05D000769 4.7e-07 57.0 37 59.5
Sp4g20150 Schrenkiella parvula HOM05D000790 ORTHO05D000769 8.1e-07 56.2 33 63.6
SalBow5G2161 Salvia bowleyana HOM05D000790 ORTHO05D000769 1.4e-06 55.5 48 50.0
SalBow5G3773 Salvia bowleyana HOM05D000790 ORTHO05D000769 1.4e-06 55.5 48 50.0
Gohir.D04G124601 Gossypium hirsutum HOM05D000790 ORTHO05D000769 3.1e-06 54.3 37 54.1
Thecc.05G032000 Theobroma cacao HOM05D000790 ORTHO05D000769 3.1e-06 54.3 46 50.0
Thecc.05G032100 Theobroma cacao HOM05D000790 ORTHO05D000769 4.0e-06 53.9 46 50.0


User provided reference genes

Program Settings