Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 1.3e-177 626.3 324 100.0
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 3.8e-177 624.8 324 99.7
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 2.1e-175 619.0 324 98.5
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 2.1e-175 619.0 324 98.5
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 5.8e-170 600.9 325 96.9
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 7.9e-159 563.9 329 89.4
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 3.0e-158 562.0 328 88.4
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 9.6e-157 557.0 328 89.0
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 4.8e-156 554.7 331 88.5
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 9.0e-155 550.4 326 87.1
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 9.9e-154 547.0 328 86.6
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 7.6e-146 520.8 328 82.0
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 1.1e-131 473.8 329 76.3
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 6.7e-126 454.5 328 72.0
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 3.6e-119 432.2 330 69.1
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 1.0e-118 430.6 334 68.9
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 1.1e-117 427.2 333 68.8
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 1.5e-117 426.8 327 67.3
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 4.4e-117 425.2 336 68.2
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 4.4e-117 425.2 336 68.2
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 5.7e-117 424.9 335 67.2
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 1.3e-116 423.7 310 71.3
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 1.7e-116 423.3 335 66.9
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 1.7e-116 423.3 305 71.5
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 2.2e-116 422.9 335 67.5
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 4.8e-116 421.8 275 76.4
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 6.3e-116 421.4 336 67.6
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.1e-115 420.6 301 72.1
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 7.0e-115 417.9 323 69.3
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 9.1e-115 417.5 336 65.8
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.2e-114 417.2 286 73.4
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 1.6e-114 416.8 340 66.5
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.6e-114 416.0 307 69.4
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 2.6e-114 416.0 338 65.7
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 2.6e-114 416.0 316 67.4
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 3.5e-114 415.6 338 66.9
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 3.5e-114 415.6 339 65.2
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 4.5e-114 415.2 336 67.6
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 4.5e-114 415.2 290 72.8
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 5.9e-114 414.8 270 76.7
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 5.9e-114 414.8 270 76.7
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 7.7e-114 414.5 310 67.1
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 1.3e-113 413.7 299 71.6
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 1.7e-113 413.3 337 64.4
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 2.2e-113 412.9 299 71.9
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.9e-113 412.5 337 64.4
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 3.8e-113 412.1 298 70.1
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 5.0e-113 411.8 316 68.4
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.1e-112 410.6 313 68.1
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.1e-112 410.6 304 70.7
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 2.5e-112 409.5 345 65.5
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 2.5e-112 409.5 299 71.2
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 2.5e-112 409.5 277 73.6
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 4.2e-112 408.7 329 66.3
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 9.4e-112 407.5 299 69.6
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.2e-111 407.1 303 70.6
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 1.2e-111 407.1 325 66.8
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 1.2e-111 407.1 323 66.6
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 1.2e-111 407.1 310 66.8
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 2.1e-111 406.4 340 63.5
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 2.7e-111 406.0 250 78.8
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 3.6e-111 405.6 315 67.9
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 3.6e-111 405.6 291 69.1
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 6.1e-111 404.8 321 66.4
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 1.0e-110 404.1 331 64.4
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.0e-110 404.1 304 70.1
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.4e-110 403.7 336 65.2
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 1.8e-110 403.3 337 64.1
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 2.3e-110 402.9 339 64.3
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 4.0e-110 402.1 280 72.1
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 6.8e-110 401.4 289 70.9
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 6.8e-110 401.4 336 64.9
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 1.5e-109 400.2 261 74.7
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.5e-109 400.2 344 62.5
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 2.0e-109 399.8 329 63.2
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 2.6e-109 399.4 320 67.2
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 9.7e-109 397.5 252 77.4
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 9.7e-109 397.5 273 71.8
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 1.3e-108 397.1 321 63.9
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 1.3e-108 397.1 298 68.8
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 2.8e-108 396.0 321 63.6
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 4.8e-108 395.2 252 77.4
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 6.3e-108 394.8 340 62.4
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.4e-107 393.7 254 74.8
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 3.1e-107 392.5 252 74.2
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 9.1e-107 391.0 302 68.2
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.6e-106 390.2 317 66.6
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 3.5e-106 389.0 328 64.3
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 2.2e-105 386.3 365 58.4
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 3.2e-104 382.5 289 68.5
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 4.2e-104 382.1 302 65.2
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 7.2e-104 381.3 250 74.0
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 7.2e-104 381.3 311 63.3
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 6.1e-103 378.3 307 63.5
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 1.0e-102 377.5 270 70.0
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 1.8e-102 376.7 321 61.4
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 8.8e-102 374.4 296 65.2
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 8.8e-102 374.4 306 65.0
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 5.7e-101 371.7 256 71.5
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 1.7e-100 370.2 276 70.7
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 3.1e-99 365.9 367 55.0
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 2.7e-98 362.8 248 72.2
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 4.7e-95 352.1 273 65.2
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 5.2e-94 348.6 300 64.0
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 2.2e-92 343.2 297 61.3
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 6.3e-92 341.7 290 62.8
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 1.3e-89 334.0 295 59.7
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 5.0e-89 332.0 338 55.9
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.3e-86 323.2 351 54.1
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 7.8e-82 308.1 300 57.0
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 8.3e-76 288.1 233 64.4
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 1.9e-75 287.0 275 58.5
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 1.6e-71 273.9 310 52.6
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 7.6e-61 238.4 238 51.7
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 4.2e-59 232.6 320 42.2
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 5.6e-56 222.2 217 55.8
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 7.3e-56 221.9 236 50.4
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.6e-56 221.5 176 67.6
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 2.8e-55 219.9 208 61.5
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.8e-54 217.2 207 59.9
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 4.2e-51 206.1 271 42.1
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 1.6e-50 204.1 150 66.0
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 1.3e-49 201.1 204 56.4
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 6.6e-49 198.7 247 43.3
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.9e-48 197.2 127 76.4
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.9e-48 197.2 127 76.4
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.8e-47 193.4 109 84.4
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 5.3e-46 189.1 125 76.0
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 8.4e-44 181.8 170 57.1
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 1.8e-41 174.1 236 40.3
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 2.8e-39 166.8 90 92.2
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 2.8e-39 166.8 90 92.2
BcaC04g20647 Brassica carinata HOM05D004896 ORTHO05D006447 3.7e-39 166.4 89 93.3
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 8.1e-39 165.2 248 39.1
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 3.7e-31 139.8 91 72.5
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 1.3e-28 131.3 100 65.0
BraA05t20477Z Brassica rapa HOM05D004896 ORTHO05D024046 2.9e-28 130.2 83 75.9
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 3.8e-28 129.8 105 65.7
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 1.4e-27 127.9 106 66.0
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 1.8e-25 120.9 215 34.4
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 3.0e-25 120.2 66 86.4
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 3.3e-24 116.7 65 84.6
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 7.4e-24 115.5 65 84.6
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 7.4e-24 115.5 68 80.9
BcaB01g05885 Brassica carinata HOM05D004896 ORTHO05D024046 3.2e-19 100.1 80 63.8
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 3.2e-19 100.1 52 92.3
A05p15620 Brassica napus HOM05D004896 ORTHO05D024046 6.1e-18 95.9 60 78.3
Atru.chr1.2050 Acer truncatum HOM05D004896 ORTHO05D006447 1.1e-16 91.7 81 63.0
BcaC01g04583 Brassica carinata HOM05D004896 ORTHO05D006447 4.3e-16 89.7 47 91.5
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 1.8e-14 84.3 154 35.7
TAR628G1566 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.6e-10 71.2 51 64.7
Actinidia35788 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.0e-09 68.6 45 77.8


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