Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p46560 Brassica napus HOM05D006887 ORTHO05D004325 2.2e-66 255.4 117 100.0
BolC4t26242H Brassica oleracea HOM05D006887 ORTHO05D004325 2.2e-66 255.4 117 100.0
BraA04t16961Z Brassica rapa HOM05D006887 ORTHO05D004325 6.5e-47 190.7 121 77.7
BolC4t26262H Brassica oleracea HOM05D006887 ORTHO05D004325 3.2e-46 188.3 117 80.3
A04p12860 Brassica napus HOM05D006887 ORTHO05D004325 5.2e-44 181.0 121 74.4
A04p13000 Brassica napus HOM05D006887 ORTHO05D004325 6.3e-42 174.1 115 74.8
BraA04t16949Z Brassica rapa HOM05D006887 ORTHO05D004325 3.5e-40 168.3 115 73.0
BolC4t26255H Brassica oleracea HOM05D006887 ORTHO05D004325 1.5e-38 162.9 130 70.0
A04p12980 Brassica napus HOM05D006887 ORTHO05D004325 9.5e-38 160.2 128 68.0
BraA04t16959Z Brassica rapa HOM05D006887 ORTHO05D004325 6.3e-34 147.5 117 68.4
BcaB06g27414 Brassica carinata HOM05D006887 ORTHO05D004325 2.5e-30 135.6 132 64.4
BcaB06g27394 Brassica carinata HOM05D006887 ORTHO05D004325 1.4e-28 129.8 130 63.8
BcaB08g34810 Brassica carinata HOM05D006887 ORTHO05D004325 1.3e-26 123.2 130 62.3
BcaB06g27671 Brassica carinata HOM05D006887 ORTHO05D004325 1.1e-25 120.2 126 60.3
BcaB06g27670 Brassica carinata HOM05D006887 ORTHO05D004325 3.2e-25 118.6 128 59.4
C04p46750 Brassica napus HOM05D006887 ORTHO05D004325 2.5e-22 109.0 182 41.8
BcaB06g27436 Brassica carinata HOM05D006887 ORTHO05D004325 9.8e-19 97.1 138 55.8
C04p46390 Brassica napus HOM05D006887 ORTHO05D004325 1.4e-17 93.2 128 52.3
BolC4t26260H Brassica oleracea HOM05D006887 ORTHO05D004325 3.5e-16 88.6 147 46.3
C04p46670 Brassica napus HOM05D006887 ORTHO05D004325 7.8e-16 87.4 86 60.5
BraA04t16923Z Brassica rapa HOM05D006887 ORTHO05D004325 8.9e-12 73.9 70 62.9
Carub.0007s3559 Capsella rubella HOM05D006887 ORTHO05D004325 8.9e-12 73.9 122 46.7
AL7G49930 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 4.6e-08 61.6 85 51.8
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 4.6e-08 61.6 123 43.1
AT5G65330 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 6.6e-07 57.8 133 45.1
BcaB06g27442 Brassica carinata HOM05D006887 ORTHO05D004325 2.5e-06 55.8 89 50.6
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 3.3e-06 55.5 89 43.8
AT4G11250 Arabidopsis thaliana HOM05D006887 ORTHO05D004325 7.3e-06 54.3 124 44.4


User provided reference genes

Program Settings