Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p46080 Brassica napus HOM05D004915 ORTHO05D006048 7.1e-150 533.9 265 100.0
BolC4t26193H Brassica oleracea HOM05D004915 ORTHO05D006048 1.8e-148 529.3 265 98.9
BraA04t16903Z Brassica rapa HOM05D004915 ORTHO05D006048 2.2e-143 512.3 265 95.1
A04p12400 Brassica napus HOM05D004915 ORTHO05D006048 3.8e-143 511.5 265 95.1
Sp7g02320 Schrenkiella parvula HOM05D004915 ORTHO05D006048 3.7e-138 495.0 262 91.6
Thhalv10027886m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.6e-133 479.6 263 87.1
Carub.0007s3626 Capsella rubella HOM05D004915 ORTHO05D006048 2.4e-129 465.7 262 85.1
CARHR262560 Cardamine hirsuta HOM05D004915 ORTHO05D006048 2.8e-122 442.2 260 82.3
Aa31LG9G16420 Aethionema arabicum HOM05D004915 ORTHO05D006048 2.6e-115 419.1 261 76.6
BcaB06g27359 Brassica carinata HOM05D004915 ORTHO05D006048 6.3e-114 414.5 263 82.5
BcaC06g33662 Brassica carinata HOM05D004915 ORTHO05D006048 4.2e-110 401.7 258 72.5
C07p37910 Brassica napus HOM05D004915 ORTHO05D006048 4.2e-110 401.7 258 72.5
Sp2g17640 Schrenkiella parvula HOM05D004915 ORTHO05D006048 5.5e-110 401.4 261 73.2
AL5G18870 Arabidopsis lyrata HOM05D004915 ORTHO05D006048 7.2e-110 401.0 256 73.0
A06p40200 Brassica napus HOM05D004915 ORTHO05D006048 9.4e-110 400.6 255 72.5
Aa31LG2G4180 Aethionema arabicum HOM05D004915 ORTHO05D006048 2.7e-109 399.1 253 73.9
Carub.0005s0760 Capsella rubella HOM05D004915 ORTHO05D006048 4.7e-109 398.3 253 74.3
BraA06t26934Z Brassica rapa HOM05D004915 ORTHO05D006048 6.1e-109 397.9 255 72.5
Thhalv10005292m.g Eutrema salsugineum HOM05D004915 ORTHO05D006048 1.8e-108 396.4 255 73.3
BolC7t44312H Brassica oleracea HOM05D004915 ORTHO05D006048 6.7e-108 394.4 258 71.3
CARHR152100 Cardamine hirsuta HOM05D004915 ORTHO05D006048 9.7e-107 390.6 250 72.4
Phvul.008G037200 Phaseolus vulgaris HOM05D004915 ORTHO05D006048 9.8e-99 364.0 248 66.5
VMungo1383G0755 Vigna mungo HOM05D004915 ORTHO05D006048 3.7e-98 362.1 248 66.1
Sabra17G0075000 Salix brachista HOM05D004915 ORTHO05D006048 3.1e-97 359.0 262 65.6
Ciclev10012474m.g Citrus clementina HOM05D004915 ORTHO05D006048 4.1e-97 358.6 249 65.9
Aqoxy3G03429 Aquilegia oxysepala HOM05D004915 ORTHO05D006048 9.1e-97 357.5 253 64.0
Potri.017G085100 Populus trichocarpa HOM05D004915 ORTHO05D006048 2.0e-96 356.3 262 65.3
Glyma.09G236600 Glycine max HOM05D004915 ORTHO05D006048 4.5e-96 355.1 248 66.1
Lj1g0024391 Lotus japonicus HOM05D004915 ORTHO05D006048 5.9e-96 354.8 247 64.8
TPR.G33578 Trifolium pratense HOM05D004915 ORTHO05D006048 5.9e-96 354.8 243 67.1
Dinv37673 Davidia involucrata HOM05D004915 ORTHO05D006048 7.7e-96 354.4 252 66.3
Actinidia38781 Actinidia chinensis HOM05D004915 ORTHO05D006048 1.0e-95 354.0 257 64.6
Cpa.g.sc179.53 Carica papaya HOM05D004915 ORTHO05D006048 1.3e-95 353.6 252 64.7
Atru.chr8.192 Acer truncatum HOM05D004915 ORTHO05D006048 1.7e-95 353.2 258 62.0
Rhsim08G0070400 Rhododendron simsii HOM05D004915 ORTHO05D006048 6.6e-95 351.3 252 64.7
Ca_02901_v3 Cicer arietinum L. HOM05D004915 ORTHO05D006048 1.5e-94 350.1 247 64.4
TWI34G1631 Tripterygium wilfordii HOM05D004915 ORTHO05D006048 4.2e-94 348.6 248 65.3
arahy.Tifrunner.gnm1.ann1.BYQL86 Arachis hypogaea HOM05D004915 ORTHO05D006048 5.5e-94 348.2 240 65.8
PSO478G3309 Papaver somniferum HOM05D004915 ORTHO05D006048 9.5e-94 347.4 252 63.5
QL10p017218 Quercus lobata HOM05D004915 ORTHO05D006048 9.5e-94 347.4 258 62.4
TPR.G39201 Trifolium pratense HOM05D004915 ORTHO05D006048 9.5e-94 347.4 243 65.4
ECA246G2050 Erigeron canadensis HOM05D004915 ORTHO05D006048 1.6e-93 346.7 253 64.0
RcHm_v2.0_Chr7g0181591 Rosa chinensis HOM05D004915 ORTHO05D006048 2.8e-93 345.9 246 64.2
Actinidia38763 Actinidia chinensis HOM05D004915 ORTHO05D006048 4.7e-93 345.1 267 61.8
HanXRQChr08g0236601 Helianthus annuus HOM05D004915 ORTHO05D006048 6.1e-93 344.7 247 65.2
FAN04G1144 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.4e-92 343.6 260 61.2
FAN08G1694 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.3e-92 342.8 260 60.8
Sopen06g023800 Solanum pennellii HOM05D004915 ORTHO05D006048 2.3e-92 342.8 245 65.7
TAR622G0868 Trochodendron aralioides HOM05D004915 ORTHO05D006048 2.3e-92 342.8 246 64.2
Manes.01G092400 Manihot esculenta HOM05D004915 ORTHO05D006048 3.0e-92 342.4 254 61.4
HanXRQChr09g0247201 Helianthus annuus HOM05D004915 ORTHO05D006048 6.8e-92 341.3 247 64.0
MD06G1194800 Malus domestica HOM05D004915 ORTHO05D006048 6.8e-92 341.3 249 63.5
Medtr7g011040 Medicago truncatula HOM05D004915 ORTHO05D006048 6.8e-92 341.3 243 63.0
CSS0019190 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.5e-91 340.1 251 62.9
Lj4A111T68 Lonicera japonica HOM05D004915 ORTHO05D006048 1.5e-91 340.1 266 62.4
Prupe.5G195000 Prunus persica HOM05D004915 ORTHO05D006048 1.5e-91 340.1 263 60.8
FAN18G3490 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.0e-91 339.7 260 60.0
FAN13G2234 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.6e-91 339.3 260 60.4
MD14G1201800 Malus domestica HOM05D004915 ORTHO05D006048 3.4e-91 339.0 249 63.5
Psat3g200280 Pisum sativum HOM05D004915 ORTHO05D006048 3.4e-91 339.0 242 65.3
Medtr1g111380 Medicago truncatula HOM05D004915 ORTHO05D006048 4.4e-91 338.6 243 61.7
THA.LOC104825807 Tarenaya hassleriana HOM05D004915 ORTHO05D006048 4.4e-91 338.6 284 60.2
Lsat_1_v5_gn_9_27040 Lactuca sativa HOM05D004915 ORTHO05D006048 5.7e-91 338.2 252 62.7
PGSC0003DMG400026111 Solanum tuberosum HOM05D004915 ORTHO05D006048 7.5e-91 337.8 251 61.8
Solyc06g065310.3 Solanum lycopersicum HOM05D004915 ORTHO05D006048 9.8e-91 337.4 243 63.8
FvH4_5g14790 Fragaria vesca HOM05D004915 ORTHO05D006048 1.3e-90 337.0 260 60.0
Peaxi162Scf00241g00416 Petunia axillaris HOM05D004915 ORTHO05D006048 2.8e-90 335.9 248 63.3
CAN.G199.5 Capsicum annuum HOM05D004915 ORTHO05D006048 3.7e-90 335.5 240 63.8
FvH4_7g07490 Fragaria vesca HOM05D004915 ORTHO05D006048 3.7e-90 335.5 250 62.8
TAR374G0666 Trochodendron aralioides HOM05D004915 ORTHO05D006048 6.3e-90 334.7 256 62.1
Eucgr.B00520 Eucalyptus grandis HOM05D004915 ORTHO05D006048 1.1e-89 334.0 259 58.7
FAN10G0297 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.1e-89 334.0 250 62.0
Thecc.03G090400 Theobroma cacao HOM05D004915 ORTHO05D006048 1.1e-89 334.0 250 61.6
MBI05_g33757_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.8e-89 333.2 246 62.6
Lalb_Chr23g0265041 Lupinus albus HOM05D004915 ORTHO05D006048 2.4e-89 332.8 248 61.3
Cfa018930 Carpinus fangiana HOM05D004915 ORTHO05D006048 4.1e-89 332.0 261 59.8
Duzib205G1074 Durio zibethinus HOM05D004915 ORTHO05D006048 5.4e-89 331.6 246 61.4
Cc04_g16470 Coffea canephora HOM05D004915 ORTHO05D006048 7.0e-89 331.3 261 60.5
Nitab4.5_0000121g0120 Nicotiana tabacum HOM05D004915 ORTHO05D006048 9.2e-89 330.9 243 63.4
FAN03G1016 Fragaria x ananassa HOM05D004915 ORTHO05D006048 1.2e-88 330.5 250 61.6
Hma1.2p1_0060F.1_g033670 Hydrangea macrophylla HOM05D004915 ORTHO05D006048 1.6e-88 330.1 255 58.8
SGA_v2.0_scaffold17G08101 Striga asiatica HOM05D004915 ORTHO05D006048 2.0e-88 329.7 261 59.0
MSTRG.15680 Avicennia marina HOM05D004915 ORTHO05D006048 2.7e-88 329.3 257 60.3
CiPaw.11G045800 Carya illinoinensis HOM05D004915 ORTHO05D006048 3.5e-88 328.9 255 60.8
COL.COLO4_22946 Corchorus olitorius HOM05D004915 ORTHO05D006048 3.5e-88 328.9 226 64.2
GSVIVG01007990001 Vitis vinifera HOM05D004915 ORTHO05D006048 1.3e-87 327.0 263 55.9
Hund02640 Selenicereus undatus HOM05D004915 ORTHO05D006048 2.3e-87 326.2 247 60.3
Lj5C110T19 Lonicera japonica HOM05D004915 ORTHO05D006048 6.6e-87 324.7 247 60.3
MBI05_g35466_MAGBIO Magnolia biondii HOM05D004915 ORTHO05D006048 1.5e-86 323.6 260 59.2
Oeu058311.1 Olea europaea HOM05D004915 ORTHO05D006048 9.5e-86 320.9 247 58.7
AUR62021031 Chenopodium quinoa HOM05D004915 ORTHO05D006048 2.1e-85 319.7 252 57.1
Migut.L00264 Erythranthe guttata HOM05D004915 ORTHO05D006048 2.8e-85 319.3 264 57.2
Oeu037787.1 Olea europaea HOM05D004915 ORTHO05D006048 3.6e-85 318.9 259 58.3
Haze_07314 Corylus avellana HOM05D004915 ORTHO05D006048 4.7e-85 318.5 296 53.0
Nn4g23203 Nelumbo nucifera HOM05D004915 ORTHO05D006048 4.7e-85 318.5 235 62.1
Peaxi162Scf00106g00016 Petunia axillaris HOM05D004915 ORTHO05D006048 2.3e-84 316.2 279 55.6
CsaV3_1G005570 Cucumis sativus L. HOM05D004915 ORTHO05D006048 1.5e-83 313.5 262 57.6
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.5e-83 313.5 242 56.6
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 1.5e-83 313.5 242 56.6
EL10Ac3g07299 Beta vulgaris HOM05D004915 ORTHO05D006048 2.6e-83 312.8 299 51.2
CANSAT56G1541 Cannabis sativa HOM05D004915 ORTHO05D006048 7.5e-83 311.2 239 59.0
MELO3C001989.2 Cucumis melo HOM05D004915 ORTHO05D006048 7.5e-83 311.2 262 57.6
AUR62018412 Chenopodium quinoa HOM05D004915 ORTHO05D006048 1.3e-82 310.5 245 57.6
AT3G29010 Arabidopsis thaliana HOM05D004915 ORTHO05D006048 1.7e-82 310.1 183 78.1
ClCG04G012190 Citrullus lanatus HOM05D004915 ORTHO05D006048 2.2e-82 309.7 246 58.9
PGR083G1377 Punica granatum HOM05D004915 ORTHO05D006048 6.4e-82 308.1 228 61.8
CSS0012692 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.9e-81 306.6 251 59.4
SEGI_18610 Sequoiadendron giganteum HOM05D004915 ORTHO05D006048 3.5e-80 302.4 215 62.8
Os08g0435800 Oryza sativa ssp. japonica HOM05D004915 ORTHO05D006048 3.0e-79 299.3 247 55.1
Zm00001eb211140 Zea mays HOM05D004915 ORTHO05D006048 1.1e-78 297.4 259 54.1
DCAR_015957 Daucus carota HOM05D004915 ORTHO05D006048 9.5e-78 294.3 243 57.6
Mapoly0106s0015 Marchantia polymorpha HOM05D004915 ORTHO05D006048 9.5e-78 294.3 246 55.3
Pp3c2_33530 Physcomitrium patens HOM05D004915 ORTHO05D006048 3.2e-73 279.3 248 52.8
PGR031G1409 Punica granatum HOM05D004915 ORTHO05D006048 1.0e-71 274.2 213 56.8
Sc04g0002730 Simmondsia chinensis HOM05D004915 ORTHO05D006048 2.3e-71 273.1 169 70.4
Sed0011950 Sechium edule HOM05D004915 ORTHO05D006048 1.8e-68 263.5 182 65.4
Gorai.001G074400 Gossypium raimondii HOM05D004915 ORTHO05D006048 3.1e-68 262.7 197 60.4
Gohir.D07G070500 Gossypium hirsutum HOM05D004915 ORTHO05D006048 8.9e-68 261.2 197 60.4
SMO119G0486 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 2.0e-67 260.0 228 51.3
AagrBONN_evm.TU.Sc2ySwM_344.3958 Anthoceros agrestis HOM05D004915 ORTHO05D006048 4.4e-67 258.8 228 50.9
CSS0012742 Camellia sinensis var. sinensis HOM05D004915 ORTHO05D006048 1.2e-64 250.8 253 49.8
Actinidia26226 Actinidia chinensis HOM05D004915 ORTHO05D006048 2.3e-63 246.5 243 51.9
ATR0626G227 Amborella trichopoda HOM05D004915 ORTHO05D006048 4.3e-62 242.3 202 55.9
AagrBONN_evm.TU.Sc2ySwM_362.689 Anthoceros agrestis HOM05D004915 ORTHO05D006048 4.6e-56 222.2 179 54.7
MCO14G534 Micromonas commoda HOM05D004915 ORTHO05D006048 2.3e-55 219.9 231 47.2
AagrBONN_evm.TU.Sc2ySwM_362.690 Anthoceros agrestis HOM05D004915 ORTHO05D006048 2.4e-52 209.9 170 54.7
QL06p014871 Quercus lobata HOM05D004915 ORTHO05D006048 5.3e-52 208.8 129 68.2
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 2.0e-51 206.8 242 42.6
Cre01.g053750 Chlamydomonas reinhardtii HOM05D004915 ORTHO05D006048 5.8e-51 205.3 192 50.5
HanXRQChr14g0437411 Helianthus annuus HOM05D004915 ORTHO05D006048 8.4e-50 201.4 132 68.2
unitig_60.g25520 Utricularia gibba HOM05D004915 ORTHO05D006048 3.9e-47 192.6 254 42.5
SMO164G0178 Selaginella moellendorffii HOM05D004915 ORTHO05D006048 1.1e-46 191.0 237 41.8
HanXRQChr13g0408591 Helianthus annuus HOM05D004915 ORTHO05D006048 3.3e-46 189.5 126 66.7
CBR_g58409 Chara braunii HOM05D004915 ORTHO05D006048 1.3e-42 177.6 133 57.9
vmacro05688 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.3e-42 177.6 144 56.9
Gohir.A07G066000 Gossypium hirsutum HOM05D004915 ORTHO05D006048 1.4e-41 174.1 136 58.8
PRCOL_00000090 Prasinoderma coloniale HOM05D004915 ORTHO05D006048 4.2e-41 172.6 250 38.4
vmacro18186 Vaccinium macrocarpon HOM05D004915 ORTHO05D006048 1.6e-40 170.6 214 44.9
Nitab4.5_0005170g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 4.3e-38 162.5 116 67.2
Nitab4.5_0004528g0010 Nicotiana tabacum HOM05D004915 ORTHO05D006048 1.1e-36 157.9 287 38.0
DCAR_026059 Daucus carota HOM05D004915 ORTHO05D006048 3.7e-29 132.9 113 54.0
FAN06G0706 Fragaria x ananassa HOM05D004915 ORTHO05D006048 2.3e-23 113.6 102 52.9
Ah.04g150570 Amaranthus hybridus HOM05D004915 ORTHO05D006048 6.7e-23 112.1 79 59.5
QL06p014899 Quercus lobata HOM05D004915 ORTHO05D006048 1.2e-19 101.3 65 61.5
Nitab4.5_0005170g0060 Nicotiana tabacum HOM05D004915 ORTHO05D006048 5.9e-19 99.0 99 47.5
ATR0642G001 Amborella trichopoda HOM05D004915 ORTHO05D006048 1.0e-15 88.2 55 72.7
Pp3s30_306 Physcomitrium patens HOM05D004915 ORTHO05D043763 2.0e-06 57.4 186 25.3


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