Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p45080 Brassica napus HOM05D028159 ORTHO05D028005 9.5e-153 543.5 279 100.0
BcaC07g39338 Brassica carinata HOM05D000003 ORTHO05D000007 9.6e-113 410.6 269 83.6
BolC8t49986H Brassica oleracea HOM05D028159 ORTHO05D028005 4.1e-71 272.3 174 87.9
C05p06310 Brassica napus HOM05D028159 ORTHO05D028005 3.2e-68 262.7 150 97.3
BcaC08g43142 Brassica carinata HOM05D000003 ORTHO05D000283 3.6e-67 259.2 279 53.8
BcaC06g34146 Brassica carinata HOM05D000003 ORTHO05D000283 2.0e-65 253.4 271 53.9
BraA09t40338Z Brassica rapa HOM05D000003 ORTHO05D000007 1.8e-63 246.9 269 54.6
BcaB05g24536 Brassica carinata HOM05D000003 ORTHO05D000283 3.1e-63 246.1 263 55.5
BcaC02g12237 Brassica carinata HOM05D000003 ORTHO05D000007 8.5e-61 238.0 268 54.9
BcaB02g07776 Brassica carinata HOM05D000003 ORTHO05D000007 2.8e-56 223.0 256 51.6
BcaB06g25353 Brassica carinata HOM05D000003 ORTHO05D000283 3.7e-56 222.6 276 51.4
BcaB01g03208 Brassica carinata HOM05D000003 ORTHO05D000007 1.4e-55 220.7 138 73.2
BraA02t09306Z Brassica rapa HOM05D000003 ORTHO05D000007 3.2e-52 209.5 259 51.4
BcaC01g05180 Brassica carinata HOM05D000003 ORTHO05D000007 1.6e-51 207.2 123 74.0
C05p26910 Brassica napus HOM05D000003 ORTHO05D000007 2.7e-51 206.5 262 50.0
BcaC05g25979 Brassica carinata HOM05D000003 ORTHO05D000007 4.7e-51 205.7 266 48.5
BcaC04g21713 Brassica carinata HOM05D000003 ORTHO05D000007 2.3e-50 203.4 126 72.2
BcaB07g33765 Brassica carinata HOM05D000003 ORTHO05D000007 4.0e-50 202.6 125 71.2
BcaB01g02113 Brassica carinata HOM05D000003 ORTHO05D000283 6.8e-50 201.8 269 48.0
A03p52160 Brassica napus HOM05D000003 ORTHO05D000007 6.8e-50 201.8 170 60.6
A03p34860 Brassica napus HOM05D000003 ORTHO05D000007 8.8e-50 201.4 126 71.4
BraA01t03255Z Brassica rapa HOM05D000003 ORTHO05D000007 8.8e-50 201.4 228 49.1
BcaB07g30860 Brassica carinata HOM05D000003 ORTHO05D000007 1.2e-49 201.1 273 45.8
BolC9t55712H Brassica oleracea HOM05D000003 ORTHO05D000007 1.2e-49 201.1 126 71.4
C02p22170 Brassica napus HOM05D000003 ORTHO05D028000 1.5e-49 200.7 126 72.2
BcaB06g25889 Brassica carinata HOM05D000003 ORTHO05D000007 2.0e-49 200.3 122 73.0
Thhalv10000459m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 2.0e-49 200.3 122 74.6
A10p04200 Brassica napus HOM05D000003 ORTHO05D000007 2.6e-49 199.9 266 47.0
BolC5t32258H Brassica oleracea HOM05D000003 ORTHO05D000007 4.4e-49 199.1 123 70.7
BolC6t35819H Brassica oleracea HOM05D000003 ORTHO05D000007 7.5e-49 198.4 265 47.2
BolC9t58036H Brassica oleracea HOM05D000003 ORTHO05D000007 1.3e-48 197.6 240 47.1
A09p40210 Brassica napus HOM05D000003 ORTHO05D000007 1.7e-48 197.2 132 67.4
BraA09t39519Z Brassica rapa HOM05D000003 ORTHO05D000007 1.7e-48 197.2 132 67.4
Thhalv10015497m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 2.8e-48 196.4 125 68.8
Thhalv10022289m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 4.8e-48 195.7 277 45.1
BcaC08g45218 Brassica carinata HOM05D000003 ORTHO05D000007 1.1e-47 194.5 220 50.0
BcaC09g50945 Brassica carinata HOM05D000003 ORTHO05D000007 1.1e-47 194.5 220 49.5
BcaC08g43363 Brassica carinata HOM05D000003 ORTHO05D000007 1.4e-47 194.1 232 48.3
A06p28910 Brassica napus HOM05D000003 ORTHO05D000007 1.4e-47 194.1 123 69.1
BolC9t55311H Brassica oleracea HOM05D000003 ORTHO05D000007 2.4e-47 193.4 213 49.8
Thhalv10017665m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.2e-46 191.0 221 48.4
Thhalv10015367m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.6e-46 190.7 242 44.2
BcaC03g13859 Brassica carinata HOM05D000003 ORTHO05D000007 3.5e-46 189.5 253 48.6
Thhalv10017828m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 3.5e-46 189.5 134 62.7
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 4.5e-46 189.1 294 42.9
BraA05t20679Z Brassica rapa HOM05D000003 ORTHO05D000007 7.7e-46 188.3 155 58.7
CARHR110840 Cardamine hirsuta HOM05D000003 ORTHO05D000007 1.0e-45 188.0 125 67.2
Thhalv10002285m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 1.0e-45 188.0 266 42.5
BcaC01g00760 Brassica carinata HOM05D000003 ORTHO05D000007 1.7e-45 187.2 204 49.5
BraA04t18354Z Brassica rapa HOM05D000003 ORTHO05D000007 3.8e-45 186.0 122 68.9
BcaNung04603 Brassica carinata HOM05D000003 ORTHO05D000007 6.5e-45 185.3 108 73.1
Thhalv10003309m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 8.6e-45 184.9 134 61.2
BcaC04g23526 Brassica carinata HOM05D000003 ORTHO05D000007 5.5e-44 182.2 115 70.4
Thhalv10024027m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 7.2e-44 181.8 266 44.0
Thhalv10009475m.g Eutrema salsugineum HOM05D000003 ORTHO05D000007 2.8e-43 179.9 274 42.3
A03p33310 Brassica napus HOM05D000003 ORTHO05D000007 1.0e-42 177.9 273 39.9
BcaC02g09582 Brassica carinata HOM05D000003 ORTHO05D000007 2.3e-42 176.8 126 64.3
BcaB03g14792 Brassica carinata HOM05D000003 ORTHO05D000007 5.2e-42 175.6 273 41.8
BcaB08g36128 Brassica carinata HOM05D000003 ORTHO05D000007 6.8e-42 175.3 122 65.6
BcaC05g26008 Brassica carinata HOM05D000003 ORTHO05D000007 1.5e-41 174.1 272 41.2
BolC4t24667H Brassica oleracea HOM05D000003 ORTHO05D000007 4.4e-41 172.6 131 60.3
BcaNung03157 Brassica carinata HOM05D000003 ORTHO05D000007 8.3e-40 168.3 116 62.9
C01p16120 Brassica napus HOM05D000003 ORTHO05D000007 3.1e-39 166.4 269 42.0
BcaC04g20827 Brassica carinata HOM05D000003 ORTHO05D000007 3.5e-38 162.9 242 43.4
BolC9t56730H Brassica oleracea HOM05D000003 ORTHO05D000007 3.5e-38 162.9 242 43.4
BcaC07g37540 Brassica carinata HOM05D000003 ORTHO05D000007 4.5e-38 162.5 272 38.6
BcaNung01863 Brassica carinata HOM05D000003 ORTHO05D000007 4.5e-38 162.5 272 38.6
BraA06t25893Z Brassica rapa HOM05D000003 ORTHO05D000007 1.3e-37 161.0 125 61.6
C07p21920 Brassica napus HOM05D000003 ORTHO05D041027 4.3e-36 156.0 168 51.2
BcaB02g11235 Brassica carinata HOM05D000003 ORTHO05D000007 9.5e-36 154.8 272 40.8
BolC7t42724H Brassica oleracea HOM05D000003 ORTHO05D041027 1.2e-35 154.5 168 50.6
C08p23550 Brassica napus HOM05D000003 ORTHO05D000007 1.5e-33 147.5 68 97.1
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 1.7e-32 144.1 159 49.7
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 1.7e-32 144.1 159 49.7
C02p34560 Brassica napus HOM05D000003 ORTHO05D023912 1.4e-31 141.0 93 66.7
A01p34820 Brassica napus HOM05D000003 ORTHO05D000007 1.1e-28 131.3 85 69.4
BcaC05g27646 Brassica carinata HOM05D000003 ORTHO05D023912 2.1e-27 127.1 113 54.9
C05p36340 Brassica napus HOM05D000003 ORTHO05D023912 2.1e-27 127.1 113 54.9
BcaC04g18816 Brassica carinata HOM05D000003 ORTHO05D032545 8.0e-27 125.2 269 34.6
THA.LOC104798910 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 1.5e-25 120.9 124 45.2
BcaC05g26139 Brassica carinata HOM05D000003 ORTHO05D000007 2.0e-25 120.6 66 80.3
BcaC01g03259 Brassica carinata HOM05D000003 ORTHO05D000007 4.4e-25 119.4 289 33.2
BraA05t20378Z Brassica rapa HOM05D000003 ORTHO05D000007 9.8e-25 118.2 71 71.8
C01p24010 Brassica napus HOM05D065086 ORTHO05D032039 2.2e-24 117.1 243 39.1
THA.LOC104810236 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.2e-24 117.1 125 43.2
BolC2t07137H Brassica oleracea HOM05D000003 ORTHO05D000007 3.7e-24 116.3 66 75.8
THA.LOC109116097 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 4.9e-24 115.9 199 33.2
THA.LOC104803404 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 6.4e-24 115.5 250 34.0
BcaC09g48441 Brassica carinata HOM05D000003 ORTHO05D000007 1.1e-23 114.8 68 67.6
THA.LOC104799764 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 3.2e-23 113.2 120 40.0
THA.LOC104820083 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.0e-21 108.2 182 33.0
BolC1t01692H Brassica oleracea HOM05D000003 ORTHO05D000007 5.0e-21 105.9 66 66.7
BcaC02g11141 Brassica carinata HOM05D000003 ORTHO05D000007 1.5e-20 104.4 71 64.8
THA.LOC104810140 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 4.3e-20 102.8 241 28.2
BolC4t26086H Brassica oleracea HOM05D000003 ORTHO05D000007 9.5e-20 101.7 46 95.7
BolC8t49985H Brassica oleracea HOM05D000003 ORTHO05D000007 9.5e-20 101.7 46 95.7
BolC5t30822H Brassica oleracea HOM05D000003 ORTHO05D000007 1.8e-18 97.4 50 82.0
BraA09t36737Z Brassica rapa HOM05D000003 ORTHO05D000007 2.6e-17 93.6 58 69.0
THA.LOC104804985 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 2.6e-17 93.6 85 45.9
THA.LOC104804833 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 4.4e-17 92.8 224 30.4
THA.LOC104815137 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 7.5e-17 92.0 92 40.2
BraA07t28386Z Brassica rapa HOM05D000003 ORTHO05D000007 1.3e-16 91.3 68 55.9
THA.LOC104798687 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 1.3e-16 91.3 85 44.7
BolC3t19489H Brassica oleracea HOM05D000112 ORTHO05D032741 2.9e-16 90.1 117 44.4
THA.LOC104798680 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.9e-16 90.1 258 26.4
BcaB03g13717 Brassica carinata HOM05D000003 ORTHO05D032039 2.4e-15 87.0 73 57.5
THA.LOC104800051 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 5.4e-15 85.9 94 44.7
BolC3t18621H Brassica oleracea HOM05D000003 ORTHO05D000007 1.2e-14 84.7 82 45.1
BolC3t17711H Brassica oleracea HOM05D000003 ORTHO05D000007 2.1e-14 84.0 65 53.8
Carub.0007s3665 Capsella rubella HOM05D000848 ORTHO05D000007 2.7e-14 83.6 194 29.4
BcaB03g14903 Brassica carinata HOM05D039480 ORTHO05D000007 3.5e-14 83.2 177 42.4
C03p63630 Brassica napus HOM05D000003 ORTHO05D000007 6.0e-14 82.4 82 43.9
CARHR116590 Cardamine hirsuta HOM05D000848 ORTHO05D000007 3.9e-13 79.7 95 38.9
C04p08060 Brassica napus HOM05D000848 ORTHO05D000007 2.5e-12 77.0 116 32.8
THA.LOC104804698 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 3.3e-12 76.6 68 47.1
A06p30230 Brassica napus HOM05D000848 ORTHO05D027437 5.6e-12 75.9 122 32.0
BolC7t44685H Brassica oleracea HOM05D000848 ORTHO05D000007 7.3e-12 75.5 113 31.0
BcaC04g21229 Brassica carinata HOM05D003728 ORTHO05D000007 9.5e-12 75.1 184 27.2
C09p34120 Brassica napus HOM05D000848 ORTHO05D000007 9.5e-12 75.1 184 27.2
BolC9t56249H Brassica oleracea HOM05D003728 ORTHO05D000007 9.5e-12 75.1 184 27.2
Carub.0003s3035 Capsella rubella HOM05D000848 ORTHO05D000007 3.6e-11 73.2 121 32.2
C08p42150 Brassica napus HOM05D001783 ORTHO05D003692 8.1e-11 72.0 156 28.8
BolC8t51775H Brassica oleracea HOM05D001783 ORTHO05D003692 8.1e-11 72.0 156 28.8
THA.LOC104801863 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 1.1e-10 71.6 68 44.1
BcaB01g00854 Brassica carinata HOM05D000848 ORTHO05D000007 1.4e-10 71.2 129 29.5
BolC8t49500H Brassica oleracea HOM05D000848 ORTHO05D000007 1.8e-10 70.9 191 27.7
THA.LOC104807056 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 4.0e-10 69.7 65 43.1
C03p50040 Brassica napus HOM05D000848 ORTHO05D000007 6.8e-10 68.9 158 28.5
BolC3t17296H Brassica oleracea HOM05D000848 ORTHO05D000007 6.8e-10 68.9 158 28.5
BraA05t19984Z Brassica rapa HOM05D028159 ORTHO05D028005 1.2e-09 68.2 118 47.5
BolC9t57976H Brassica oleracea HOM05D000848 ORTHO05D000007 2.0e-09 67.4 167 25.7
BraA03t15318Z Brassica rapa HOM05D003728 ORTHO05D000007 5.8e-09 65.9 235 28.1
BolC5t32358H Brassica oleracea HOM05D000003 ORTHO05D023912 7.6e-09 65.5 51 58.8
BcaC07g38652 Brassica carinata HOM05D000848 ORTHO05D003342 9.9e-09 65.1 124 33.1
A01p06400 Brassica napus HOM05D000848 ORTHO05D000007 9.9e-09 65.1 182 27.5
C03p71920 Brassica napus HOM05D000112 ORTHO05D032741 9.9e-09 65.1 47 57.4
BolC3t19443H Brassica oleracea HOM05D003728 ORTHO05D000007 9.9e-09 65.1 103 31.1
BolC3t17049H Brassica oleracea HOM05D000848 ORTHO05D000007 2.2e-08 63.9 288 25.3
Aa31LG3G3110 Aethionema arabicum HOM05D000848 ORTHO05D000007 2.9e-08 63.5 206 23.3
A09p10540 Brassica napus HOM05D000848 ORTHO05D003342 2.9e-08 63.5 116 28.4
BolC5t33992H Brassica oleracea HOM05D000848 ORTHO05D000007 2.9e-08 63.5 92 30.4
BcaB01g00729 Brassica carinata HOM05D000848 ORTHO05D003342 3.8e-08 63.2 100 39.0
A06p19980 Brassica napus HOM05D000112 ORTHO05D010432 3.8e-08 63.2 116 37.9
THA.LOC104810234 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 6.4e-08 62.4 68 36.8
BcaB02g09790 Brassica carinata HOM05D000848 ORTHO05D003342 1.4e-07 61.2 231 26.8
BcaC03g15549 Brassica carinata HOM05D003728 ORTHO05D000006 1.4e-07 61.2 78 33.3
BcaC09g49472 Brassica carinata HOM05D000848 ORTHO05D003342 1.4e-07 61.2 223 28.3
C05p27570 Brassica napus HOM05D000848 ORTHO05D000007 2.4e-07 60.5 165 23.6
BolC5t31477H Brassica oleracea HOM05D000848 ORTHO05D000007 2.4e-07 60.5 165 23.6
C03p60610 Brassica napus HOM05D000003 ORTHO05D000007 4.1e-07 59.7 52 48.1
Carub.0001s4198 Capsella rubella HOM05D000848 ORTHO05D003342 4.1e-07 59.7 116 31.0
BcaB07g32650 Brassica carinata HOM05D000003 ORTHO05D000006 5.4e-07 59.3 93 31.2
BolC3t18316H Brassica oleracea HOM05D000003 ORTHO05D000007 5.4e-07 59.3 52 48.1
BcaC05g30433 Brassica carinata HOM05D000848 ORTHO05D000007 4.6e-06 56.2 135 24.4


User provided reference genes

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