Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p43580 Brassica napus HOM05D006142 ORTHO05D000013 2.0e-36 155.2 75 100.0
C01p14810 Brassica napus HOM05D006142 ORTHO05D000013 5.9e-33 143.7 75 93.3
BolC6t35503H Brassica oleracea HOM05D006142 ORTHO05D000013 3.2e-31 137.9 75 86.7
BraA07t31230Z Brassica rapa HOM05D000017 ORTHO05D000013 9.4e-31 136.3 75 86.7
BolC2t12305H Brassica oleracea HOM05D006142 ORTHO05D000013 1.6e-30 135.6 75 86.7
C04p36540 Brassica napus HOM05D006142 ORTHO05D000013 2.1e-30 135.2 75 86.7
A02p27070 Brassica napus HOM05D000017 ORTHO05D000013 2.2e-27 125.2 75 81.3
A02p36610 Brassica napus HOM05D000017 ORTHO05D000013 1.9e-23 112.1 75 73.3
BraA02t08656Z Brassica rapa HOM05D000017 ORTHO05D000013 1.9e-23 112.1 75 73.3
A01p19460 Brassica napus HOM05D000017 ORTHO05D000013 7.2e-23 110.2 75 73.3
C06p36610 Brassica napus HOM05D000017 ORTHO05D000013 7.2e-23 110.2 75 73.3
BolC4t25142H Brassica oleracea HOM05D000017 ORTHO05D000013 2.9e-16 88.2 46 91.3
BraA07t28119Z Brassica rapa HOM05D000017 ORTHO05D000013 1.1e-15 86.3 60 68.3
C03p72500 Brassica napus HOM05D000017 ORTHO05D000013 2.1e-14 82.0 76 55.3
A09p33970 Brassica napus HOM05D000017 ORTHO05D000013 8.8e-13 76.6 76 52.6
A09p29980 Brassica napus HOM05D000017 ORTHO05D000013 1.2e-12 76.3 57 66.7
BraA09t38561Z Brassica rapa HOM05D000017 ORTHO05D000013 1.2e-12 76.3 57 66.7
A05p25800 Brassica napus HOM05D000017 ORTHO05D000013 2.6e-12 75.1 57 64.9
C07p04730 Brassica napus HOM05D006142 ORTHO05D020039 3.4e-12 74.7 73 56.2
BolC2t09931H Brassica oleracea HOM05D000017 ORTHO05D000013 3.4e-12 74.7 76 51.3
A05p23500 Brassica napus HOM05D000017 ORTHO05D000013 4.4e-12 74.3 76 52.6
A05p09870 Brassica napus HOM05D000017 ORTHO05D000013 5.7e-12 73.9 46 78.3
A08p07910 Brassica napus HOM05D006142 ORTHO05D027476 5.3e-10 67.4 75 50.7
C04p39100 Brassica napus HOM05D000017 ORTHO05D000013 5.3e-10 67.4 76 47.4
BolC7t42636H Brassica oleracea HOM05D000017 ORTHO05D000013 7.0e-10 67.0 85 45.9
BolC2t10215H Brassica oleracea HOM05D000017 ORTHO05D000013 1.2e-09 66.2 76 47.4
Sp7g09080 Schrenkiella parvula HOM05D006142 ORTHO05D371143 4.5e-09 64.3 76 43.4
A08p09560 Brassica napus HOM05D000017 ORTHO05D000013 2.9e-08 61.6 68 44.1
C07p15550 Brassica napus HOM05D017180 ORTHO05D000013 2.9e-08 61.6 72 52.8
BolC7t42042H Brassica oleracea HOM05D017180 ORTHO05D000013 2.9e-08 61.6 72 52.8
Sp7g08090 Schrenkiella parvula HOM05D006142 ORTHO05D000013 2.9e-08 61.6 89 40.4
BolC8t48426H Brassica oleracea HOM05D006142 ORTHO05D000013 3.8e-08 61.2 73 45.2
BraA03t09392Z Brassica rapa HOM05D000017 ORTHO05D000013 3.8e-08 61.2 63 55.6
A01p24500 Brassica napus HOM05D000017 ORTHO05D000013 6.5e-08 60.5 54 61.1
A02p37010 Brassica napus HOM05D000017 ORTHO05D000013 1.1e-07 59.7 72 45.8
BraA02t08688Z Brassica rapa HOM05D000017 ORTHO05D000013 1.1e-07 59.7 72 45.8
C04p39380 Brassica napus HOM05D006142 ORTHO05D041830 1.5e-07 59.3 64 48.4
BolC4t25505H Brassica oleracea HOM05D006142 ORTHO05D041830 1.5e-07 59.3 64 48.4
TWI53G1455 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.9e-07 58.9 54 51.9
TWI74G0040 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.9e-07 58.9 56 50.0
TWI74G0780 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.9e-07 58.9 56 50.0
C05p16980 Brassica napus HOM05D006142 ORTHO05D000013 2.5e-07 58.5 55 54.5
BolC8t48132H Brassica oleracea HOM05D006142 ORTHO05D020039 2.5e-07 58.5 58 55.2
TWI38G2350 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.5e-07 58.5 54 51.9
TWI53G0141 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.5e-07 58.5 54 51.9
BraA07t28815Z Brassica rapa HOM05D000017 ORTHO05D000013 3.2e-07 58.2 84 40.5
TWI12G1375 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.2e-07 58.2 54 51.9
BolC7t43637H Brassica oleracea HOM05D000017 ORTHO05D000013 4.2e-07 57.8 53 60.4
Atru.chr8.859 Acer truncatum HOM05D000017 ORTHO05D000013 5.5e-07 57.4 62 43.5
BolC7t41625H Brassica oleracea HOM05D000017 ORTHO05D000013 7.2e-07 57.0 59 47.5
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-07 57.0 71 42.3
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 7.2e-07 57.0 71 42.3
Sopen08g018780 Solanum pennellii HOM05D000017 ORTHO05D000013 7.2e-07 57.0 70 42.9
A02p27280 Brassica napus HOM05D000017 ORTHO05D000013 9.4e-07 56.6 56 50.0
BolC1t02114H Brassica oleracea HOM05D000017 ORTHO05D000013 9.4e-07 56.6 63 50.8
BraA02t07753Z Brassica rapa HOM05D000017 ORTHO05D000013 9.4e-07 56.6 56 50.0
TWI18G0182 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.4e-07 56.6 56 50.0
Lj9A53T24 Lonicera japonica HOM05D000017 ORTHO05D000013 1.2e-06 56.2 67 46.3
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-06 56.2 71 42.3
Sopen08g017470 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-06 56.2 71 42.3
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-06 56.2 71 42.3
C06p10560 Brassica napus HOM05D000017 ORTHO05D000013 1.6e-06 55.8 59 47.5
BolC6t36137H Brassica oleracea HOM05D000017 ORTHO05D000013 1.6e-06 55.8 59 47.5
BraA08t34503Z Brassica rapa HOM05D000017 ORTHO05D000013 1.6e-06 55.8 77 42.9
Sopen05g009000 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-06 55.8 70 41.4
TWI18G0436 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-06 55.8 55 45.5
TWI39G1138 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-06 55.8 55 45.5
TWI63G1449 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-06 55.8 55 45.5
TWI74G0719 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-06 55.8 55 45.5
TWI77G0111 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-06 55.8 55 45.5
TWI77G0746 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-06 55.8 55 45.5
A01p22910 Brassica napus HOM05D006142 ORTHO05D020039 4.7e-06 54.3 73 45.2
BraA01t02204Z Brassica rapa HOM05D006142 ORTHO05D020039 4.7e-06 54.3 73 45.2
TWI63G0841 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.7e-06 54.3 51 49.0
Sopen05g015880 Solanum pennellii HOM05D000017 ORTHO05D000013 8.0e-06 53.5 69 40.6
Sopen12g022630 Solanum pennellii HOM05D000017 ORTHO05D000013 8.0e-06 53.5 69 40.6


User provided reference genes

Program Settings