Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 4.7e-266 920.6 458 100.0
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 5.2e-265 917.1 458 99.6
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 3.4e-264 914.4 458 99.1
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 2.7e-258 894.8 456 97.8
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 2.7e-258 894.8 456 97.8
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 5.0e-252 874.0 456 95.4
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 1.6e-234 815.8 456 89.3
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 2.4e-222 775.4 456 85.5
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 6.6e-220 767.3 456 85.3
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 1.3e-215 753.1 436 85.6
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 1.5e-203 713.0 456 78.1
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 1.4e-198 696.4 384 87.8
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 1.4e-177 626.7 438 72.6
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 4.2e-174 615.1 350 86.3
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 2.2e-154 549.7 445 61.6
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.9e-150 536.6 451 60.3
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 1.4e-148 530.4 452 59.7
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 2.0e-147 526.6 452 59.5
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 3.4e-147 525.8 441 60.8
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.7e-146 523.5 453 58.7
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 1.1e-145 520.8 466 58.4
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 5.9e-144 515.0 436 59.9
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 1.0e-143 514.2 443 58.7
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 1.0e-143 514.2 436 59.4
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 1.0e-143 514.2 440 58.9
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 4.2e-142 508.8 439 59.2
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 2.3e-140 503.1 478 56.9
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.2e-140 501.9 455 58.9
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 1.5e-139 500.4 430 56.7
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 5.7e-139 498.4 421 60.3
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.3e-138 497.3 438 59.1
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 2.2e-138 496.5 464 56.7
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 1.4e-137 493.8 444 57.9
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.4e-137 493.8 436 57.3
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 3.1e-137 492.7 433 57.7
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.6e-136 490.3 436 56.2
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.9e-136 488.4 436 56.0
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 5.9e-136 488.4 436 58.9
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.7e-135 486.9 436 56.0
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 6.6e-135 485.0 441 56.7
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 1.5e-134 483.8 433 56.8
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 3.3e-134 482.6 453 56.1
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 9.5e-134 481.1 443 56.9
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 3.6e-133 479.2 440 57.7
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 2.3e-132 476.5 471 54.6
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 1.5e-131 473.8 433 56.6
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 3.4e-131 472.6 438 54.1
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 4.4e-131 472.2 419 58.0
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 1.3e-130 470.7 455 54.9
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 4.9e-130 468.8 460 55.4
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 6.4e-130 468.4 452 54.2
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 8.3e-130 468.0 435 55.4
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 1.1e-129 467.6 421 55.6
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 1.1e-129 467.6 437 56.5
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 7.0e-129 464.9 443 56.0
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 7.0e-129 464.9 480 54.2
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 9.2e-129 464.5 446 56.1
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 9.2e-129 464.5 378 60.8
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.0e-128 463.4 424 55.7
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 2.3e-127 459.9 427 55.0
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 3.0e-127 459.5 419 55.4
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.2e-125 454.1 445 55.1
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 3.6e-125 452.6 380 60.3
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 6.2e-125 451.8 518 47.9
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 8.0e-125 451.4 424 55.0
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 8.0e-125 451.4 497 50.3
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 1.9e-121 440.3 434 51.4
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 7.0e-121 438.3 385 57.7
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 3.0e-119 433.0 436 51.8
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 5.0e-119 432.2 482 50.4
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.1e-118 431.0 387 57.6
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 1.5e-118 430.6 440 50.7
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 4.3e-118 429.1 385 56.4
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 3.6e-117 426.0 381 56.4
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 5.2e-116 422.2 426 52.3
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 2.6e-115 419.9 433 50.6
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 4.4e-115 419.1 442 48.9
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 5.8e-115 418.7 453 52.3
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 2.9e-114 416.4 380 55.8
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 2.4e-113 413.3 383 54.3
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 9.2e-113 411.4 440 50.0
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 1.2e-112 411.0 459 51.4
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 6.0e-112 408.7 444 51.8
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 7.8e-112 408.3 381 54.3
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 3.0e-111 406.4 380 54.7
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 3.6e-109 399.4 374 53.2
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 1.4e-105 387.5 379 53.8
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 2.1e-104 383.6 326 58.0
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.3e-103 380.9 430 45.1
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 1.1e-102 377.9 404 50.7
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 8.1e-101 371.7 506 42.1
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 1.2e-99 367.9 379 49.6
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 5.8e-99 365.5 438 46.1
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 6.4e-98 362.1 458 44.5
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 3.2e-97 359.8 442 45.2
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 1.2e-96 357.8 427 47.3
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 2.1e-96 357.1 426 48.6
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 1.7e-95 354.0 442 45.5
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 6.6e-95 352.1 463 45.8
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 9.6e-94 348.2 445 43.6
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 1.5e-91 340.9 455 42.9
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 1.5e-91 340.9 455 42.9
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 4.5e-91 339.3 469 43.9
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 8.4e-90 335.1 343 52.8
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 1.9e-89 334.0 464 44.2
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 7.1e-89 332.0 294 55.4
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 7.1e-89 332.0 438 43.8
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 5.1e-87 325.9 426 40.6
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 7.4e-86 322.0 432 39.1
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 1.4e-84 317.8 445 42.9
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 5.3e-84 315.8 387 45.7
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 4.5e-83 312.8 425 44.7
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 4.5e-83 312.8 445 42.5
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 4.5e-83 312.8 447 41.6
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.7e-82 310.8 472 42.4
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.4e-81 307.0 480 38.1
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 5.5e-81 305.8 397 44.1
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 5.1e-79 299.3 474 37.6
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 1.3e-77 294.7 349 47.6
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 9.7e-70 268.5 273 54.2
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 3.8e-66 256.5 396 37.9
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 5.0e-66 256.1 431 35.7
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 3.4e-51 206.8 278 41.7
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 5.9e-51 206.1 421 31.8
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 1.8e-23 114.8 147 43.5
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 3.4e-22 110.5 135 45.2
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 3.5e-11 73.9 64 64.1
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 6.6e-10 69.7 107 39.3
Lj1C795T1 Lonicera japonica HOM05D005756 ORTHO05D018916 1.2e-08 65.5 80 58.8
Hma1.2p1_0545F.1_g176010 Hydrangea macrophylla HOM05D005756 ORTHO05D018916 2.6e-06 57.8 57 59.6
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 4.4e-06 57.0 52 59.6
DCAR_019685 Daucus carota HOM05D005756 ORTHO05D018916 5.8e-06 56.6 79 45.6


User provided reference genes

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