Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p42960 Brassica napus HOM05D008747 ORTHO05D010943 8.7e-30 132.9 63 100.0
BNapus_Darmor_BZH_scaffold_287p00210 Brassica napus HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
C06p22940 Brassica napus HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
C06p23050 Brassica napus HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BolSC29t60478H Brassica oleracea HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BolSC29t60599H Brassica oleracea HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BolSC35t60658H Brassica oleracea HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BolSC46t61009H Brassica oleracea HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BolSC46t61026H Brassica oleracea HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BolSC47t61085H Brassica oleracea HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BraSC138t45564Z Brassica rapa HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BraSC25t45854Z Brassica rapa HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BraSC58t46433Z Brassica rapa HOM05D008747 ORTHO05D010943 2.6e-26 121.3 63 92.1
BolSC35t60740H Brassica oleracea HOM05D008747 ORTHO05D010943 2.3e-22 108.2 66 84.8
BraSC103t45476Z Brassica rapa HOM05D008747 ORTHO05D010943 2.5e-21 104.8 63 82.5
C02p28710 Brassica napus HOM05D008747 ORTHO05D010943 2.6e-18 94.7 63 77.8
BraSC58t46494Z Brassica rapa HOM05D008747 ORTHO05D010943 1.4e-16 89.0 66 77.3
Lalb_Chr07g0192051 Lupinus albus HOM05D008747 ORTHO05D010943 9.7e-13 76.3 41 85.4
Glyma.14G213500 Glycine max HOM05D008747 ORTHO05D010943 2.8e-12 74.7 41 82.9
Gohir.A12G229300 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.1e-11 72.8 41 82.9
Gohir.D01G102008 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.1e-11 72.8 41 82.9
Gohir.D12G107700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.1e-11 72.8 41 82.9
ATCG00065 Arabidopsis thaliana HOM05D008747 ORTHO05D010943 1.4e-11 72.4 38 86.8
Phvul.002G090400 Phaseolus vulgaris HOM05D008747 ORTHO05D010943 2.4e-11 71.6 41 80.5
Gohir.A03G081900 Gossypium hirsutum HOM05D008747 ORTHO05D010943 4.1e-11 70.9 41 80.5
Gohir.A06G008400 Gossypium hirsutum HOM05D008747 ORTHO05D010943 4.1e-11 70.9 41 80.5
Gohir.D07G185800 Gossypium hirsutum HOM05D008747 ORTHO05D010943 6.9e-11 70.1 41 78.0
Solyc00g500069.1 Solanum lycopersicum HOM05D008747 ORTHO05D010943 6.9e-11 70.1 37 86.5
Gohir.D07G175050 Gossypium hirsutum HOM05D008747 ORTHO05D010943 2.6e-10 68.2 39 79.5
arahy.Tifrunner.gnm1.ann1.HJLG3A Arachis hypogaea HOM05D008747 ORTHO05D010943 3.4e-10 67.8 43 74.4
Gohir.D06G104700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 3.4e-10 67.8 41 78.0
arahy.Tifrunner.gnm1.ann1.2D3TTC Arachis hypogaea HOM05D008747 ORTHO05D010943 5.9e-10 67.0 36 83.3
arahy.Tifrunner.gnm1.ann1.97L4DF Arachis hypogaea HOM05D008747 ORTHO05D010943 7.7e-10 66.6 35 85.7
Gohir.D06G125250 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.3e-09 65.9 41 75.6
Gohir.D06G113700 Gossypium hirsutum HOM05D008747 ORTHO05D010943 1.7e-09 65.5 41 75.6
arahy.Tifrunner.gnm1.ann1.VB0WZA Arachis hypogaea HOM05D008747 ORTHO05D010943 2.9e-09 64.7 43 72.1
Potri.001G305350 Populus trichocarpa HOM05D008747 ORTHO05D010943 2.9e-09 64.7 41 75.6
Gohir.D01G169000 Gossypium hirsutum HOM05D008747 ORTHO05D010943 3.8e-09 64.3 41 75.6
Gohir.D01G169110 Gossypium hirsutum HOM05D008747 ORTHO05D010943 6.5e-09 63.5 41 73.2
Solyc00g500254.1 Solanum lycopersicum HOM05D007792 ORTHO05D010943 6.5e-09 63.5 37 78.4
SGA_v2.0_scaffold479G52248 Striga asiatica HOM05D007792 ORTHO05D009931 1.9e-08 62.0 37 75.7
BNapus_Darmor_BZH_scaffold_253p00250 Brassica napus HOM05D008747 ORTHO05D010943 2.1e-07 58.5 28 96.4


User provided reference genes

Program Settings