Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p41960 Brassica napus HOM05D000053 ORTHO05D032112 8.8e-34 146.4 73 100.0
BolC4t25784H Brassica oleracea HOM05D000053 ORTHO05D032112 7.2e-28 126.7 72 90.3
BraA04t16515Z Brassica rapa HOM05D000053 ORTHO05D000035 1.6e-19 99.0 59 88.1
A04p08310 Brassica napus HOM05D000053 ORTHO05D000035 2.3e-18 95.1 59 83.1
BcaB02g08649 Brassica carinata HOM05D000053 ORTHO05D000035 6.3e-16 87.0 73 64.4
A04p08300 Brassica napus HOM05D000053 ORTHO05D000035 2.3e-13 78.6 59 72.9
BcaC02g09386 Brassica carinata HOM05D000053 ORTHO05D000035 3.3e-12 74.7 58 62.1
BraA04t16514Z Brassica rapa HOM05D000053 ORTHO05D000035 3.3e-12 74.7 59 69.5
AT4G13920 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 4.3e-12 74.3 58 70.7
Sp7g11600 Schrenkiella parvula HOM05D000053 ORTHO05D000035 1.2e-11 72.8 59 57.6
BcaB04g20561 Brassica carinata HOM05D000053 ORTHO05D000035 2.1e-11 72.0 60 70.0
BcaNung00360 Brassica carinata HOM05D000053 ORTHO05D000035 2.1e-11 72.0 59 66.1
Carub.0007s2863 Capsella rubella HOM05D000053 ORTHO05D000035 6.1e-11 70.5 58 60.3
BcaB01g00056 Brassica carinata HOM05D000053 ORTHO05D000035 8.0e-11 70.1 59 67.8
A01p23140 Brassica napus HOM05D000053 ORTHO05D000035 1.4e-10 69.3 60 58.3
Thhalv10026954m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 2.3e-10 68.6 58 63.8
Thhalv10024155m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 3.1e-10 68.2 59 66.1
C04p42050 Brassica napus HOM05D000053 ORTHO05D000035 5.2e-10 67.4 58 58.6
BolC4t25790H Brassica oleracea HOM05D000053 ORTHO05D000035 5.2e-10 67.4 58 58.6
AL7G42710 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 1.2e-09 66.2 58 58.6
A08p06550 Brassica napus HOM05D000053 ORTHO05D000035 1.2e-09 66.2 59 59.3
BolC4t25791H Brassica oleracea HOM05D000053 ORTHO05D000035 1.2e-09 66.2 58 58.6
BraA01t02224Z Brassica rapa HOM05D000053 ORTHO05D000035 1.2e-09 66.2 59 57.6
BraA04t16523Z Brassica rapa HOM05D000053 ORTHO05D000035 1.2e-09 66.2 58 58.6
BcaC02g09387 Brassica carinata HOM05D000053 ORTHO05D000035 1.5e-09 65.9 58 56.9
A01p23080 Brassica napus HOM05D000053 ORTHO05D000035 1.5e-09 65.9 60 63.3
C04p42070 Brassica napus HOM05D000053 ORTHO05D000035 1.5e-09 65.9 58 58.6
A01p23090 Brassica napus HOM05D000053 ORTHO05D000035 2.0e-09 65.5 59 57.6
CARHR219810 Cardamine hirsuta HOM05D000053 ORTHO05D000035 2.0e-09 65.5 62 62.9
BcaC07g39907 Brassica carinata HOM05D000053 ORTHO05D000035 2.6e-09 65.1 59 59.3
A04p08370 Brassica napus HOM05D000053 ORTHO05D000035 2.6e-09 65.1 58 56.9
A09p48840 Brassica napus HOM05D000053 ORTHO05D000035 2.6e-09 65.1 59 59.3
BolC8t50741H Brassica oleracea HOM05D000053 ORTHO05D000035 2.6e-09 65.1 59 59.3
BraA09t40339Z Brassica rapa HOM05D000053 ORTHO05D000035 2.6e-09 65.1 59 59.3
Sp7g11610 Schrenkiella parvula HOM05D000053 ORTHO05D000035 2.6e-09 65.1 60 61.7
C08p31190 Brassica napus HOM05D000053 ORTHO05D000035 4.4e-09 64.3 59 59.3
BcaNung00358 Brassica carinata HOM05D000053 ORTHO05D032112 5.8e-09 63.9 39 74.4
C01p28720 Brassica napus HOM05D000053 ORTHO05D000035 5.8e-09 63.9 59 59.3
BolC1t02799H Brassica oleracea HOM05D000053 ORTHO05D000035 5.8e-09 63.9 59 59.3
Carub.0015s0020 Capsella rubella HOM05D000053 ORTHO05D000035 7.5e-09 63.5 56 58.9
C01p28750 Brassica napus HOM05D000053 ORTHO05D000035 9.8e-09 63.2 59 55.9
CARHR219700 Cardamine hirsuta HOM05D000053 ORTHO05D000035 1.3e-08 62.8 59 57.6
AL7G42590 Arabidopsis lyrata HOM05D000053 ORTHO05D000035 2.2e-08 62.0 32 84.4
Carub.0005s1023 Capsella rubella HOM05D000053 ORTHO05D000035 2.2e-08 62.0 59 55.9
C08p07590 Brassica napus HOM05D000053 ORTHO05D000035 3.7e-08 61.2 59 55.9
BolC8t47606H Brassica oleracea HOM05D000053 ORTHO05D000035 3.7e-08 61.2 59 55.9
Thhalv10024378m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 6.4e-08 60.5 58 56.9
AT4G13810 Arabidopsis thaliana HOM05D000053 ORTHO05D000035 1.4e-07 59.3 56 57.1
BcaB01g00878 Brassica carinata HOM05D000053 ORTHO05D000035 1.4e-07 59.3 58 56.9
THA.LOC104818688 Tarenaya hassleriana HOM05D000053 ORTHO05D000035 1.4e-07 59.3 63 55.6
BraA01t02221Z Brassica rapa HOM05D000053 ORTHO05D000035 4.1e-07 57.8 59 54.2
BcaC08g46033 Brassica carinata HOM05D000053 ORTHO05D000035 5.4e-07 57.4 78 44.9
Thhalv10024443m.g Eutrema salsugineum HOM05D000053 ORTHO05D000035 7.0e-07 57.0 74 47.3
Prupe.4G169900 Prunus persica HOM05D001506 ORTHO05D000455 2.0e-06 55.5 39 64.1
CARHR118130 Cardamine hirsuta HOM05D000053 ORTHO05D000035 2.7e-06 55.1 72 51.4
CARHR127050 Cardamine hirsuta HOM05D000053 ORTHO05D000035 2.7e-06 55.1 68 47.1
A04p25610 Brassica napus HOM05D000053 ORTHO05D000035 3.5e-06 54.7 71 40.8
BraA04t18065Z Brassica rapa HOM05D000053 ORTHO05D000035 3.5e-06 54.7 71 40.8
Medtr8g087420 Medicago truncatula HOM05D000033 ORTHO05D001317 4.6e-06 54.3 67 43.3
Medtr1g099250 Medicago truncatula HOM05D000071 ORTHO05D000029 6.0e-06 53.9 47 57.4
THA.LOC104818686 Tarenaya hassleriana HOM05D000053 ORTHO05D000035 6.0e-06 53.9 58 44.8
A04p08350 Brassica napus HOM05D000053 ORTHO05D000035 7.8e-06 53.5 58 48.3
BraA08t32670Z Brassica rapa HOM05D000053 ORTHO05D000035 7.8e-06 53.5 60 50.0
Dinv36143 Davidia involucrata HOM05D000071 ORTHO05D000029 7.8e-06 53.5 41 58.5
TPR.G29245 Trifolium pratense HOM05D000071 ORTHO05D000029 7.8e-06 53.5 60 48.3


User provided reference genes

Program Settings