Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09020 Brassica carinata HOM05D001292 ORTHO05D001202 1.0e-85 320.1 170 100.0
C04p39440 Brassica napus HOM05D007244 ORTHO05D011635 1.0e-85 320.1 170 100.0
C04p39410 Brassica napus HOM05D007244 ORTHO05D011635 3.9e-85 318.2 170 98.8
BcaC02g09016 Brassica carinata HOM05D001292 ORTHO05D001202 1.3e-80 303.1 162 100.0
BolC4t25533H Brassica oleracea HOM05D000496 ORTHO05D000411 4.7e-54 214.9 114 100.0
C04p63540 Brassica napus HOM05D007244 ORTHO05D040510 5.4e-26 121.7 152 48.7
BraA08t34457Z Brassica rapa HOM05D007244 ORTHO05D040510 5.4e-26 121.7 152 48.7
C03p45520 Brassica napus HOM05D007244 ORTHO05D024067 4.3e-23 112.1 193 43.0
C09p64410 Brassica napus HOM05D007244 ORTHO05D000411 4.3e-23 112.1 157 48.4
A08p17800 Brassica napus HOM05D007244 ORTHO05D028076 9.6e-23 110.9 195 41.0
A07p33680 Brassica napus HOM05D000496 ORTHO05D000411 5.2e-21 105.1 196 40.3
BolC8t48551H Brassica oleracea HOM05D007244 ORTHO05D011635 1.2e-20 104.0 191 39.8
BolC1t04930H Brassica oleracea HOM05D007244 ORTHO05D024067 3.4e-20 102.4 128 51.6
C04p17430 Brassica napus HOM05D007244 ORTHO05D021589 4.4e-20 102.1 219 39.3
BraA02t05281Z Brassica rapa HOM05D007244 ORTHO05D027899 1.7e-19 100.1 169 45.6
C04p72950 Brassica napus HOM05D007244 ORTHO05D011635 2.2e-19 99.8 187 41.7
BcaC01g06431 Brassica carinata HOM05D000501 ORTHO05D000376 3.8e-19 99.0 197 39.6
A02p36210 Brassica napus HOM05D007244 ORTHO05D042440 4.9e-19 98.6 196 37.2
BcaC01g04059 Brassica carinata HOM05D007244 ORTHO05D024067 6.4e-19 98.2 149 45.0
BcaC09g48023 Brassica carinata HOM05D007244 ORTHO05D011635 1.4e-18 97.1 198 41.4
A06p08650 Brassica napus HOM05D007244 ORTHO05D011635 1.4e-18 97.1 190 38.4
BNapus_Darmor_BZH_scaffold_167p00080 Brassica napus HOM05D000496 ORTHO05D000411 3.2e-18 95.9 136 49.3
C03p76090 Brassica napus HOM05D007244 ORTHO05D027899 2.1e-17 93.2 167 44.3
BolC8t49580H Brassica oleracea HOM05D007244 ORTHO05D027899 2.1e-17 93.2 192 38.0
BolC7t40576H Brassica oleracea HOM05D007244 ORTHO05D039184 4.6e-17 92.0 233 33.5
C04p05140 Brassica napus HOM05D007244 ORTHO05D011635 7.8e-17 91.3 175 38.9
C08p13580 Brassica napus HOM05D000904 ORTHO05D006931 3.0e-16 89.4 196 33.7
BolC7t45144H Brassica oleracea HOM05D007244 ORTHO05D042440 3.0e-16 89.4 191 36.6
BolC2t07388H Brassica oleracea HOM05D000496 ORTHO05D000411 3.9e-16 89.0 169 41.4
BcaC02g11343 Brassica carinata HOM05D007244 ORTHO05D021589 5.1e-16 88.6 214 38.3
BcaB07g32388 Brassica carinata HOM05D000777 ORTHO05D000595 6.6e-16 88.2 128 46.1
BcaNung02915 Brassica carinata HOM05D001738 ORTHO05D001644 1.5e-15 87.0 178 38.8
A04p22240 Brassica napus HOM05D009832 ORTHO05D027185 2.5e-15 86.3 210 37.6
BraA04t17776Z Brassica rapa HOM05D009832 ORTHO05D027185 2.5e-15 86.3 210 37.6
BcaC03g17567 Brassica carinata HOM05D009169 ORTHO05D011621 3.3e-15 85.9 102 52.9
BolC8t48999H Brassica oleracea HOM05D007244 ORTHO05D011635 3.3e-15 85.9 194 33.5
BraA09t35781Z Brassica rapa HOM05D007244 ORTHO05D033844 1.3e-14 84.0 217 33.6
BcaC06g36660 Brassica carinata HOM05D007244 ORTHO05D039184 2.1e-14 83.2 215 32.6
A04p29850 Brassica napus HOM05D007244 ORTHO05D028076 2.1e-14 83.2 175 40.0
BraA04t18445Z Brassica rapa HOM05D007244 ORTHO05D028076 2.1e-14 83.2 175 40.0
BolC3t20591H Brassica oleracea HOM05D007244 ORTHO05D011635 2.8e-14 82.8 107 46.7
BcaB02g10259 Brassica carinata HOM05D004551 ORTHO05D005262 3.6e-14 82.4 193 31.1
BraA10t42654Z Brassica rapa HOM05D007244 ORTHO05D024067 4.8e-14 82.0 166 40.4
BcaC05g28718 Brassica carinata HOM05D007244 ORTHO05D011635 6.2e-14 81.6 83 56.6
A05p43470 Brassica napus HOM05D007244 ORTHO05D033750 6.2e-14 81.6 101 53.5
C03p83090 Brassica napus HOM05D007244 ORTHO05D011635 6.2e-14 81.6 84 57.1
BraA07t31383Z Brassica rapa HOM05D007244 ORTHO05D033750 6.2e-14 81.6 101 53.5
BolC6t35250H Brassica oleracea HOM05D007244 ORTHO05D015497 1.4e-13 80.5 208 36.1
BolC9t55947H Brassica oleracea HOM05D002126 ORTHO05D002195 5.3e-13 78.6 117 41.9
BolC4t23641H Brassica oleracea HOM05D007244 ORTHO05D011635 6.9e-13 78.2 125 46.4
BolC4t27676H Brassica oleracea HOM05D007244 ORTHO05D011635 1.5e-12 77.0 217 32.7
BolC3t21246H Brassica oleracea HOM05D007244 ORTHO05D024067 2.6e-12 76.3 130 43.1
BolC4t27796H Brassica oleracea HOM05D052731 ORTHO05D041045 2.6e-12 76.3 89 48.3
BolC7t40578H Brassica oleracea HOM05D007244 ORTHO05D028076 2.6e-12 76.3 71 59.2
BcaC01g01541 Brassica carinata HOM05D000081 ORTHO05D014497 3.4e-12 75.9 153 41.8
BcaC06g30752 Brassica carinata HOM05D007244 ORTHO05D039411 7.6e-12 74.7 82 53.7
C02p19710 Brassica napus HOM05D052731 ORTHO05D041045 7.6e-12 74.7 89 47.2
BolC7t44466H Brassica oleracea HOM05D007244 ORTHO05D039411 7.6e-12 74.7 82 53.7
BcaC02g06995 Brassica carinata HOM05D007244 ORTHO05D021589 9.9e-12 74.3 124 40.3
BolC7t41136H Brassica oleracea HOM05D045479 ORTHO05D042432 1.7e-11 73.6 181 34.3
BolC6t35336H Brassica oleracea HOM05D007244 ORTHO05D011635 1.1e-10 70.9 117 47.0
BcaC08g43238 Brassica carinata HOM05D007244 ORTHO05D094667 1.4e-10 70.5 92 46.7
BcaB05g21481 Brassica carinata HOM05D000048 ORTHO05D000436 1.9e-10 70.1 139 40.3
BolC4t27724H Brassica oleracea HOM05D007244 ORTHO05D027097 2.4e-10 69.7 169 36.7
BcaC01g02738 Brassica carinata HOM05D000042 ORTHO05D003657 5.4e-10 68.6 139 37.4
BcaC04g22876 Brassica carinata HOM05D007244 ORTHO05D011635 7.1e-10 68.2 73 52.1
BcaB06g28967 Brassica carinata HOM05D007244 ORTHO05D021589 9.3e-10 67.8 221 31.7
BcaC03g17553 Brassica carinata HOM05D000055 ORTHO05D093663 1.2e-09 67.4 193 34.2
C03p08760 Brassica napus HOM05D007244 ORTHO05D021882 1.2e-09 67.4 77 55.8
A05p03870 Brassica napus HOM05D007244 ORTHO05D027185 2.1e-09 66.6 109 42.2
BraA03t12268Z Brassica rapa HOM05D007244 ORTHO05D033844 2.1e-09 66.6 227 30.0
BcaB07g33891 Brassica carinata HOM05D007244 ORTHO05D011635 7.9e-09 64.7 96 46.9
C06p49860 Brassica napus HOM05D007244 ORTHO05D011635 1.0e-08 64.3 90 41.1
C03p17430 Brassica napus HOM05D007244 ORTHO05D021882 1.3e-08 63.9 119 45.4
BolC3t14675H Brassica oleracea HOM05D007244 ORTHO05D011635 1.3e-08 63.9 84 42.9
BraA08t33378Z Brassica rapa HOM05D007244 ORTHO05D011709 1.8e-08 63.5 126 38.1
BcaC03g14048 Brassica carinata HOM05D007244 ORTHO05D000411 3.0e-08 62.8 135 38.5
C08p13350 Brassica napus HOM05D013597 ORTHO05D017540 3.9e-08 62.4 150 38.7
C04p07250 Brassica napus HOM05D007244 ORTHO05D021882 8.7e-08 61.2 52 61.5
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.5e-07 60.5 140 33.6
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 1.5e-07 60.5 140 33.6
BcaB06g28278 Brassica carinata HOM05D007244 ORTHO05D039573 2.5e-07 59.7 112 40.2
BcaC07g39785 Brassica carinata HOM05D007244 ORTHO05D011635 2.5e-07 59.7 53 58.5
BcaC09g48969 Brassica carinata HOM05D007244 ORTHO05D011635 4.3e-07 58.9 71 49.3
BolC6t35262H Brassica oleracea HOM05D007244 ORTHO05D027097 4.3e-07 58.9 139 36.0
BolC7t43259H Brassica oleracea HOM05D007244 ORTHO05D105349 4.3e-07 58.9 174 37.4
BolC6t35913H Brassica oleracea HOM05D007244 ORTHO05D021882 5.6e-07 58.5 93 45.2
BcaC07g41124 Brassica carinata HOM05D000249 ORTHO05D000206 7.4e-07 58.2 111 35.1
BcaC09g48319 Brassica carinata HOM05D007244 ORTHO05D027185 7.4e-07 58.2 174 31.6
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 7.4e-07 58.2 136 34.6
BraA09t37805Z Brassica rapa HOM05D007244 ORTHO05D011635 7.4e-07 58.2 85 42.4
BcaB07g33461 Brassica carinata HOM05D007244 ORTHO05D032887 1.3e-06 57.4 72 48.6
BraA04t18504Z Brassica rapa HOM05D007244 ORTHO05D039573 1.3e-06 57.4 77 48.1
BcaB04g20713 Brassica carinata HOM05D007244 ORTHO05D011635 1.6e-06 57.0 99 44.4
BcaB03g16499 Brassica carinata HOM05D013597 ORTHO05D011635 2.8e-06 56.2 119 38.7
BraA06t27694Z Brassica rapa HOM05D007244 ORTHO05D027097 3.7e-06 55.8 160 32.5
C03p14600 Brassica napus HOM05D000496 ORTHO05D000411 4.8e-06 55.5 64 50.0
BolC5t29837H Brassica oleracea HOM05D007244 ORTHO05D021589 4.8e-06 55.5 70 48.6
BolC4t25172H Brassica oleracea HOM05D025388 ORTHO05D033844 6.2e-06 55.1 194 28.9
BcaB07g33782 Brassica carinata HOM05D007244 ORTHO05D021882 8.1e-06 54.7 77 42.9
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 8.1e-06 54.7 169 30.8
BolC5t33308H Brassica oleracea HOM05D007244 ORTHO05D011635 8.1e-06 54.7 72 50.0


User provided reference genes

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