Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g09171 Brassica carinata HOM05D042093 ORTHO05D027215 5.7e-66 254.2 138 100.0
C04p39260 Brassica napus HOM05D042093 ORTHO05D027215 5.7e-66 254.2 138 100.0
BolC4t25494H Brassica oleracea HOM05D042093 ORTHO05D027215 5.7e-66 254.2 138 100.0
BcaB02g08530 Brassica carinata HOM05D000279 ORTHO05D027215 5.0e-14 81.6 53 88.7
BcaB02g08267 Brassica carinata HOM05D000279 ORTHO05D000498 1.7e-09 66.6 56 69.6
A04p02620 Brassica napus HOM05D000279 ORTHO05D000498 1.1e-08 63.9 55 67.3
BraA04t15988Z Brassica rapa HOM05D000279 ORTHO05D000498 1.1e-08 63.9 55 69.1
CARHR168730 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.4e-08 63.5 54 70.4
AL5G40110 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 1.9e-08 63.2 56 66.1
Carub.0005s2515 Capsella rubella HOM05D000279 ORTHO05D000498 1.9e-08 63.2 56 66.1
BcaB02g07540 Brassica carinata HOM05D000279 ORTHO05D000498 3.2e-08 62.4 55 67.3
AL5G39980 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 4.1e-08 62.0 53 67.9
AT3G58360 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 4.1e-08 62.0 56 64.3
BcaB02g08268 Brassica carinata HOM05D000279 ORTHO05D000498 4.1e-08 62.0 53 67.9
BcaC02g10001 Brassica carinata HOM05D000279 ORTHO05D000498 4.1e-08 62.0 53 67.9
C04p34100 Brassica napus HOM05D000279 ORTHO05D000498 4.1e-08 62.0 53 67.9
BcaC02g10002 Brassica carinata HOM05D000279 ORTHO05D000498 9.2e-08 60.8 56 62.5
Sp5g04457 Schrenkiella parvula HOM05D000279 ORTHO05D000498 1.2e-07 60.5 54 68.5
AT3G58270 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.6e-07 60.1 55 61.8
BolC4t24973H Brassica oleracea HOM05D000279 ORTHO05D000498 1.6e-07 60.1 55 63.6
C06p25290 Brassica napus HOM05D000279 ORTHO05D000498 2.1e-07 59.7 80 53.8
BolC6t37690H Brassica oleracea HOM05D000279 ORTHO05D000498 2.1e-07 59.7 80 53.8
Carub.0005s2508 Capsella rubella HOM05D000279 ORTHO05D000498 3.5e-07 58.9 53 62.3
BcaC08g44907 Brassica carinata HOM05D000279 ORTHO05D000498 4.6e-07 58.5 55 61.8
C06p25260 Brassica napus HOM05D000279 ORTHO05D000498 4.6e-07 58.5 55 61.8
AL5G40000 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 7.8e-07 57.8 53 64.2
CARHR168640 Cardamine hirsuta HOM05D000279 ORTHO05D000498 7.8e-07 57.8 53 64.2
Thhalv10028109m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 7.8e-07 57.8 52 61.5
BolC9t59008H Brassica oleracea HOM05D000279 ORTHO05D000498 1.0e-06 57.4 56 57.1
Sp6g09200 Schrenkiella parvula HOM05D000279 ORTHO05D000498 1.7e-06 56.6 50 62.0
BcaB02g07538 Brassica carinata HOM05D000279 ORTHO05D000498 3.0e-06 55.8 55 61.8
CARHR259860 Cardamine hirsuta HOM05D000279 ORTHO05D000498 3.9e-06 55.5 55 56.4
Sp5g04500 Schrenkiella parvula HOM05D000279 ORTHO05D000498 5.1e-06 55.1 56 58.9


User provided reference genes

Program Settings