Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p39200 Brassica napus HOM05D039760 ORTHO05D022064 3.1e-27 124.4 63 100.0
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 1.5e-18 95.5 57 87.7
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 1.5e-18 95.5 57 87.7
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 1.5e-18 95.5 57 87.7
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 4.5e-18 94.0 57 86.0
AL4G31070 Arabidopsis lyrata HOM05D003281 ORTHO05D004128 5.5e-16 87.0 57 78.9
AT2G35040 Arabidopsis thaliana HOM05D003281 ORTHO05D004128 2.1e-15 85.1 57 77.2
Thhalv10016407m.g Eutrema salsugineum HOM05D003281 ORTHO05D004128 2.3e-14 81.6 57 75.4
BcaB02g09485 Brassica carinata HOM05D003281 ORTHO05D004128 6.7e-14 80.1 47 87.2
THA.LOC104814352 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 6.7e-14 80.1 55 74.5
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 6.3e-12 73.6 53 73.6
CARHR129210 Cardamine hirsuta HOM05D003281 ORTHO05D004128 4.1e-11 70.9 53 71.7
THA.LOC104798558 Tarenaya hassleriana HOM05D003281 ORTHO05D004128 1.7e-09 65.5 57 63.2
Carub.0004s1674 Capsella rubella HOM05D003281 ORTHO05D004128 5.0e-09 63.9 48 70.8
BraA09t41743Z Brassica rapa HOM05D000305 ORTHO05D000065 6.5e-09 63.5 41 80.5
Cpa.g.c33226 Carica papaya HOM05D003281 ORTHO05D004128 1.6e-07 58.9 59 64.4
Sabra10G0084400 Salix brachista HOM05D003281 ORTHO05D004128 2.1e-07 58.5 53 62.3
GSVIVG01012120001 Vitis vinifera HOM05D003281 ORTHO05D004128 2.1e-07 58.5 59 61.0
Potri.010G114400 Populus trichocarpa HOM05D003281 ORTHO05D004128 3.6e-07 57.8 59 57.6
A03p12860 Brassica napus HOM05D039760 ORTHO05D022064 4.6e-07 57.4 29 93.1
BraA03t10594Z Brassica rapa HOM05D039760 ORTHO05D022064 4.6e-07 57.4 29 93.1
Gohir.D01G111800 Gossypium hirsutum HOM05D003281 ORTHO05D004128 4.6e-07 57.4 52 61.5
Thecc.02G006200 Theobroma cacao HOM05D003281 ORTHO05D004128 4.6e-07 57.4 54 61.1
Manes.08G044300 Manihot esculenta HOM05D003281 ORTHO05D004128 7.9e-07 56.6 53 60.4
Ciclev10014669m.g Citrus clementina HOM05D003281 ORTHO05D004128 1.4e-06 55.8 60 58.3
Dinv18011 Davidia involucrata HOM05D003281 ORTHO05D004128 1.4e-06 55.8 55 52.7
Gorai.002G136700 Gossypium raimondii HOM05D003281 ORTHO05D004128 1.4e-06 55.8 52 59.6
Nn7g38195 Nelumbo nucifera HOM05D003281 ORTHO05D004128 1.4e-06 55.8 51 58.8
Dinv01965 Davidia involucrata HOM05D003281 ORTHO05D004128 1.8e-06 55.5 55 52.7
Nitab4.5_0000443g0070 Nicotiana tabacum HOM05D003281 ORTHO05D004128 1.8e-06 55.5 50 60.0
Nitab4.5_0006246g0040 Nicotiana tabacum HOM05D003281 ORTHO05D004128 1.8e-06 55.5 50 60.0
Glyma.04G133100 Glycine max HOM05D003281 ORTHO05D004128 2.3e-06 55.1 52 55.8
COL.COLO4_17637 Corchorus olitorius HOM05D003281 ORTHO05D004128 3.0e-06 54.7 53 54.7
Gohir.D12G047400 Gossypium hirsutum HOM05D003281 ORTHO05D004128 5.1e-06 53.9 56 58.9
Gorai.008G050100 Gossypium raimondii HOM05D003281 ORTHO05D004128 5.1e-06 53.9 56 58.9
Duzib132G1085 Durio zibethinus HOM05D003281 ORTHO05D004128 6.7e-06 53.5 53 58.5
Duzib248G1352 Durio zibethinus HOM05D003281 ORTHO05D004128 6.7e-06 53.5 53 58.5
Gohir.A12G048600 Gossypium hirsutum HOM05D003281 ORTHO05D004128 6.7e-06 53.5 56 58.9
Phvul.005G018700 Phaseolus vulgaris HOM05D003281 ORTHO05D004128 6.7e-06 53.5 53 56.6
QL11p013631 Quercus lobata HOM05D003281 ORTHO05D004128 6.7e-06 53.5 55 52.7
Atru.chr10.431 Acer truncatum HOM05D003281 ORTHO05D004128 8.8e-06 53.1 60 55.0
Gohir.A01G124000 Gossypium hirsutum HOM05D003281 ORTHO05D004128 8.8e-06 53.1 56 58.9


User provided reference genes

Program Settings