Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p37710 Brassica napus HOM05D000003 ORTHO05D014927 4.3e-36 154.1 74 100.0
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 2.2e-32 141.7 74 91.9
BraA08t34343Z Brassica rapa HOM05D000003 ORTHO05D014927 1.4e-31 139.0 74 90.5
BcaB05g22894 Brassica carinata HOM05D000003 ORTHO05D001498 5.8e-25 117.1 74 73.0
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 4.9e-24 114.0 73 74.0
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 1.9e-20 102.1 63 73.0
BcaC06g34794 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-18 95.5 72 59.7
C07p24620 Brassica napus HOM05D000003 ORTHO05D001498 1.8e-18 95.5 72 59.7
BolC7t42982H Brassica oleracea HOM05D000003 ORTHO05D001498 1.8e-18 95.5 72 59.7
BolC8t47955H Brassica oleracea HOM05D000003 ORTHO05D001498 9.0e-18 93.2 72 62.5
BraA10t42905Z Brassica rapa HOM05D000003 ORTHO05D001498 2.2e-16 88.6 72 54.2
BcaC06g35739 Brassica carinata HOM05D000003 ORTHO05D027234 9.3e-15 83.2 55 69.1
BcaC06g35891 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-13 79.3 73 49.3
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 1.3e-13 79.3 73 49.3
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 1.3e-13 79.3 73 49.3
BraA06t25211Z Brassica rapa HOM05D000003 ORTHO05D001498 1.3e-13 79.3 73 49.3
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 1.3e-13 79.3 73 49.3
BcaC09g50587 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-13 78.6 73 49.3
BolC6t35313H Brassica oleracea HOM05D000003 ORTHO05D001498 2.3e-13 78.6 73 49.3
BcaB06g26736 Brassica carinata HOM05D000003 ORTHO05D001498 5.1e-13 77.4 71 49.3
Carub.0007s3605 Capsella rubella HOM05D000003 ORTHO05D001498 2.5e-12 75.1 73 46.6
A03p62850 Brassica napus HOM05D000003 ORTHO05D001498 4.3e-12 74.3 48 70.8
BcaC05g27246 Brassica carinata HOM05D000003 ORTHO05D001498 9.6e-12 73.2 73 46.6
A03p66550 Brassica napus HOM05D000003 ORTHO05D016102 1.3e-11 72.8 74 50.0
BcaC08g45918 Brassica carinata HOM05D000003 ORTHO05D016102 1.6e-11 72.4 74 48.6
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-11 72.0 74 47.3
SpUn0003_0140 Schrenkiella parvula HOM05D000003 ORTHO05D014927 3.7e-11 71.2 71 46.5
BolC4t22151H Brassica oleracea HOM05D000914 ORTHO05D000718 1.1e-10 69.7 53 66.0
C04p24260 Brassica napus HOM05D000003 ORTHO05D014927 1.4e-10 69.3 58 56.9
BcaB04g17607 Brassica carinata HOM05D000003 ORTHO05D001498 2.4e-10 68.6 70 44.3
BcaB02g10126 Brassica carinata HOM05D000003 ORTHO05D016704 3.1e-10 68.2 70 45.7
BolC2t10194H Brassica oleracea HOM05D000003 ORTHO05D001498 3.1e-10 68.2 69 44.9
BolC4t23924H Brassica oleracea HOM05D000003 ORTHO05D014927 3.1e-10 68.2 58 55.2
BcaB01g02280 Brassica carinata HOM05D000003 ORTHO05D001498 5.3e-10 67.4 73 43.8
BcaB04g19028 Brassica carinata HOM05D000003 ORTHO05D000004 5.3e-10 67.4 71 43.7
BraA08t32742Z Brassica rapa HOM05D000003 ORTHO05D014927 5.3e-10 67.4 60 56.7
BcaC06g36398 Brassica carinata HOM05D000003 ORTHO05D014927 6.9e-10 67.0 66 50.0
C07p04560 Brassica napus HOM05D000003 ORTHO05D014927 6.9e-10 67.0 66 50.0
BolC7t46481H Brassica oleracea HOM05D000003 ORTHO05D001498 3.4e-09 64.7 73 45.2
BcaC08g44324 Brassica carinata HOM05D000003 ORTHO05D001498 4.5e-09 64.3 74 44.6
Sp7g03745 Schrenkiella parvula HOM05D000003 ORTHO05D001498 5.8e-09 63.9 74 40.5
BcaC03g13586 Brassica carinata HOM05D000003 ORTHO05D001498 7.6e-09 63.5 74 40.5
BcaC09g51068 Brassica carinata HOM05D000003 ORTHO05D001498 7.6e-09 63.5 72 38.9
Sp6g10470 Schrenkiella parvula HOM05D000003 ORTHO05D001498 7.6e-09 63.5 69 44.9
BcaC06g30852 Brassica carinata HOM05D000003 ORTHO05D015466 1.3e-08 62.8 71 42.3
BcaNung03952 Brassica carinata HOM05D000003 ORTHO05D016704 1.3e-08 62.8 71 42.3
BcaB07g33683 Brassica carinata HOM05D000003 ORTHO05D000006 1.7e-08 62.4 53 58.5
BcaB07g33494 Brassica carinata HOM05D000003 ORTHO05D001498 2.2e-08 62.0 71 39.4
C07p15960 Brassica napus HOM05D009133 ORTHO05D016102 2.2e-08 62.0 65 46.2
C07p15980 Brassica napus HOM05D009133 ORTHO05D016102 2.2e-08 62.0 65 46.2
Thhalv10009777m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 2.2e-08 62.0 74 41.9
Thhalv10026817m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 2.2e-08 62.0 74 40.5
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 2.9e-08 61.6 74 41.9
BraA09t36313Z Brassica rapa HOM05D000003 ORTHO05D001498 2.9e-08 61.6 74 43.2
BcaC02g07192 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-08 61.2 70 41.4
BcaB06g29528 Brassica carinata HOM05D000003 ORTHO05D001498 4.9e-08 60.8 74 43.2
BcaB03g16045 Brassica carinata HOM05D000003 ORTHO05D001498 6.5e-08 60.5 73 43.8
BcaB07g33879 Brassica carinata HOM05D000003 ORTHO05D015466 6.5e-08 60.5 73 43.8
C07p34510 Brassica napus HOM05D009133 ORTHO05D016102 6.5e-08 60.5 65 46.2
BolC7t43982H Brassica oleracea HOM05D009133 ORTHO05D016102 6.5e-08 60.5 65 46.2
BcaNung00269 Brassica carinata HOM05D000003 ORTHO05D001498 8.4e-08 60.1 70 41.4
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 1.1e-07 59.7 74 40.5
BolC7t43105H Brassica oleracea HOM05D000003 ORTHO05D001498 1.1e-07 59.7 70 38.6
BcaB04g18843 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-07 59.3 73 35.6
C02p54220 Brassica napus HOM05D009133 ORTHO05D016102 1.4e-07 59.3 63 44.4
BcaC09g49335 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-07 58.9 74 41.9
BcaC02g12768 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-07 58.5 70 40.0
BcaC03g16617 Brassica carinata HOM05D000003 ORTHO05D000411 2.5e-07 58.5 74 40.5
BcaC08g46350 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-07 58.5 74 39.2
C06p40810 Brassica napus HOM05D000003 ORTHO05D001498 2.5e-07 58.5 74 39.2
BolC6t39352H Brassica oleracea HOM05D000003 ORTHO05D001498 2.5e-07 58.5 74 39.2
BcaB02g07356 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-07 58.2 68 42.6
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 4.2e-07 57.8 70 38.6
BcaB07g32628 Brassica carinata HOM05D000003 ORTHO05D001498 4.2e-07 57.8 70 41.4
BcaC09g47726 Brassica carinata HOM05D000003 ORTHO05D016043 4.2e-07 57.8 68 39.7
BcaC09g47764 Brassica carinata HOM05D000003 ORTHO05D016043 4.2e-07 57.8 68 39.7
BcaB06g25892 Brassica carinata HOM05D000003 ORTHO05D001498 5.5e-07 57.4 74 40.5
C06p09100 Brassica napus HOM05D009133 ORTHO05D016102 5.5e-07 57.4 65 43.1
BcaB04g17941 Brassica carinata HOM05D000003 ORTHO05D000004 7.1e-07 57.0 73 39.7
BcaNung03323 Brassica carinata HOM05D000003 ORTHO05D016015 7.1e-07 57.0 73 39.7
BcaC02g12838 Brassica carinata HOM05D000003 ORTHO05D001498 9.3e-07 56.6 74 36.5
BcaC08g46757 Brassica carinata HOM05D000003 ORTHO05D001498 9.3e-07 56.6 71 39.4
BcaC04g19472 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 56.2 74 37.8
BcaC04g24062 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 56.2 70 34.3
BcaC06g35222 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 56.2 74 39.2
BcaNung01080 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 56.2 73 41.1
BolC3t18634H Brassica oleracea HOM05D000003 ORTHO05D001498 1.2e-06 56.2 47 53.2
Sp6g06080 Schrenkiella parvula HOM05D000003 ORTHO05D001498 1.2e-06 56.2 73 37.0
BcaC06g36425 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-06 55.8 67 37.3
BolC8t51213H Brassica oleracea HOM05D000003 ORTHO05D016043 2.1e-06 55.5 68 38.2
BcaC04g21635 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-06 55.1 74 36.5
BcaC01g05810 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-06 54.7 68 41.2
BcaC06g33814 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-06 54.7 73 45.2
BcaC01g01226 Brassica carinata HOM05D000003 ORTHO05D001498 4.6e-06 54.3 68 38.2
BolC3t21277H Brassica oleracea HOM05D000003 ORTHO05D016043 4.6e-06 54.3 68 38.2
BolC7t44586H Brassica oleracea HOM05D000003 ORTHO05D016043 4.6e-06 54.3 68 38.2
BcaB02g10016 Brassica carinata HOM05D000003 ORTHO05D019978 6.0e-06 53.9 56 46.4
BcaC08g43351 Brassica carinata HOM05D000003 ORTHO05D001498 6.0e-06 53.9 70 38.6
BcaC01g05506 Brassica carinata HOM05D000003 ORTHO05D001498 7.9e-06 53.5 68 36.8
BcaC03g18169 Brassica carinata HOM05D000003 ORTHO05D001498 7.9e-06 53.5 70 38.6
BcaC06g34829 Brassica carinata HOM05D000003 ORTHO05D001498 7.9e-06 53.5 68 38.2
C07p48220 Brassica napus HOM05D000003 ORTHO05D016704 7.9e-06 53.5 71 36.6
BolC7t42827H Brassica oleracea HOM05D000003 ORTHO05D016043 7.9e-06 53.5 68 38.2


User provided reference genes

Program Settings