Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p37080 Brassica napus HOM05D034669 ORTHO05D000395 5.5e-88 327.8 188 100.0
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 4.9e-12 75.5 52 71.2
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 6.4e-12 75.1 50 74.0
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 6.4e-12 75.1 50 74.0
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 6.4e-12 75.1 50 74.0
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 9.3e-11 71.2 50 70.0
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-10 70.5 50 70.0
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-10 68.9 51 68.6
BraA01t02128Z Brassica rapa HOM05D001038 ORTHO05D000395 4.6e-10 68.9 47 74.5
BraA04t16796Z Brassica rapa HOM05D001038 ORTHO05D000395 4.6e-10 68.9 50 68.0
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 7.9e-10 68.2 50 70.0
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 7.9e-10 68.2 50 70.0
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-09 67.4 50 66.0
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-09 67.0 46 67.4
BolC1t02942H Brassica oleracea HOM05D034669 ORTHO05D041378 1.8e-09 67.0 71 57.7
BcaB02g07256 Brassica carinata HOM05D001038 ORTHO05D024222 3.9e-09 65.9 50 66.0
BcaB08g36368 Brassica carinata HOM05D001038 ORTHO05D000395 8.7e-09 64.7 46 67.4
BraA02t08904Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-08 64.3 50 62.0
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-08 64.3 50 66.0
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-08 63.9 46 67.4
BraA08t34502Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-08 63.9 46 67.4
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-08 63.5 46 67.4
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-08 63.5 46 67.4
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 2.5e-08 63.2 46 69.6
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-08 62.4 50 64.0
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 4.3e-08 62.4 46 63.0
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 5.6e-08 62.0 46 60.9
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 5.6e-08 62.0 46 60.9
BolC5t30492H Brassica oleracea HOM05D001038 ORTHO05D000395 9.6e-08 61.2 46 67.4
BraA06t25335Z Brassica rapa HOM05D001038 ORTHO05D000395 9.6e-08 61.2 46 60.9
BraA06t25652Z Brassica rapa HOM05D001038 ORTHO05D000395 9.6e-08 61.2 46 60.9
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-07 59.7 46 63.0
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-07 59.7 50 62.0
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-07 59.7 46 63.0
A02p12570 Brassica napus HOM05D001038 ORTHO05D000395 2.8e-07 59.7 45 64.4
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 2.8e-07 59.7 46 65.2
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 3.7e-07 59.3 46 67.4
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 3.7e-07 59.3 46 60.9
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 8.1e-07 58.2 46 60.9
A04p08060 Brassica napus HOM05D001038 ORTHO05D000395 8.1e-07 58.2 46 63.0
A06p16020 Brassica napus HOM05D001038 ORTHO05D024222 1.1e-06 57.8 40 72.5
A06p36110 Brassica napus HOM05D001038 ORTHO05D024222 1.1e-06 57.8 40 72.5
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-06 57.4 46 63.0
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 1.4e-06 57.4 46 58.7
C03p47220 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-06 57.0 46 63.0
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 1.8e-06 57.0 46 60.9
BcaB08g35415 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-06 56.2 45 60.0
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-06 55.8 50 60.0
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 4.0e-06 55.8 46 60.9
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 4.0e-06 55.8 46 63.0
C09p50150 Brassica napus HOM05D001038 ORTHO05D000395 4.0e-06 55.8 45 64.4
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 4.0e-06 55.8 46 63.0
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 5.3e-06 55.5 42 69.0
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 5.3e-06 55.5 46 65.2
BolC7t40990H Brassica oleracea HOM05D001957 ORTHO05D002015 5.3e-06 55.5 46 60.9
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 5.3e-06 55.5 46 65.2
A03p30780 Brassica napus HOM05D001038 ORTHO05D000395 6.9e-06 55.1 46 58.7
BcaC04g19884 Brassica carinata HOM05D001038 ORTHO05D000395 9.0e-06 54.7 45 64.4


User provided reference genes

Program Settings