Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p36410 Brassica napus HOM05D002586 ORTHO05D007521 3.6e-128 461.5 215 100.0
BolC4t25154H Brassica oleracea HOM05D002586 ORTHO05D007521 2.9e-117 425.2 201 99.5
A09p49100 Brassica napus HOM05D002586 ORTHO05D007521 5.0e-53 211.8 134 78.4
BraA09t40362Z Brassica rapa HOM05D002586 ORTHO05D007521 5.0e-53 211.8 134 78.4
BcaB01g00029 Brassica carinata HOM05D002586 ORTHO05D007521 2.5e-52 209.5 135 77.0
Sp5g06410 Schrenkiella parvula HOM05D002586 ORTHO05D007521 5.6e-52 208.4 133 78.2
CARHR166270 Cardamine hirsuta HOM05D002586 ORTHO05D007521 2.8e-51 206.1 133 78.2
AT3G56120 Arabidopsis thaliana HOM05D002586 ORTHO05D007521 1.4e-50 203.8 130 78.5
AL5G37440 Arabidopsis lyrata HOM05D002586 ORTHO05D007521 4.0e-50 202.2 133 75.9
Thhalv10005971m.g Eutrema salsugineum HOM05D002586 ORTHO05D007521 5.2e-50 201.8 133 75.2
Aa31LG10G11030 Aethionema arabicum HOM05D002586 ORTHO05D007521 3.4e-49 199.1 133 74.4
BcaC07g39927 Brassica carinata HOM05D002586 ORTHO05D007521 1.7e-48 196.8 126 78.6
BolC8t50763H Brassica oleracea HOM05D002586 ORTHO05D007521 1.7e-48 196.8 126 78.6
Carub.0005s2287 Capsella rubella HOM05D002586 ORTHO05D007521 8.3e-48 194.5 133 72.9
C08p31420 Brassica napus HOM05D002586 ORTHO05D007521 9.2e-47 191.0 113 81.4
THA.LOC104811104 Tarenaya hassleriana HOM05D002586 ORTHO05D007521 3.1e-42 176.0 133 64.7
Manes.03G068300 Manihot esculenta HOM05D002586 ORTHO05D007521 3.9e-37 159.1 123 65.0
Duzib187G1530 Durio zibethinus HOM05D002586 ORTHO05D007521 5.6e-36 155.2 123 62.6
Sabra18G0064400 Salix brachista HOM05D002586 ORTHO05D007521 6.2e-35 151.8 126 58.7
COL.COLO4_34935 Corchorus olitorius HOM05D002586 ORTHO05D007521 8.1e-35 151.4 121 62.8
Thecc.09G114900 Theobroma cacao HOM05D002586 ORTHO05D007521 8.1e-35 151.4 135 55.6
Gorai.010G068800 Gossypium raimondii HOM05D000417 ORTHO05D000342 1.1e-34 151.0 123 63.4
Glyma.05G012700 Glycine max HOM05D002586 ORTHO05D007521 4.0e-34 149.1 122 61.5
CANSAT56G1449 Cannabis sativa HOM05D002586 ORTHO05D007521 5.2e-34 148.7 145 54.5
RcHm_v2.0_Chr2g0091071 Rosa chinensis HOM05D002586 ORTHO05D007521 5.2e-34 148.7 122 62.3
Gohir.A06G060550 Gossypium hirsutum HOM05D000417 ORTHO05D007521 1.2e-33 147.5 123 61.8
QL02p086119 Quercus lobata HOM05D002586 ORTHO05D007521 1.5e-33 147.1 121 59.5
Haze_25681 Corylus avellana HOM05D002586 ORTHO05D007521 2.0e-33 146.7 123 59.3
Dinv41576 Davidia involucrata HOM05D005850 ORTHO05D007405 3.4e-33 146.0 186 45.2
Manes.16G065000 Manihot esculenta HOM05D002586 ORTHO05D007521 3.4e-33 146.0 120 61.7
Cfa003292 Carpinus fangiana HOM05D000417 ORTHO05D000342 4.4e-33 145.6 123 57.7
Lalb_Chr21g0316611 Lupinus albus HOM05D002586 ORTHO05D007521 4.4e-33 145.6 125 58.4
Potri.018G072200 Populus trichocarpa HOM05D002586 ORTHO05D007521 7.6e-33 144.8 121 57.9
PGR142G2078 Punica granatum HOM05D002586 ORTHO05D007521 9.9e-33 144.4 133 54.9
Glyma.17G120833 Glycine max HOM05D002586 ORTHO05D007521 1.3e-32 144.1 122 59.0
TPR.G26750 Trifolium pratense HOM05D002586 ORTHO05D007521 1.7e-32 143.7 121 60.3
Ca_02541_v3 Cicer arietinum L. HOM05D002586 ORTHO05D007521 2.9e-32 142.9 144 55.6
Lalb_Chr08g0235011 Lupinus albus HOM05D002586 ORTHO05D007521 3.8e-32 142.5 150 50.7
arahy.Tifrunner.gnm1.ann1.0DQ71P Arachis hypogaea HOM05D002586 ORTHO05D007521 6.4e-32 141.7 138 53.6
Cc10_g11950 Coffea canephora HOM05D002586 ORTHO05D007521 8.4e-32 141.4 164 47.6
Medtr4g112015 Medicago truncatula HOM05D002586 ORTHO05D007521 1.4e-31 140.6 122 58.2
arahy.Tifrunner.gnm1.ann1.7815EC Arachis hypogaea HOM05D002586 ORTHO05D007521 1.9e-31 140.2 120 58.3
FvH4_1g05380 Fragaria vesca HOM05D002586 ORTHO05D007521 1.9e-31 140.2 122 58.2
FAN19G1865 Fragaria x ananassa HOM05D002586 ORTHO05D007521 1.9e-31 140.2 122 58.2
CiPaw.03G235200 Carya illinoinensis HOM05D002586 ORTHO05D007521 2.4e-31 139.8 119 58.0
Sc18g0001020 Simmondsia chinensis HOM05D002586 ORTHO05D007521 2.4e-31 139.8 121 58.7
ClCG11G002640 Citrullus lanatus HOM05D002586 ORTHO05D007521 3.2e-31 139.4 139 51.1
Eucgr.C01077 Eucalyptus grandis HOM05D002586 ORTHO05D007521 4.1e-31 139.0 204 41.7
Atru.chr7.1294 Acer truncatum HOM05D000417 ORTHO05D000342 5.4e-31 138.7 123 56.9
PSO210G4513 Papaver somniferum HOM05D002586 ORTHO05D007521 5.4e-31 138.7 209 42.6
CsaV3_2G002470 Cucumis sativus L. HOM05D002586 ORTHO05D007521 9.2e-31 137.9 139 51.1
Lj4g0022349 Lotus japonicus HOM05D002586 ORTHO05D007521 9.2e-31 137.9 174 47.7
MD02G1062400 Malus domestica HOM05D002586 ORTHO05D007521 9.2e-31 137.9 123 56.9
Phvul.003G176601 Phaseolus vulgaris HOM05D002586 ORTHO05D007521 9.2e-31 137.9 122 56.6
FAN26G0906 Fragaria x ananassa HOM05D002586 ORTHO05D007521 1.2e-30 137.5 122 57.4
FAN26G3367 Fragaria x ananassa HOM05D002586 ORTHO05D007521 1.2e-30 137.5 122 57.4
Lsat_1_v5_gn_5_99861 Lactuca sativa HOM05D002586 ORTHO05D007521 1.2e-30 137.5 123 59.3
Hund26118 Selenicereus undatus HOM05D002586 ORTHO05D007521 1.2e-30 137.5 118 61.0
ECA234G2455 Erigeron canadensis HOM05D000417 ORTHO05D007521 3.5e-30 136.0 183 43.2
HanXRQChr12g0355841 Helianthus annuus HOM05D002586 ORTHO05D007521 3.5e-30 136.0 161 47.8
Psat4g043160 Pisum sativum HOM05D002586 ORTHO05D007521 3.5e-30 136.0 122 59.0
Rhsim03G0244900 Rhododendron simsii HOM05D002586 ORTHO05D007521 4.6e-30 135.6 188 44.1
TAR383G0369 Trochodendron aralioides HOM05D002586 ORTHO05D007521 4.6e-30 135.6 119 56.3
vmacro06194 Vaccinium macrocarpon HOM05D002586 ORTHO05D007521 6.0e-30 135.2 123 56.1
HanXRQChr10g0317371 Helianthus annuus HOM05D002586 ORTHO05D007521 1.0e-29 134.4 123 56.9
AUR62011030 Chenopodium quinoa HOM05D002586 ORTHO05D007521 1.3e-29 134.0 118 61.0
AUR62033403 Chenopodium quinoa HOM05D002586 ORTHO05D007521 1.7e-29 133.7 111 63.1
FAN23G1201 Fragaria x ananassa HOM05D000417 ORTHO05D007521 1.7e-29 133.7 120 57.5
TWI34G1303 Tripterygium wilfordii HOM05D002586 ORTHO05D007521 2.3e-29 133.3 155 48.4
EL10Ac8g18544 Beta vulgaris HOM05D002586 ORTHO05D007521 3.0e-29 132.9 134 54.5
Cpa.g.sc23.143 Carica papaya HOM05D002586 ORTHO05D007521 3.0e-29 132.9 156 46.8
DCAR_028731 Daucus carota HOM05D002250 ORTHO05D007521 3.0e-29 132.9 137 51.8
PSO170G5904 Papaver somniferum HOM05D002586 ORTHO05D007521 8.6e-29 131.3 114 58.8
Sed0019430 Sechium edule HOM05D002586 ORTHO05D007521 8.6e-29 131.3 122 55.7
Zm00001eb184100 Zea mays HOM05D002586 ORTHO05D007521 8.6e-29 131.3 132 53.0
Peaxi162Scf00560g00619 Petunia axillaris HOM05D002586 ORTHO05D007521 1.1e-28 131.0 114 60.5
CSS0035000 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 1.5e-28 130.6 138 48.6
MELO3C004542.2 Cucumis melo HOM05D002586 ORTHO05D007521 1.5e-28 130.6 153 49.0
Nn7g36037 Nelumbo nucifera HOM05D002586 ORTHO05D007521 1.9e-28 130.2 102 59.8
Nitab4.5_0000066g0020 Nicotiana tabacum HOM05D002586 ORTHO05D007521 3.3e-28 129.4 114 58.8
GSVIVG01015435001 Vitis vinifera HOM05D000417 ORTHO05D000342 7.3e-28 128.3 106 62.3
SalBow1G1951 Salvia bowleyana HOM05D002586 ORTHO05D007521 9.6e-28 127.9 104 62.5
unitig_46.g18492 Utricularia gibba HOM05D002586 ORTHO05D007521 9.6e-28 127.9 106 62.3
ATR0605G072 Amborella trichopoda HOM05D002586 ORTHO05D007521 1.2e-27 127.5 119 53.8
Ciclev10007363m.g Citrus clementina HOM05D000417 ORTHO05D000342 1.6e-27 127.1 134 49.3
Migut.D02058 Erythranthe guttata HOM05D002586 ORTHO05D007521 2.1e-27 126.7 112 58.0
Hma1.2p1_1968F.1_g309470 Hydrangea macrophylla HOM05D002586 ORTHO05D007521 3.6e-27 125.9 183 41.5
CSS0041277 Camellia sinensis var. sinensis HOM05D002586 ORTHO05D007521 6.2e-27 125.2 140 49.3
Hma1.2p1_1968F.1_g309480 Hydrangea macrophylla HOM05D002586 ORTHO05D007521 8.1e-27 124.8 147 46.9
Solyc05g006200.4 Solanum lycopersicum HOM05D002586 ORTHO05D007521 1.4e-26 124.0 114 57.9
Sopen05g002210 Solanum pennellii HOM05D002586 ORTHO05D007521 1.4e-26 124.0 114 57.9
PGSC0003DMG402015580 Solanum tuberosum HOM05D002586 ORTHO05D007521 1.4e-26 124.0 114 57.9
HPP92_026033 Vanilla planifolia HOM05D002586 ORTHO05D007521 1.8e-26 123.6 123 50.4
CAN.G444.6 Capsicum annuum HOM05D002586 ORTHO05D007521 5.2e-26 122.1 114 57.9
Oeu034436.1 Olea europaea HOM05D000066 ORTHO05D000055 8.9e-26 121.3 119 56.3
DCAR_016972 Daucus carota HOM05D002586 ORTHO05D007521 1.2e-25 120.9 117 52.1
arahy.Tifrunner.gnm1.ann1.79CRDV Arachis hypogaea HOM05D002586 ORTHO05D007521 2.0e-25 120.2 101 57.4
MBI01_g20396_MAGBIO Magnolia biondii HOM05D002586 ORTHO05D007521 2.0e-25 120.2 122 54.9
Prupe.7G227000 Prunus persica HOM05D000417 ORTHO05D000342 2.6e-25 119.8 101 58.4
arahy.Tifrunner.gnm1.ann1.QVF5JZ Arachis hypogaea HOM05D002586 ORTHO05D007521 3.8e-24 115.9 100 56.0
CDE05G1766 Ceratophyllum demersum HOM05D001816 ORTHO05D002001 2.4e-23 113.2 102 53.9
Aqoxy4G02394 Aquilegia oxysepala HOM05D002586 ORTHO05D007521 3.5e-22 109.4 129 46.5
Gohir.D06G058900 Gossypium hirsutum HOM05D002586 ORTHO05D007521 1.3e-21 107.5 75 68.0
Lj7A641G78 Lonicera japonica HOM05D002586 ORTHO05D007521 2.8e-19 99.8 86 60.5
Pp3c17_17170 Physcomitrium patens HOM05D002586 ORTHO05D007521 3.6e-19 99.4 147 38.8
Mapoly0022s0148 Marchantia polymorpha HOM05D002586 ORTHO05D007521 6.2e-19 98.6 121 45.5
AagrBONN_evm.TU.Sc2ySwM_344.2815 Anthoceros agrestis HOM05D002586 ORTHO05D007521 4.0e-18 95.9 130 40.8
SMO141G0090 Selaginella moellendorffii HOM05D002586 ORTHO05D007521 1.9e-15 87.0 79 49.4
CBR_g154 Chara braunii HOM05D002586 ORTHO05D007521 1.5e-12 77.4 95 45.3
Cre16.g672041 Chlamydomonas reinhardtii HOM05D002586 ORTHO05D007521 1.9e-12 77.0 99 45.5
Nitab4.5_0000005g0480 Nicotiana tabacum HOM05D002586 ORTHO05D007521 5.6e-12 75.5 130 41.5
MCO08G012 Micromonas commoda HOM05D002586 ORTHO05D007521 4.0e-10 69.3 100 44.0
arahy.Tifrunner.gnm1.ann1.LVY3P8 Arachis hypogaea HOM05D002586 ORTHO05D007521 3.8e-08 62.8 116 37.1
CDE02G1138 Ceratophyllum demersum HOM05D002586 ORTHO05D007009 7.1e-07 58.5 100 38.0
SGA_v2.0_scaffold1G00550 Striga asiatica HOM05D002586 ORTHO05D007521 6.0e-06 55.5 143 30.1


User provided reference genes

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