Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 2.0e-186 655.6 329 100.0
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 1.4e-182 642.9 338 96.7
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 1.5e-168 596.3 329 91.2
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 2.0e-154 549.3 333 84.7
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 3.8e-145 518.5 330 82.1
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 1.5e-141 506.5 336 79.5
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 5.0e-137 491.5 335 77.0
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 5.0e-137 491.5 335 77.0
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 1.2e-135 486.9 335 76.7
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 2.1e-135 486.1 335 76.7
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 2.1e-135 486.1 335 76.7
BcaC02g09872 Brassica carinata HOM05D009749 ORTHO05D008033 9.5e-128 460.7 236 99.2
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 1.9e-123 446.4 342 72.8
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 4.1e-123 445.3 335 72.8
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 9.2e-123 444.1 340 73.2
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 2.7e-122 442.6 333 73.3
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 3.5e-122 442.2 333 73.0
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 1.5e-120 436.8 333 73.3
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 2.4e-118 429.5 340 71.2
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 2.9e-116 422.5 339 70.2
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 2.9e-116 422.5 339 70.2
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 5.2e-110 401.7 344 69.2
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 2.1e-106 389.8 342 67.3
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 7.2e-59 231.9 179 70.4
Thhalv10006450m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 1.9e-51 207.2 157 75.2
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 1.9e-51 207.2 325 46.2
Aa31LG10G11650 Aethionema arabicum HOM05D009749 ORTHO05D008033 1.9e-35 154.1 145 61.4
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 7.0e-14 82.4 343 27.1
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 6.0e-13 79.3 432 25.7
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 7.8e-13 79.0 260 29.6
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 8.6e-12 75.5 281 26.3
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 1.5e-11 74.7 319 26.0
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 4.3e-11 73.2 315 25.7
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 9.5e-11 72.0 395 25.8
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 1.6e-10 71.2 228 25.4
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.6e-10 71.2 264 25.8
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 2.1e-10 70.9 256 25.4
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 2.8e-10 70.5 230 24.8
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 2.8e-10 70.5 260 25.4
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 4.7e-10 69.7 273 27.8
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 8.1e-10 68.9 243 26.7
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 8.1e-10 68.9 243 26.7
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 1.1e-09 68.6 243 26.7
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 1.1e-09 68.6 236 27.1
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.3e-09 67.4 92 38.0
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 2.3e-09 67.4 92 38.0
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 3.1e-09 67.0 227 28.6
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 4.0e-09 66.6 386 23.1
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 6.8e-09 65.9 242 26.9
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 8.9e-09 65.5 182 30.2
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 1.2e-08 65.1 238 26.9
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 1.5e-08 64.7 391 25.8
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 1.5e-08 64.7 388 24.0
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 2.0e-08 64.3 230 24.3
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 2.0e-08 64.3 238 27.3
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 2.6e-08 63.9 396 24.5
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 2.6e-08 63.9 291 25.8
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 5.8e-08 62.8 375 24.5
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 7.5e-08 62.4 374 25.9
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 7.5e-08 62.4 262 26.3
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 9.9e-08 62.0 371 24.8
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.3e-07 61.6 228 25.9
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 1.7e-07 61.2 92 34.8
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 2.2e-07 60.8 92 38.0
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 2.2e-07 60.8 237 25.7
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 2.9e-07 60.5 92 37.0
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 2.9e-07 60.5 233 26.2
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 2.9e-07 60.5 277 26.7
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 4.9e-07 59.7 380 23.9
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 8.3e-07 58.9 259 25.9
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.1e-06 58.5 249 25.3
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 1.1e-06 58.5 247 25.9
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 1.4e-06 58.2 243 25.5
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 5.4e-06 56.2 234 22.2
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 5.4e-06 56.2 234 23.9
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 5.4e-06 56.2 60 45.0


User provided reference genes

Program Settings