Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p35350 Brassica napus HOM05D005891 ORTHO05D032421 4.0e-119 431.4 212 100.0
BolC4t25089H Brassica oleracea HOM05D005891 ORTHO05D032421 4.0e-119 431.4 212 100.0
BcaC02g09903 Brassica carinata HOM05D005891 ORTHO05D032421 1.3e-48 197.2 94 98.9
A09p50110 Brassica napus HOM05D005891 ORTHO05D007214 6.3e-40 168.3 249 46.6
BraA09t40462Z Brassica rapa HOM05D005891 ORTHO05D007214 6.3e-40 168.3 249 46.6
AL5G38660 Arabidopsis lyrata HOM05D005891 ORTHO05D007214 1.1e-39 167.5 248 47.6
BcaC07g40068 Brassica carinata HOM05D005891 ORTHO05D007214 1.4e-39 167.2 249 45.4
AT3G57170 Arabidopsis thaliana HOM05D005891 ORTHO05D007214 1.2e-38 164.1 255 45.1
CARHR119890 Cardamine hirsuta HOM05D005891 ORTHO05D007214 1.6e-38 163.7 255 45.1
Thhalv10005871m.g Eutrema salsugineum HOM05D005891 ORTHO05D007214 1.6e-38 163.7 253 46.2
BolC8t50864H Brassica oleracea HOM05D005891 ORTHO05D007214 5.9e-38 161.8 254 45.7
BcaC07g40040 Brassica carinata HOM05D005891 ORTHO05D007214 2.2e-37 159.8 253 45.1
C08p32480 Brassica napus HOM05D005891 ORTHO05D007214 2.2e-37 159.8 253 45.1
Sp5g05400 Schrenkiella parvula HOM05D005891 ORTHO05D007214 3.8e-37 159.1 248 46.0
Carub.0005s2399 Capsella rubella HOM05D005891 ORTHO05D007214 1.5e-36 157.1 257 44.0
Aa31LG10G12080 Aethionema arabicum HOM05D005891 ORTHO05D007214 3.7e-32 142.5 248 41.9
THA.LOC104824423 Tarenaya hassleriana HOM05D005891 ORTHO05D007214 2.7e-27 126.3 243 39.9
Lj5A499T12 Lonicera japonica HOM05D005891 ORTHO05D007214 5.7e-25 118.6 276 33.3
CANSAT80G2523 Cannabis sativa HOM05D005891 ORTHO05D007214 1.3e-24 117.5 212 37.7
CANSAT80G2643 Cannabis sativa HOM05D005891 ORTHO05D007214 1.3e-24 117.5 241 33.6
Dinv14832 Davidia involucrata HOM05D005891 ORTHO05D007214 2.8e-24 116.3 248 35.5
Thecc.04G215900 Theobroma cacao HOM05D005891 ORTHO05D007214 1.4e-23 114.0 247 34.8
RcHm_v2.0_Chr2g0124601 Rosa chinensis HOM05D005891 ORTHO05D007214 7.0e-23 111.7 229 36.2
FAN02G2450 Fragaria x ananassa HOM05D005891 ORTHO05D007214 9.1e-23 111.3 229 34.1
MD14G1081800 Malus domestica HOM05D005891 ORTHO05D007214 1.6e-22 110.5 229 31.9
Potri.006G044500 Populus trichocarpa HOM05D005891 ORTHO05D007214 1.6e-22 110.5 253 34.8
COL.COLO4_20863 Corchorus olitorius HOM05D005891 ORTHO05D007214 2.0e-22 110.2 251 33.9
Prupe.4G274500 Prunus persica HOM05D005891 ORTHO05D007214 2.0e-22 110.2 212 34.4
FAN05G1661 Fragaria x ananassa HOM05D005891 ORTHO05D007214 2.7e-22 109.8 229 33.6
CiPaw.09G043200 Carya illinoinensis HOM05D005891 ORTHO05D007214 3.5e-22 109.4 248 34.7
vmacro21952 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 3.5e-22 109.4 247 33.6
Haze_19761 Corylus avellana HOM05D005891 ORTHO05D007214 4.5e-22 109.0 241 32.4
FAN14G5310 Fragaria x ananassa HOM05D005891 ORTHO05D007214 5.9e-22 108.6 229 34.1
Actinidia39186 Actinidia chinensis HOM05D005891 ORTHO05D007214 7.7e-22 108.2 252 31.7
FvH4_6g24900 Fragaria vesca HOM05D005891 ORTHO05D007214 7.7e-22 108.2 229 34.1
Rhsim03G0031400 Rhododendron simsii HOM05D005891 ORTHO05D007214 7.7e-22 108.2 256 30.9
Sabra06G0030700 Salix brachista HOM05D005891 ORTHO05D007214 7.7e-22 108.2 253 32.8
MD12G1089200 Malus domestica HOM05D005891 ORTHO05D007214 1.3e-21 107.5 229 31.4
Manes.09G010000 Manihot esculenta HOM05D005891 ORTHO05D007214 1.7e-21 107.1 248 34.3
Ciclev10025261m.g Citrus clementina HOM05D005891 ORTHO05D007214 2.2e-21 106.7 259 31.7
Gohir.D09G195600 Gossypium hirsutum HOM05D005891 ORTHO05D007214 2.2e-21 106.7 251 33.1
Gorai.006G219000 Gossypium raimondii HOM05D005891 ORTHO05D007214 2.2e-21 106.7 251 33.1
Cfa016743 Carpinus fangiana HOM05D005891 ORTHO05D007214 2.9e-21 106.3 248 32.7
Gohir.A09G201700 Gossypium hirsutum HOM05D005891 ORTHO05D007214 3.2e-20 102.8 251 32.3
Nn2g15043 Nelumbo nucifera HOM05D005891 ORTHO05D007214 4.2e-20 102.4 242 31.0
TAR633G2073 Trochodendron aralioides HOM05D005891 ORTHO05D007214 7.2e-20 101.7 246 31.3
Ah.13g076700 Amaranthus hybridus HOM05D005891 ORTHO05D007214 9.4e-20 101.3 246 32.1
Ciclev10031083m.g Citrus clementina HOM05D005891 ORTHO05D007214 9.4e-20 101.3 255 30.6
Duzib212G0478 Durio zibethinus HOM05D005891 ORTHO05D007214 9.4e-20 101.3 250 31.6
MD07G1151600 Malus domestica HOM05D005891 ORTHO05D007214 9.4e-20 101.3 236 30.1
QL07p004892 Quercus lobata HOM05D005891 ORTHO05D007214 9.4e-20 101.3 248 33.1
GSVIVG01033562001 Vitis vinifera HOM05D005891 ORTHO05D007214 4.7e-19 99.0 252 33.7
TPR.G32752 Trifolium pratense HOM05D005891 ORTHO05D007214 1.4e-18 97.4 257 29.6
Phvul.001G127800 Phaseolus vulgaris HOM05D005891 ORTHO05D007214 1.8e-18 97.1 253 30.0
Sc19g0008430 Simmondsia chinensis HOM05D005891 ORTHO05D007214 1.8e-18 97.1 248 31.0
Psat3g075960 Pisum sativum HOM05D005891 ORTHO05D007214 2.3e-18 96.7 253 31.6
TWI53G1500 Tripterygium wilfordii HOM05D005891 ORTHO05D007214 2.3e-18 96.7 248 29.8
ClCG04G004100 Citrullus lanatus HOM05D005891 ORTHO05D007214 5.2e-18 95.5 247 32.0
Hund19119 Selenicereus undatus HOM05D005891 ORTHO05D007214 5.2e-18 95.5 248 32.3
CsaV3_4G022060 Cucumis sativus L. HOM05D005891 ORTHO05D007214 6.8e-18 95.1 247 32.0
Hma1.2p1_0275F.1_g110840 Hydrangea macrophylla HOM05D005891 ORTHO05D007214 6.8e-18 95.1 256 30.1
PGR031G3404 Punica granatum HOM05D005891 ORTHO05D007214 6.8e-18 95.1 209 32.1
Medtr7g090600 Medicago truncatula HOM05D005891 ORTHO05D007214 8.8e-18 94.7 257 30.0
EL10Ac3g07174 Beta vulgaris HOM05D005891 ORTHO05D007214 3.4e-17 92.8 246 31.7
Lj1g0021626 Lotus japonicus HOM05D005891 ORTHO05D007214 4.4e-17 92.4 251 29.1
Glyma.03G131800 Glycine max HOM05D005891 ORTHO05D007214 5.7e-17 92.0 258 29.8
Eucgr.A02290 Eucalyptus grandis HOM05D005891 ORTHO05D007214 1.7e-16 90.5 231 31.6
Glyma.18G212600 Glycine max HOM05D005891 ORTHO05D007214 1.7e-16 90.5 258 29.5
Aqoxy7G02967 Aquilegia oxysepala HOM05D005891 ORTHO05D007214 2.8e-16 89.7 248 29.4
AUR62026144 Chenopodium quinoa HOM05D005891 ORTHO05D007214 3.7e-16 89.4 247 30.8
DCAR_002883 Daucus carota HOM05D005891 ORTHO05D007214 4.9e-16 89.0 257 31.9
ATR0580G208 Amborella trichopoda HOM05D005891 ORTHO05D007214 8.3e-16 88.2 255 26.7
Ca_08420_v3 Cicer arietinum L. HOM05D005891 ORTHO05D007214 8.3e-16 88.2 258 28.7
Migut.K00113 Erythranthe guttata HOM05D005891 ORTHO05D007214 1.1e-15 87.8 246 30.5
SGA_v2.0_scaffold94G28504 Striga asiatica HOM05D005891 ORTHO05D007214 1.4e-15 87.4 176 32.4
AUR62030390 Chenopodium quinoa HOM05D005891 ORTHO05D007214 1.8e-15 87.0 245 29.8
MELO3C014212.2 Cucumis melo HOM05D005891 ORTHO05D007214 1.8e-15 87.0 247 30.8
Lalb_Chr20g0110281 Lupinus albus HOM05D005891 ORTHO05D007214 1.8e-15 87.0 248 29.0
Oeu015292.1 Olea europaea HOM05D005891 ORTHO05D007214 4.1e-15 85.9 248 29.0
MBI16_g31793_MAGBIO Magnolia biondii HOM05D005891 ORTHO05D007214 5.4e-15 85.5 256 28.5
Atru.chr11.2650 Acer truncatum HOM05D005891 ORTHO05D007214 7.0e-15 85.1 273 28.6
Cc06_g18470 Coffea canephora HOM05D005891 ORTHO05D007214 7.0e-15 85.1 272 27.9
Peaxi162Scf00130g01129 Petunia axillaris HOM05D005891 ORTHO05D007214 7.0e-15 85.1 155 32.9
Nitab4.5_0008674g0030 Nicotiana tabacum HOM05D005891 ORTHO05D007214 9.2e-15 84.7 200 31.5
Nn7g36464 Nelumbo nucifera HOM05D005891 ORTHO05D007214 2.7e-14 83.2 242 28.9
Nitab4.5_0001618g0090 Nicotiana tabacum HOM05D005891 ORTHO05D007214 4.5e-14 82.4 199 31.7
PSO170G1429 Papaver somniferum HOM05D005891 ORTHO05D007214 5.9e-14 82.0 258 27.5
PSO063G0854 Papaver somniferum HOM05D005891 ORTHO05D007214 7.7e-14 81.6 258 27.1
arahy.Tifrunner.gnm1.ann1.68N1MV Arachis hypogaea HOM05D005891 ORTHO05D007214 1.0e-13 81.3 311 24.4
Sopen04g008780 Solanum pennellii HOM05D005891 ORTHO05D007214 1.3e-13 80.9 210 29.5
Sed0000553 Sechium edule HOM05D005891 ORTHO05D007214 1.7e-13 80.5 229 29.3
PGSC0003DMG402007625 Solanum tuberosum HOM05D005891 ORTHO05D007214 1.7e-13 80.5 237 27.8
Solyc04g017700.4 Solanum lycopersicum HOM05D005891 ORTHO05D007214 2.9e-13 79.7 237 28.3
CAN.G1237.25 Capsicum annuum HOM05D005891 ORTHO05D007214 5.0e-13 79.0 229 28.4
Prupe.5G000500 Prunus persica HOM05D005891 ORTHO05D007214 1.1e-12 77.8 65 55.4
Zm00001eb364590 Zea mays HOM05D005891 ORTHO05D007214 1.1e-12 77.8 249 25.3
SEGI_09087 Sequoiadendron giganteum HOM05D005891 ORTHO05D007214 5.6e-12 75.5 105 41.9
arahy.Tifrunner.gnm1.ann1.324ZN3 Arachis hypogaea HOM05D005891 ORTHO05D007214 7.3e-12 75.1 317 24.3
HPP92_010949 Vanilla planifolia HOM05D005891 ORTHO05D007214 1.8e-10 70.5 230 24.8
vmacro20338 Vaccinium macrocarpon HOM05D005891 ORTHO05D007214 2.3e-10 70.1 171 32.2
Actinidia09292 Actinidia chinensis HOM05D005891 ORTHO05D007214 4.0e-10 69.3 72 44.4
CDE08G1332 Ceratophyllum demersum HOM05D005891 ORTHO05D007214 8.9e-10 68.2 243 27.2
VMungo1383G0485 Vigna mungo HOM05D005891 ORTHO05D007214 2.0e-09 67.0 99 39.4
SalBow1G2481 Salvia bowleyana HOM05D005891 ORTHO05D007214 4.4e-09 65.9 221 29.4
SalBow4G2335 Salvia bowleyana HOM05D005891 ORTHO05D007214 5.7e-09 65.5 216 27.3
Cpa.g.sc66.74 Carica papaya HOM05D005891 ORTHO05D007214 7.5e-09 65.1 74 44.6
Duzib151G0628 Durio zibethinus HOM05D005891 ORTHO05D007214 1.7e-08 63.9 189 29.6
Pp3c24_1230 Physcomitrium patens HOM05D005891 ORTHO05D007214 2.2e-08 63.5 71 39.4
Mapoly0019s0088 Marchantia polymorpha HOM05D005891 ORTHO05D007214 4.9e-08 62.4 70 38.6
HanXRQChr17g0536551 Helianthus annuus HOM05D005891 ORTHO05D007214 1.4e-07 60.8 248 27.4
ECA246G3700 Erigeron canadensis HOM05D005891 ORTHO05D007214 2.4e-07 60.1 228 27.6
Lsat_1_v5_gn_3_23040 Lactuca sativa HOM05D005891 ORTHO05D007214 2.4e-07 60.1 248 27.8
VMungo1383G2003 Vigna mungo HOM05D005891 ORTHO05D007214 2.4e-07 60.1 116 32.8
SMO367G0314 Selaginella moellendorffii HOM05D005891 ORTHO05D007214 3.2e-07 59.7 102 35.3
unitig_748.g7229 Utricularia gibba HOM05D005891 ORTHO05D007214 5.9e-06 55.5 83 38.6


User provided reference genes

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