Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p34930 Brassica napus HOM05D007112 ORTHO05D008930 1.8e-57 225.7 112 100.0
BolC4t25047H Brassica oleracea HOM05D007112 ORTHO05D027530 3.0e-49 198.4 126 82.5
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 1.9e-35 152.5 121 67.8
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 9.4e-35 150.2 121 67.8
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 2.7e-34 148.7 123 65.9
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 1.3e-31 139.8 122 63.9
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 6.3e-31 137.5 123 62.6
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 4.5e-29 131.3 106 66.0
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 7.7e-29 130.6 121 62.8
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 1.8e-25 119.4 105 61.9
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 1.7e-23 112.8 106 59.4
BcaC06g35868 Brassica carinata HOM05D000032 ORTHO05D027530 2.2e-23 112.5 69 84.1
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 3.1e-22 108.6 109 56.0
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 7.0e-22 107.5 105 55.2
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.7e-20 102.8 107 57.9
BolC7t41477H Brassica oleracea HOM05D000032 ORTHO05D027530 5.2e-17 91.3 50 88.0
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 1.6e-13 79.7 107 42.1
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 1.0e-12 77.0 109 40.4
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 2.2e-12 75.9 108 43.5
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 2.9e-12 75.5 104 41.3
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 3.8e-12 75.1 108 40.7
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 9.4e-11 70.5 102 41.2
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 1.2e-10 70.1 103 42.7
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 2.1e-10 69.3 103 42.7
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 3.6e-10 68.6 113 39.8
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 4.7e-10 68.2 111 37.8
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 6.1e-10 67.8 105 41.0
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 8.0e-10 67.4 117 38.5
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 8.0e-10 67.4 109 38.5
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 1.0e-09 67.0 110 36.4
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 1.4e-09 66.6 107 37.4
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 1.4e-09 66.6 109 36.7
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 2.3e-09 65.9 109 38.5
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 6.8e-09 64.3 112 37.5
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 6.8e-09 64.3 107 36.4
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 1.2e-08 63.5 109 37.6
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 1.2e-08 63.5 106 37.7
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 1.5e-08 63.2 107 36.4
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 1.5e-08 63.2 108 37.0
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 1.5e-08 63.2 108 34.3
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 2.0e-08 62.8 108 37.0
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 2.0e-08 62.8 108 37.0
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 2.6e-08 62.4 108 37.0
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 2.6e-08 62.4 105 39.0
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 3.4e-08 62.0 110 35.5
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 5.7e-08 61.2 109 37.6
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 5.7e-08 61.2 105 35.2
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 9.8e-08 60.5 110 36.4
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 9.8e-08 60.5 114 36.0
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 1.3e-07 60.1 94 40.4
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 1.3e-07 60.1 107 36.4
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 1.7e-07 59.7 106 34.9
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 1.7e-07 59.7 108 38.0
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 2.2e-07 59.3 110 38.2
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 2.8e-07 58.9 107 37.4
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 2.8e-07 58.9 107 34.6
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 3.7e-07 58.5 105 37.1
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 4.8e-07 58.2 105 32.4
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 4.8e-07 58.2 105 35.2
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 4.8e-07 58.2 107 36.4
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 6.3e-07 57.8 104 34.6
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 1.1e-06 57.0 108 36.1
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 2.4e-06 55.8 121 31.4
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 2.4e-06 55.8 108 35.2
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 3.1e-06 55.5 106 36.8
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 3.1e-06 55.5 107 32.7
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 4.1e-06 55.1 110 33.6
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 5.4e-06 54.7 106 34.0
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 5.4e-06 54.7 107 34.6
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 9.1e-06 53.9 108 33.3


User provided reference genes

Program Settings