Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p34640 Brassica napus HOM05D030396 ORTHO05D100042 5.0e-41 170.6 83 100.0
BcaC02g09959 Brassica carinata HOM05D030396 ORTHO05D013234 4.2e-24 114.4 55 100.0
C04p34690 Brassica napus HOM05D000031 ORTHO05D001033 5.2e-14 80.9 115 41.7
BolC4t25022H Brassica oleracea HOM05D000031 ORTHO05D001033 5.2e-14 80.9 115 41.7
C08p33360 Brassica napus HOM05D000031 ORTHO05D001033 2.2e-12 75.5 94 48.9
BcaC07g40339 Brassica carinata HOM05D000031 ORTHO05D001033 4.8e-12 74.3 115 43.5
A09p50670 Brassica napus HOM05D000031 ORTHO05D001033 4.8e-12 74.3 115 43.5
BcaC02g09960 Brassica carinata HOM05D000031 ORTHO05D001033 6.3e-12 73.9 104 45.2
A04p02960 Brassica napus HOM05D000031 ORTHO05D001033 5.4e-11 70.9 114 41.2
BraA04t16019Z Brassica rapa HOM05D000031 ORTHO05D001033 5.4e-11 70.9 114 41.2
BcaB02g07574 Brassica carinata HOM05D000031 ORTHO05D001033 1.2e-10 69.7 100 46.0
BcaB02g08295 Brassica carinata HOM05D000031 ORTHO05D001033 2.0e-10 68.9 116 41.4
BcaC01g06306 Brassica carinata HOM05D000031 ORTHO05D001033 3.5e-10 68.2 114 39.5
A04p02920 Brassica napus HOM05D000031 ORTHO05D001033 3.5e-10 68.2 115 40.9
BolC3t14128H Brassica oleracea HOM05D000031 ORTHO05D001033 3.5e-10 68.2 114 39.5
BcaC07g40152 Brassica carinata HOM05D000031 ORTHO05D001033 4.5e-10 67.8 114 36.8
C04p34700 Brassica napus HOM05D000031 ORTHO05D041586 4.5e-10 67.8 115 40.9
BolC4t25023H Brassica oleracea HOM05D000031 ORTHO05D041586 4.5e-10 67.8 115 40.9
BcaC07g40155 Brassica carinata HOM05D000031 ORTHO05D001033 1.7e-09 65.9 115 40.9
AL5G39380 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 2.2e-09 65.5 114 36.0
A03p14650 Brassica napus HOM05D000031 ORTHO05D001033 2.9e-09 65.1 115 37.4
BraA03t10756Z Brassica rapa HOM05D000031 ORTHO05D001033 2.9e-09 65.1 115 37.4
BcaC08g44865 Brassica carinata HOM05D000031 ORTHO05D001033 8.5e-09 63.5 116 40.5
C06p24790 Brassica napus HOM05D000031 ORTHO05D001033 8.5e-09 63.5 116 40.5
BolC6t37631H Brassica oleracea HOM05D000031 ORTHO05D001033 8.5e-09 63.5 116 40.5
CARHR168010 Cardamine hirsuta HOM05D000031 ORTHO05D001033 1.1e-08 63.2 114 36.8
BcaB02g07575 Brassica carinata HOM05D000031 ORTHO05D001033 2.5e-08 62.0 116 40.5
BolC8t50934H Brassica oleracea HOM05D000031 ORTHO05D001033 2.5e-08 62.0 114 37.7
A04p02930 Brassica napus HOM05D000031 ORTHO05D021793 3.2e-08 61.6 37 83.8
Thhalv10006481m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 3.2e-08 61.6 114 37.7
BcaB01g02436 Brassica carinata HOM05D000031 ORTHO05D001033 4.2e-08 61.2 115 37.4
BolC4t25026H Brassica oleracea HOM05D000031 ORTHO05D042498 7.2e-08 60.5 109 37.6
Thhalv10006091m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 9.4e-08 60.1 106 37.7
Thhalv10006099m.g Eutrema salsugineum HOM05D000031 ORTHO05D001033 1.2e-07 59.7 105 38.1
A05p16590 Brassica napus HOM05D000031 ORTHO05D001033 2.1e-07 58.9 37 81.1
A09p50620 Brassica napus HOM05D000031 ORTHO05D001033 2.1e-07 58.9 108 36.1
BraA04t16016Z Brassica rapa HOM05D000031 ORTHO05D001033 3.6e-07 58.2 108 40.7
BcaB02g08296 Brassica carinata HOM05D000031 ORTHO05D021793 4.7e-07 57.8 37 78.4
BcaC07g40151 Brassica carinata HOM05D000031 ORTHO05D001033 4.7e-07 57.8 113 37.2
AT3G57730 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 6.1e-07 57.4 121 34.7
BolC4t25020H Brassica oleracea HOM05D000031 ORTHO05D001033 8.0e-07 57.0 111 36.9
A09p50600 Brassica napus HOM05D000031 ORTHO05D001033 1.0e-06 56.6 112 33.0
Aa31LG10G12500 Aethionema arabicum HOM05D000031 ORTHO05D001033 1.4e-06 56.2 114 34.2
C03p17140 Brassica napus HOM05D000031 ORTHO05D001033 1.4e-06 56.2 111 36.9
Aa31LG10G12460 Aethionema arabicum HOM05D000031 ORTHO05D001033 1.8e-06 55.8 114 36.0
Aa31sc1360G30 Aethionema arabicum HOM05D000031 ORTHO05D001033 1.8e-06 55.8 114 36.0
AL5G39360 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 1.8e-06 55.8 113 37.2
AL4G40690 Arabidopsis lyrata HOM05D000031 ORTHO05D001033 2.3e-06 55.5 108 36.1
BcaB02g07582 Brassica carinata HOM05D000031 ORTHO05D021793 2.3e-06 55.5 36 77.8
BcaC07g40154 Brassica carinata HOM05D000031 ORTHO05D001033 3.0e-06 55.1 58 53.4
BraA09t40510Z Brassica rapa HOM05D000031 ORTHO05D001033 4.0e-06 54.7 117 31.6
AT3G57710 Arabidopsis thaliana HOM05D000031 ORTHO05D001033 5.2e-06 54.3 116 34.5
BcaC01g04726 Brassica carinata HOM05D000031 ORTHO05D001033 5.2e-06 54.3 117 33.3
C03p34430 Brassica napus HOM05D000031 ORTHO05D001033 5.2e-06 54.3 117 33.3
C04p34650 Brassica napus HOM05D000031 ORTHO05D001033 5.2e-06 54.3 112 36.6
BolC3t15752H Brassica oleracea HOM05D000031 ORTHO05D001033 5.2e-06 54.3 117 33.3
Carub.0005s2455 Capsella rubella HOM05D000031 ORTHO05D001033 6.8e-06 53.9 116 31.9
BcaB01g02797 Brassica carinata HOM05D000031 ORTHO05D001033 8.8e-06 53.5 117 32.5


User provided reference genes

Program Settings