Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p34090 Brassica napus HOM05D000279 ORTHO05D000498 8.7e-54 213.4 108 100.0
BraA04t15986Z Brassica rapa HOM05D000279 ORTHO05D000498 5.6e-45 184.1 101 92.1
A04p02610 Brassica napus HOM05D000279 ORTHO05D000498 1.3e-44 183.0 101 92.1
BraA04t15987Z Brassica rapa HOM05D000279 ORTHO05D000498 1.8e-43 179.1 99 91.9
BolC4t24972H Brassica oleracea HOM05D000279 ORTHO05D000498 3.5e-39 164.9 88 96.6
BcaC02g10003 Brassica carinata HOM05D000279 ORTHO05D000498 1.7e-28 129.4 68 95.6
AL5G39980 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.8e-17 91.7 120 47.5
AL5G23200 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 6.5e-17 90.9 107 44.9
AT3G58270 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 5.5e-16 87.8 135 41.5
BcaC07g40193 Brassica carinata HOM05D000279 ORTHO05D000498 6.1e-15 84.3 99 46.5
CARHR168640 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.8e-14 82.8 115 44.3
AL5G23140 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.9e-14 81.6 106 43.4
Thhalv10006467m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 3.9e-14 81.6 118 41.5
BcaC07g40260 Brassica carinata HOM05D000279 ORTHO05D000498 5.2e-14 81.3 99 44.4
BolC8t50979H Brassica oleracea HOM05D000279 ORTHO05D000498 5.2e-14 81.3 99 44.4
Aa31LG10G12940 Aethionema arabicum HOM05D000279 ORTHO05D000498 1.1e-13 80.1 100 45.0
Carub.0005s2516 Capsella rubella HOM05D000279 ORTHO05D000498 2.0e-13 79.3 114 42.1
AT1G31390 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 2.6e-13 79.0 99 48.5
C08p33810 Brassica napus HOM05D000279 ORTHO05D000498 2.6e-13 79.0 99 43.4
AT3G44790 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 4.4e-13 78.2 93 47.3
A09p50970 Brassica napus HOM05D000279 ORTHO05D000498 9.7e-13 77.0 99 44.4
AT1G31370 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.3e-12 76.6 96 49.0
C04p34030 Brassica napus HOM05D000279 ORTHO05D000498 1.3e-12 76.6 98 52.0
Carub.0005s1052 Capsella rubella HOM05D000279 ORTHO05D000498 1.3e-12 76.6 108 44.4
BolC6t37685H Brassica oleracea HOM05D000279 ORTHO05D000498 1.7e-12 76.3 109 44.0
Carub.0005s2508 Capsella rubella HOM05D000279 ORTHO05D000498 1.7e-12 76.3 115 42.6
BolC6t37687H Brassica oleracea HOM05D000279 ORTHO05D000498 2.2e-12 75.9 103 42.7
BraA09t40544Z Brassica rapa HOM05D000279 ORTHO05D000498 2.8e-12 75.5 81 51.9
AL1G66560 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.7e-12 75.1 105 45.7
AT3G58210 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 3.7e-12 75.1 121 37.2
Aa31LG10G12950 Aethionema arabicum HOM05D000279 ORTHO05D000498 4.8e-12 74.7 100 40.0
AT3G58370 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 4.8e-12 74.7 99 42.4
AL5G40100 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 8.2e-12 73.9 99 41.4
C04p34010 Brassica napus HOM05D000279 ORTHO05D000498 8.2e-12 73.9 105 44.8
BolC4t24968H Brassica oleracea HOM05D000279 ORTHO05D000498 8.2e-12 73.9 105 44.8
A09p50990 Brassica napus HOM05D000279 ORTHO05D000498 1.1e-11 73.6 99 42.4
AT3G44800 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.8e-11 72.8 114 39.5
AL5G40110 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.1e-11 72.0 100 43.0
AL5G40170 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.1e-11 72.0 116 38.8
AT3G58350 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 3.1e-11 72.0 99 42.4
BcaC07g40195 Brassica carinata HOM05D000279 ORTHO05D000498 3.1e-11 72.0 101 41.6
Aa31LG10G9970 Aethionema arabicum HOM05D000279 ORTHO05D000498 4.1e-11 71.6 101 40.6
AL5G39940 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 4.1e-11 71.6 112 41.1
BcaB06g27543 Brassica carinata HOM05D000279 ORTHO05D000498 5.3e-11 71.2 101 45.5
AL5G23230 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 7.0e-11 70.9 113 40.7
AL5G40070 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 7.0e-11 70.9 108 40.7
AL1G49650 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 9.1e-11 70.5 99 43.4
AT3G58250 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.2e-10 70.1 101 42.6
AT3G58360 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.2e-10 70.1 100 41.0
AT1G31380 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 2.0e-10 69.3 82 52.4
AT3G58410 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 2.0e-10 69.3 100 44.0
CARHR168770 Cardamine hirsuta HOM05D000279 ORTHO05D000498 2.0e-10 69.3 100 43.0
Thhalv10006437m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 2.0e-10 69.3 78 50.0
Sp5g04457 Schrenkiella parvula HOM05D000279 ORTHO05D000498 2.0e-10 69.3 99 38.4
AL5G40000 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.5e-10 68.6 127 35.4
A07p24000 Brassica napus HOM05D000279 ORTHO05D000498 3.5e-10 68.6 100 41.0
BcaC08g44906 Brassica carinata HOM05D000279 ORTHO05D000498 4.5e-10 68.2 100 40.0
C06p25250 Brassica napus HOM05D000279 ORTHO05D000498 4.5e-10 68.2 100 40.0
BolC6t37686H Brassica oleracea HOM05D000279 ORTHO05D000498 4.5e-10 68.2 100 40.0
BcaB02g07542 Brassica carinata HOM05D000279 ORTHO05D000498 5.9e-10 67.8 100 40.0
A09p51010 Brassica napus HOM05D000279 ORTHO05D000498 5.9e-10 67.8 116 35.3
Carub.0002s0729 Capsella rubella HOM05D000279 ORTHO05D000498 5.9e-10 67.8 98 44.9
AL5G39960 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 7.7e-10 67.4 101 39.6
BraA09t40546Z Brassica rapa HOM05D000279 ORTHO05D000498 7.7e-10 67.4 116 36.2
CARHR168690 Cardamine hirsuta HOM05D000279 ORTHO05D000498 7.7e-10 67.4 99 40.4
A04p02590 Brassica napus HOM05D000279 ORTHO05D000498 1.0e-09 67.0 115 39.1
A09p50960 Brassica napus HOM05D000279 ORTHO05D000498 1.0e-09 67.0 116 36.2
Carub.0001s2982 Capsella rubella HOM05D000279 ORTHO05D000498 1.0e-09 67.0 94 47.9
BcaC07g40264 Brassica carinata HOM05D000279 ORTHO05D000498 1.3e-09 66.6 115 39.1
AL3G42880 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 1.7e-09 66.2 100 40.0
BraA09t40542Z Brassica rapa HOM05D000279 ORTHO05D000498 1.7e-09 66.2 116 36.2
BraA09t40545Z Brassica rapa HOM05D000279 ORTHO05D000498 1.7e-09 66.2 101 42.6
AT3G29580 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 2.2e-09 65.9 93 45.2
BcaB02g07540 Brassica carinata HOM05D000279 ORTHO05D000498 2.2e-09 65.9 96 38.5
BcaB03g12727 Brassica carinata HOM05D000279 ORTHO05D000498 2.2e-09 65.9 104 37.5
CARHR168580 Cardamine hirsuta HOM05D000279 ORTHO05D000498 2.2e-09 65.9 99 41.4
AL5G39910 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 2.9e-09 65.5 111 37.8
AL5G40140 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 2.9e-09 65.5 100 41.0
A09p50980 Brassica napus HOM05D000279 ORTHO05D000498 2.9e-09 65.5 102 41.2
BraA08t33796Z Brassica rapa HOM05D000279 ORTHO05D000498 2.9e-09 65.5 101 38.6
BraA08t33798Z Brassica rapa HOM05D000279 ORTHO05D000498 2.9e-09 65.5 101 38.6
Sp5g04453 Schrenkiella parvula HOM05D000279 ORTHO05D000498 2.9e-09 65.5 106 38.7
AT3G58340 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 3.8e-09 65.1 125 36.0
BcaC07g40192 Brassica carinata HOM05D000279 ORTHO05D000498 3.8e-09 65.1 115 40.0
CARHR168650 Cardamine hirsuta HOM05D000279 ORTHO05D000498 3.8e-09 65.1 108 37.0
BcaC07g40261 Brassica carinata HOM05D000279 ORTHO05D000498 5.0e-09 64.7 102 41.2
BolC9t59008H Brassica oleracea HOM05D000279 ORTHO05D000498 5.0e-09 64.7 99 37.4
CARHR168590 Cardamine hirsuta HOM05D000279 ORTHO05D000498 5.0e-09 64.7 119 34.5
BcaC08g44907 Brassica carinata HOM05D000279 ORTHO05D000498 6.5e-09 64.3 96 37.5
AL5G39970 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 1.1e-08 63.5 100 39.0
BcaC07g40191 Brassica carinata HOM05D000279 ORTHO05D000498 1.1e-08 63.5 107 43.9
Carub.0005s1051 Capsella rubella HOM05D000279 ORTHO05D000498 1.1e-08 63.5 123 31.7
Carub.0005s2517 Capsella rubella HOM05D000279 ORTHO05D000498 1.1e-08 63.5 86 45.3
CARHR030850 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.1e-08 63.5 83 49.4
AT3G58200 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.5e-08 63.2 113 38.9
BcaB02g08264 Brassica carinata HOM05D000279 ORTHO05D000498 1.5e-08 63.2 117 37.6
BraA03t14131Z Brassica rapa HOM05D000279 ORTHO05D000498 1.5e-08 63.2 87 40.2
Thhalv10011795m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.5e-08 63.2 74 48.6
A04p02620 Brassica napus HOM05D000279 ORTHO05D000498 1.9e-08 62.8 99 36.4
Sp5g04460 Schrenkiella parvula HOM05D000279 ORTHO05D000498 1.9e-08 62.8 100 37.0
BraA04t15988Z Brassica rapa HOM05D000279 ORTHO05D000498 2.5e-08 62.4 99 35.4
Carub.0005s2515 Capsella rubella HOM05D000279 ORTHO05D000498 2.5e-08 62.4 100 36.0
Thhalv10012142m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 2.5e-08 62.4 100 41.0
Aa31LG10G12930 Aethionema arabicum HOM05D000279 ORTHO05D000498 3.2e-08 62.0 99 36.4
AL5G39900 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.2e-08 62.0 90 48.9
BcaC08g44916 Brassica carinata HOM05D002442 ORTHO05D002670 3.2e-08 62.0 54 59.3
C06p25420 Brassica napus HOM05D002442 ORTHO05D002670 3.2e-08 62.0 54 59.3
BolC4t24973H Brassica oleracea HOM05D000279 ORTHO05D000498 3.2e-08 62.0 100 39.0
BcaC02g10001 Brassica carinata HOM05D000279 ORTHO05D000498 4.2e-08 61.6 100 38.0
C04p34100 Brassica napus HOM05D000279 ORTHO05D000498 4.2e-08 61.6 100 38.0
Sp5g04500 Schrenkiella parvula HOM05D000279 ORTHO05D000498 4.2e-08 61.6 98 40.8
Aa31LG10G12970 Aethionema arabicum HOM05D000279 ORTHO05D000498 5.5e-08 61.2 97 39.2
AT3G58400 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 5.5e-08 61.2 74 45.9
A07p24020 Brassica napus HOM05D000279 ORTHO05D000498 5.5e-08 61.2 96 34.4
C03p87450 Brassica napus HOM05D000279 ORTHO05D000498 5.5e-08 61.2 96 40.6
BolC3t21063H Brassica oleracea HOM05D000279 ORTHO05D000498 5.5e-08 61.2 96 40.6
Carub.0005s2506 Capsella rubella HOM05D000279 ORTHO05D000498 5.5e-08 61.2 115 40.0
CARHR259860 Cardamine hirsuta HOM05D000279 ORTHO05D000498 5.5e-08 61.2 95 38.9
AT2G05410 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 7.2e-08 60.8 79 46.8
BcaB03g12726 Brassica carinata HOM05D000279 ORTHO05D000498 7.2e-08 60.8 78 47.4
Thhalv10016883m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 7.2e-08 60.8 115 36.5
AL5G16100 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 9.4e-08 60.5 96 38.5
AT1G31400 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 9.4e-08 60.5 98 43.9
AT3G44805 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 9.4e-08 60.5 86 45.3
AT3G58260 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 9.4e-08 60.5 99 37.4
BcaC02g10002 Brassica carinata HOM05D000279 ORTHO05D000498 9.4e-08 60.5 99 36.4
BcaC07g40196 Brassica carinata HOM05D000279 ORTHO05D000498 9.4e-08 60.5 113 35.4
BcaB02g07532 Brassica carinata HOM05D000279 ORTHO05D000498 1.2e-07 60.1 100 37.0
BcaB02g07534 Brassica carinata HOM05D000279 ORTHO05D000498 1.2e-07 60.1 100 37.0
A08p18380 Brassica napus HOM05D000279 ORTHO05D000498 1.2e-07 60.1 96 40.6
Carub.0005s2510 Capsella rubella HOM05D000279 ORTHO05D000498 1.2e-07 60.1 104 33.7
CARHR168710 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.2e-07 60.1 82 43.9
Thhalv10006412m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.2e-07 60.1 101 40.6
AL3G42870 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 2.1e-07 59.3 99 34.3
AT3G27040 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 2.1e-07 59.3 96 41.7
BcaC01g01044 Brassica carinata HOM05D000279 ORTHO05D000498 2.1e-07 59.3 86 43.0
C08p33830 Brassica napus HOM05D000279 ORTHO05D000498 2.1e-07 59.3 105 37.1
AL5G16150 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 2.7e-07 58.9 96 42.7
BcaB02g08268 Brassica carinata HOM05D000279 ORTHO05D000498 2.7e-07 58.9 100 37.0
Sp1g34680 Schrenkiella parvula HOM05D000279 ORTHO05D000498 2.7e-07 58.9 102 39.2
BcaB02g07538 Brassica carinata HOM05D000279 ORTHO05D000498 3.6e-07 58.5 94 35.1
BcaB02g08267 Brassica carinata HOM05D000279 ORTHO05D000498 3.6e-07 58.5 97 35.1
BcaC08g44908 Brassica carinata HOM05D000279 ORTHO05D000498 4.7e-07 58.2 88 35.2
A03p50410 Brassica napus HOM05D000279 ORTHO05D000498 4.7e-07 58.2 92 37.0
BolC6t37688H Brassica oleracea HOM05D000279 ORTHO05D000498 4.7e-07 58.2 88 35.2
AL5G40020 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 6.1e-07 57.8 108 33.3
BcaC02g10008 Brassica carinata HOM05D000279 ORTHO05D000498 6.1e-07 57.8 82 46.3
BcaC07g40263 Brassica carinata HOM05D000279 ORTHO05D000498 6.1e-07 57.8 115 36.5
A07p24110 Brassica napus HOM05D000279 ORTHO05D000498 6.1e-07 57.8 105 34.3
Thhalv10012179m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 6.1e-07 57.8 100 40.0
Thhalv10028280m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 6.1e-07 57.8 88 38.6
Thhalv10028204m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 8.0e-07 57.4 88 38.6
CARHR151270 Cardamine hirsuta HOM05D000279 ORTHO05D000498 1.0e-06 57.0 87 40.2
BolC3t21062H Brassica oleracea HOM05D000279 ORTHO05D000498 1.4e-06 56.6 99 37.4
Thhalv10011981m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.4e-06 56.6 76 43.4
AT2G05420 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.8e-06 56.2 99 39.4
BolC4t24971H Brassica oleracea HOM05D000279 ORTHO05D000498 1.8e-06 56.2 102 37.3
Thhalv10012015m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.8e-06 56.2 100 39.0
Aa31LG2G18750 Aethionema arabicum HOM05D000279 ORTHO05D000498 2.3e-06 55.8 99 33.3
AL1G49660 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 2.3e-06 55.8 99 37.4
C06p25260 Brassica napus HOM05D000279 ORTHO05D000498 2.3e-06 55.8 98 38.8
Carub.0005s2509 Capsella rubella HOM05D000279 ORTHO05D000498 4.0e-06 55.1 112 30.4
AL5G40200 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 5.2e-06 54.7 41 56.1
Sp6g09200 Schrenkiella parvula HOM05D000279 ORTHO05D000498 5.2e-06 54.7 110 34.5
Carub.0005s2518 Capsella rubella HOM05D000279 ORTHO05D000498 6.7e-06 54.3 81 42.0
Thhalv10010958m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 6.7e-06 54.3 103 36.9
Aa31LG10G12980 Aethionema arabicum HOM05D000279 ORTHO05D000498 8.8e-06 53.9 105 35.2
AL4G40950 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 8.8e-06 53.9 80 38.8
AL5G40160 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 8.8e-06 53.9 41 58.5
AT2G01790 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 8.8e-06 53.9 103 37.9
AT2G42465 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 8.8e-06 53.9 105 34.3
AT3G58380 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 8.8e-06 53.9 76 43.4
A10p23460 Brassica napus HOM05D000279 ORTHO05D000498 8.8e-06 53.9 97 34.0


User provided reference genes

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