Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p34020 Brassica napus HOM05D014566 ORTHO05D011974 1.6e-61 239.2 115 100.0
BolC4t24969H Brassica oleracea HOM05D014566 ORTHO05D011974 1.6e-61 239.2 115 100.0
BolC8t50139H Brassica oleracea HOM05D014566 ORTHO05D011974 8.9e-57 223.4 115 94.8
C08p25190 Brassica napus HOM05D014566 ORTHO05D011974 1.0e-52 209.9 113 91.2
C01p31530 Brassica napus HOM05D000103 ORTHO05D011974 2.8e-50 201.8 147 70.7
BolC3t20500H Brassica oleracea HOM05D000103 ORTHO05D011974 2.8e-50 201.8 146 72.6
BolC1t03087H Brassica oleracea HOM05D000103 ORTHO05D011974 3.6e-50 201.4 147 70.7
C07p45100 Brassica napus HOM05D014566 ORTHO05D011974 1.2e-48 196.4 115 87.8
BolC7t45032H Brassica oleracea HOM05D014566 ORTHO05D011974 2.0e-48 195.7 115 87.0
BolC5t32822H Brassica oleracea HOM05D000103 ORTHO05D011974 7.6e-48 193.7 147 69.4
C04p51570 Brassica napus HOM05D000103 ORTHO05D011974 1.3e-44 183.0 190 55.3
C01p37240 Brassica napus HOM05D014566 ORTHO05D011974 2.5e-43 178.7 121 76.9
C03p82540 Brassica napus HOM05D000103 ORTHO05D011974 1.5e-40 169.5 89 92.1
BolC2t07373H Brassica oleracea HOM05D000103 ORTHO05D011974 6.4e-39 164.1 129 67.4
BolC4t28123H Brassica oleracea HOM05D000103 ORTHO05D011974 6.0e-37 157.5 127 67.7
BolC1t03694H Brassica oleracea HOM05D014566 ORTHO05D011974 5.5e-30 134.4 99 72.7
C02p12760 Brassica napus HOM05D000103 ORTHO05D011974 4.5e-24 114.8 105 61.0
C05p40770 Brassica napus HOM05D000103 ORTHO05D011974 1.7e-23 112.8 103 60.2
BolC5t31835H Brassica oleracea HOM05D000103 ORTHO05D011974 1.9e-14 82.8 83 59.0
AT1G66950 Arabidopsis thaliana HOM05D000103 ORTHO05D000049 5.3e-09 64.7 141 36.9
BcaC02g07602 Brassica carinata HOM05D000103 ORTHO05D000049 5.3e-09 64.7 141 36.9
Carub.0002s1323 Capsella rubella HOM05D000103 ORTHO05D000049 5.3e-09 64.7 141 36.2
A04p27900 Brassica napus HOM05D000103 ORTHO05D000049 6.9e-09 64.3 131 38.9
BolC4t28020H Brassica oleracea HOM05D000103 ORTHO05D000049 6.9e-09 64.3 131 38.9
BraA04t18281Z Brassica rapa HOM05D000103 ORTHO05D000049 6.9e-09 64.3 131 38.9
AL4G32540 Arabidopsis lyrata HOM05D000103 ORTHO05D000049 9.1e-09 63.9 131 38.9
BcaC01g05662 Brassica carinata HOM05D000103 ORTHO05D000049 9.1e-09 63.9 131 38.2
C03p23530 Brassica napus HOM05D000103 ORTHO05D000049 9.1e-09 63.9 131 38.2
BolC3t14749H Brassica oleracea HOM05D000103 ORTHO05D000049 9.1e-09 63.9 131 38.2
AT2G36380 Arabidopsis thaliana HOM05D000103 ORTHO05D000049 1.2e-08 63.5 141 36.9
BcaB01g03842 Brassica carinata HOM05D000103 ORTHO05D000049 1.5e-08 63.2 132 37.1
BcaB01g03843 Brassica carinata HOM05D000103 ORTHO05D000049 1.5e-08 63.2 132 37.1
BcaB06g28935 Brassica carinata HOM05D000103 ORTHO05D000049 2.0e-08 62.8 141 36.2
Sp4g18670 Schrenkiella parvula HOM05D000103 ORTHO05D000049 2.6e-08 62.4 131 36.6
CARHR130680 Cardamine hirsuta HOM05D000103 ORTHO05D000049 3.4e-08 62.0 141 36.2
Rhsim11G0101300 Rhododendron simsii HOM05D000103 ORTHO05D000049 4.5e-08 61.6 103 37.9
AUR62004594 Chenopodium quinoa HOM05D000103 ORTHO05D000049 5.9e-08 61.2 113 35.4
Sp4g17010 Schrenkiella parvula HOM05D000103 ORTHO05D000049 5.9e-08 61.2 131 36.6
AL2G25230 Arabidopsis lyrata HOM05D000103 ORTHO05D000049 7.7e-08 60.8 141 36.2
A03p20100 Brassica napus HOM05D000103 ORTHO05D000049 7.7e-08 60.8 131 37.4
BraA03t11260Z Brassica rapa HOM05D000103 ORTHO05D000049 7.7e-08 60.8 131 37.4
Thhalv10016140m.g Eutrema salsugineum HOM05D000103 ORTHO05D000049 7.7e-08 60.8 131 37.4
Lj7A639G47 Lonicera japonica HOM05D000103 ORTHO05D000049 1.7e-07 59.7 103 39.8
MELO3C011435.2 Cucumis melo HOM05D000103 ORTHO05D000049 2.9e-07 58.9 107 37.4
Sc02g0001060 Simmondsia chinensis HOM05D000103 ORTHO05D000049 2.9e-07 58.9 96 37.5
Hund27713 Selenicereus undatus HOM05D000103 ORTHO05D000049 3.8e-07 58.5 103 36.9
Hund27717 Selenicereus undatus HOM05D000103 ORTHO05D000049 3.8e-07 58.5 103 36.9
arahy.Tifrunner.gnm1.ann1.XJL156 Arachis hypogaea HOM05D000103 ORTHO05D000049 5.0e-07 58.2 103 35.9
Ciclev10024468m.g Citrus clementina HOM05D000103 ORTHO05D000049 6.5e-07 57.8 105 36.2
MELO3C012998.2 Cucumis melo HOM05D000103 ORTHO05D000049 8.5e-07 57.4 103 35.0
SalBow4G1369 Salvia bowleyana HOM05D000103 ORTHO05D000049 8.5e-07 57.4 113 33.6
SalBow4G1785 Salvia bowleyana HOM05D000103 ORTHO05D000049 8.5e-07 57.4 113 33.6
MBI01_g37336_MAGBIO Magnolia biondii HOM05D000103 ORTHO05D000049 1.1e-06 57.0 113 33.6
ECA232G3756 Erigeron canadensis HOM05D000103 ORTHO05D000049 1.4e-06 56.6 103 36.9
Lsat_1_v5_gn_1_119121 Lactuca sativa HOM05D000103 ORTHO05D000049 1.9e-06 56.2 112 34.8
Rhsim11G0102600 Rhododendron simsii HOM05D000103 ORTHO05D000049 1.9e-06 56.2 103 35.9
arahy.Tifrunner.gnm1.ann1.69QNC3 Arachis hypogaea HOM05D000103 ORTHO05D000049 2.5e-06 55.8 103 35.0
BcaC03g14035 Brassica carinata HOM05D000860 ORTHO05D011974 2.5e-06 55.8 35 74.3
SEGI_40764 Sequoiadendron giganteum HOM05D000103 ORTHO05D000049 2.5e-06 55.8 124 34.7
Sopen11g003190 Solanum pennellii HOM05D000103 ORTHO05D000049 2.5e-06 55.8 103 36.9
Rhsim11G0102000 Rhododendron simsii HOM05D000103 ORTHO05D000049 3.2e-06 55.5 103 36.9
Cc07_g18420 Coffea canephora HOM05D000103 ORTHO05D000049 4.2e-06 55.1 113 34.5
Carub.0004s1818 Capsella rubella HOM05D000103 ORTHO05D000049 5.5e-06 54.7 141 34.0
Ciclev10024714m.g Citrus clementina HOM05D000103 ORTHO05D000049 5.5e-06 54.7 103 35.9
Eucgr.H02564 Eucalyptus grandis HOM05D000103 ORTHO05D000049 5.5e-06 54.7 103 35.9
Thhalv10015877m.g Eutrema salsugineum HOM05D000860 ORTHO05D003230 5.5e-06 54.7 35 74.3
BcaB05g21916 Brassica carinata HOM05D000860 ORTHO05D003230 7.2e-06 54.3 35 71.4
BcaC03g13085 Brassica carinata HOM05D000860 ORTHO05D003230 7.2e-06 54.3 35 71.4
BolC2t06008H Brassica oleracea HOM05D000860 ORTHO05D003230 7.2e-06 54.3 35 71.4
BraA02t04681Z Brassica rapa HOM05D000860 ORTHO05D003230 7.2e-06 54.3 35 71.4
CARHR212070 Cardamine hirsuta HOM05D000860 ORTHO05D003230 7.2e-06 54.3 35 71.4
Manes.09G058632 Manihot esculenta HOM05D000103 ORTHO05D000049 7.2e-06 54.3 141 30.5
Nitab4.5_0003976g0050 Nicotiana tabacum HOM05D000103 ORTHO05D000049 9.4e-06 53.9 103 35.0
Rhsim02G0208400 Rhododendron simsii HOM05D000103 ORTHO05D000049 9.4e-06 53.9 97 37.1
Rhsim07G0149900 Rhododendron simsii HOM05D000103 ORTHO05D000049 9.4e-06 53.9 103 35.9


User provided reference genes

Program Settings