Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 2.1e-79 298.9 146 100.0
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 6.6e-73 277.3 133 100.0
C03p39960 Brassica napus HOM05D001316 ORTHO05D024383 5.9e-29 131.3 74 87.8
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 8.2e-23 110.9 57 89.5
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 8.2e-23 110.9 57 89.5
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 1.1e-22 110.5 57 87.7
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 1.4e-22 110.2 60 83.3
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 2.4e-22 109.4 57 89.5
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 2.4e-22 109.4 57 89.5
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 1.2e-21 107.1 57 86.0
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.5e-21 106.7 57 86.0
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 2.0e-21 106.3 57 86.0
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 7.7e-21 104.4 63 76.2
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 7.7e-21 104.4 59 79.7
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 1.7e-20 103.2 57 84.2
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 2.2e-20 102.8 57 82.5
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 3.8e-20 102.1 72 65.3
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 3.8e-20 102.1 57 80.7
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 5.0e-20 101.7 57 78.9
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 8.5e-20 100.9 63 74.6
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 8.5e-20 100.9 57 78.9
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 1.4e-19 100.1 57 82.5
BolC3t16261H Brassica oleracea HOM05D001316 ORTHO05D024383 1.4e-19 100.1 54 90.7
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 1.4e-19 100.1 63 73.0
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 1.9e-19 99.8 72 65.3
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 1.9e-19 99.8 61 70.5
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.9e-19 99.8 61 70.5
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.2e-19 99.0 57 75.4
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 3.2e-19 99.0 66 66.7
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 4.2e-19 98.6 72 62.5
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 4.2e-19 98.6 57 80.7
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 4.2e-19 98.6 72 66.7
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 5.5e-19 98.2 57 78.9
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 5.5e-19 98.2 63 68.3
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 5.5e-19 98.2 66 66.7
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 7.2e-19 97.8 59 76.3
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 7.2e-19 97.8 57 73.7
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 9.4e-19 97.4 72 62.5
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 9.4e-19 97.4 72 62.5
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 9.4e-19 97.4 61 68.9
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 9.4e-19 97.4 67 64.2
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 9.4e-19 97.4 57 77.2
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 1.2e-18 97.1 63 73.0
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.2e-18 97.1 57 77.2
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.2e-18 97.1 57 77.2
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 1.2e-18 97.1 57 77.2
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 1.2e-18 97.1 57 75.4
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.6e-18 96.7 66 66.7
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 2.1e-18 96.3 73 63.0
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 3.6e-18 95.5 59 76.3
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 4.7e-18 95.1 63 68.3
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 4.7e-18 95.1 64 70.3
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 4.7e-18 95.1 64 70.3
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 4.7e-18 95.1 72 61.1
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 4.7e-18 95.1 63 66.7
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 4.7e-18 95.1 63 71.4
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 4.7e-18 95.1 57 77.2
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 6.1e-18 94.7 57 77.2
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 6.1e-18 94.7 63 71.4
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 6.1e-18 94.7 57 71.9
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 8.0e-18 94.4 63 66.7
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 8.0e-18 94.4 57 73.7
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 1.0e-17 94.0 63 69.8
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 1.0e-17 94.0 61 70.5
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 1.0e-17 94.0 72 62.5
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.4e-17 93.6 66 65.2
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.4e-17 93.6 57 66.7
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 1.4e-17 93.6 72 59.7
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.8e-17 93.2 57 73.7
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 1.8e-17 93.2 56 76.8
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 1.8e-17 93.2 63 66.7
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.8e-17 93.2 57 73.7
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 2.3e-17 92.8 56 75.0
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 2.3e-17 92.8 57 73.7
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 2.3e-17 92.8 57 73.7
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 2.3e-17 92.8 57 73.7
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 3.0e-17 92.4 57 68.4
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 3.0e-17 92.4 56 75.0
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 3.0e-17 92.4 66 65.2
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 3.0e-17 92.4 57 73.7
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 3.0e-17 92.4 56 76.8
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 3.0e-17 92.4 72 59.7
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 3.9e-17 92.0 57 68.4
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 5.2e-17 91.7 57 71.9
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 6.7e-17 91.3 57 70.2
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 8.8e-17 90.9 63 65.1
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 8.8e-17 90.9 63 65.1
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 8.8e-17 90.9 63 68.3
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 8.8e-17 90.9 63 65.1
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.1e-16 90.5 57 71.9
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 1.5e-16 90.1 63 65.1
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 3.3e-16 89.0 57 71.9
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 4.4e-16 88.6 64 65.6
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 5.7e-16 88.2 57 70.2
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 9.7e-16 87.4 57 70.2
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 1.3e-15 87.0 63 63.5
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 1.7e-15 86.7 56 73.2
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 1.7e-15 86.7 63 63.5
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 1.7e-15 86.7 69 62.3
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 2.2e-15 86.3 57 66.7
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 2.8e-15 85.9 63 65.1
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 3.7e-15 85.5 57 68.4
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 4.8e-15 85.1 72 56.9
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 6.3e-15 84.7 59 64.4
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 8.2e-15 84.3 59 67.8
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 1.1e-14 84.0 57 66.7
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.4e-14 83.6 59 67.8
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 1.2e-13 80.5 73 53.4
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.8e-09 66.6 75 52.0
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 1.5e-08 63.5 31 96.8


User provided reference genes

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