Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 2.0e-138 495.7 251 100.0
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 4.3e-120 434.9 270 86.3
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 9.9e-109 397.1 290 74.8
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 8.6e-105 384.0 290 73.8
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 2.8e-103 379.0 290 71.7
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 4.0e-102 375.2 294 71.4
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 3.8e-100 368.6 290 71.0
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 3.8e-100 368.6 290 71.0
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 4.9e-100 368.2 294 70.7
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 6.4e-100 367.9 289 71.6
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 8.4e-100 367.5 294 69.7
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 1.2e-98 363.6 290 70.7
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 3.9e-97 358.6 294 69.7
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 3.3e-96 355.5 294 69.4
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 6.2e-95 351.3 289 68.5
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 2.4e-94 349.4 278 71.2
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 1.2e-93 347.1 294 67.7
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 5.4e-91 338.2 287 66.6
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 2.4e-83 312.8 295 62.4
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 2.6e-77 292.7 306 56.5
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 2.2e-68 263.1 305 51.8
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 2.2e-68 263.1 306 51.6
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 6.5e-68 261.5 305 51.5
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 4.2e-67 258.8 305 52.1
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 2.1e-66 256.5 307 51.5
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 1.8e-65 253.4 305 49.2
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 1.8e-65 253.4 305 49.5
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 3.0e-65 252.7 293 52.6
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 5.1e-65 251.9 329 46.5
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.5e-64 250.4 299 50.8
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 1.9e-64 250.0 305 48.9
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 2.5e-64 249.6 293 51.2
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 3.3e-64 249.2 299 51.2
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 4.3e-64 248.8 305 48.5
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 9.7e-64 247.7 300 50.3
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 1.3e-63 247.3 300 50.3
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.6e-63 246.9 305 49.8
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 4.8e-63 245.4 292 49.7
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 8.2e-63 244.6 306 47.4
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 8.2e-63 244.6 305 47.9
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.8e-62 243.4 303 48.2
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 2.4e-62 243.0 303 48.5
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 5.3e-62 241.9 294 51.0
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 5.3e-62 241.9 307 48.2
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 1.2e-61 240.7 306 47.1
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 4.5e-61 238.8 304 48.0
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 5.9e-61 238.4 299 47.5
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 1.3e-60 237.3 306 48.0
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.7e-60 236.9 301 47.8
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 8.5e-60 234.6 304 46.7
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 1.1e-59 234.2 294 49.0
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 1.1e-59 234.2 312 47.1
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 1.9e-59 233.4 299 47.8
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 2.5e-59 233.0 306 49.0
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 5.5e-59 231.9 304 47.0
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 7.2e-59 231.5 266 52.3
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 9.4e-59 231.1 309 46.3
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 1.2e-58 230.7 306 48.7
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 1.2e-58 230.7 305 46.2
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 4.6e-58 228.8 307 46.3
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 6.1e-58 228.4 302 45.4
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 7.9e-58 228.0 301 46.5
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 7.9e-58 228.0 301 46.5
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 7.9e-58 228.0 308 47.7
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 1.4e-57 227.3 305 47.5
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 1.8e-57 226.9 363 41.6
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 2.3e-57 226.5 307 46.6
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 3.0e-57 226.1 305 46.6
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 3.0e-57 226.1 308 46.1
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 5.1e-57 225.3 305 45.6
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 1.5e-56 223.8 294 47.3
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 2.0e-56 223.4 305 46.6
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 3.3e-56 222.6 294 45.9
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 4.3e-56 222.2 306 45.1
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 7.4e-56 221.5 301 43.5
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 9.7e-56 221.1 308 46.8
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 1.3e-55 220.7 304 46.1
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 1.3e-55 220.7 304 45.4
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 3.7e-55 219.2 302 45.0
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 3.7e-55 219.2 299 46.8
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 8.2e-55 218.0 302 44.4
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 4.1e-54 215.7 298 44.6
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 6.9e-54 214.9 290 44.8
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 2.6e-53 213.0 277 46.2
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 2.6e-53 213.0 305 44.9
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 3.4e-53 212.6 294 44.6
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 5.0e-52 208.8 298 44.0
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 1.1e-51 207.6 295 45.8
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 1.4e-51 207.2 305 43.9
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 3.2e-51 206.1 299 44.1
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 1.4e-49 200.7 304 43.8
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 6.7e-49 198.4 266 45.1
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 1.1e-46 191.0 206 52.4
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 2.6e-45 186.4 313 38.7
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 4.5e-45 185.7 313 38.7
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 1.7e-44 183.7 240 45.0
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 8.8e-41 171.4 235 46.8
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 2.2e-39 166.8 233 42.9
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 7.0e-38 161.8 144 62.5
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.1e-34 150.2 201 46.3
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 3.6e-34 149.4 199 45.7
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.2e-31 140.2 169 50.3
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 6.5e-28 128.6 248 35.5
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 2.5e-27 126.7 307 33.6
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 9.4e-27 124.8 219 42.5
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 3.0e-25 119.8 149 48.3
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 1.4e-22 110.9 177 41.2
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 7.7e-21 105.1 124 49.2
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.3e-20 103.6 105 54.3
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 8.0e-18 95.1 90 55.6
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 2.9e-15 86.7 111 45.0
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 7.0e-14 82.0 282 28.7
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 2.0e-13 80.5 66 62.1
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 7.8e-13 78.6 65 60.0
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 1.1e-11 74.7 122 41.0
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 1.5e-11 74.3 127 40.2
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 1.5e-11 74.3 207 31.9
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 7.3e-11 72.0 127 39.4
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 7.3e-11 72.0 120 41.7
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 2.1e-10 70.5 127 38.6
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 2.3e-09 67.0 65 49.2
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 4.0e-09 66.2 120 38.3
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 1.2e-08 64.7 120 37.5


User provided reference genes

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