Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p32650 Brassica napus HOM05D004544 ORTHO05D005504 5.6e-259 897.1 460 100.0
BcaC02g10108 Brassica carinata HOM05D004544 ORTHO05D005504 3.1e-257 891.3 460 99.3
BolC4t24833H Brassica oleracea HOM05D004544 ORTHO05D005504 1.7e-255 885.6 461 98.9
BraA04t15912Z Brassica rapa HOM05D004544 ORTHO05D005504 1.4e-254 882.5 460 98.0
A04p01890 Brassica napus HOM05D004544 ORTHO05D005504 2.4e-254 881.7 457 98.5
BcaB02g08195 Brassica carinata HOM05D004544 ORTHO05D005504 3.0e-252 874.8 460 97.2
Thhalv10005961m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 1.0e-244 849.7 457 95.0
AT3G60070 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 7.3e-243 843.6 460 93.9
Carub.0005s2680 Capsella rubella HOM05D004544 ORTHO05D005504 1.6e-242 842.4 457 93.4
AL5G42260 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 6.8e-241 837.0 461 93.7
Sp5g03140 Schrenkiella parvula HOM05D004544 ORTHO05D005504 4.4e-240 834.3 457 93.2
Aa31LG10G14230 Aethionema arabicum HOM05D004544 ORTHO05D005504 1.3e-220 769.6 456 86.8
CARHR139460 Cardamine hirsuta HOM05D004544 ORTHO05D005504 5.3e-217 757.7 460 84.1
Sp4g26350 Schrenkiella parvula HOM05D004544 ORTHO05D005504 4.5e-216 754.6 461 83.3
Thhalv10001436m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 5.8e-216 754.2 461 83.5
A05p04480 Brassica napus HOM05D004544 ORTHO05D005504 4.2e-214 748.0 461 83.1
AT2G44280 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 7.1e-214 747.3 455 83.3
BcaB02g08807 Brassica carinata HOM05D004544 ORTHO05D005504 9.3e-214 746.9 461 83.1
BraA05t19424Z Brassica rapa HOM05D004544 ORTHO05D005504 9.3e-214 746.9 461 83.1
Carub.0004s2687 Capsella rubella HOM05D004544 ORTHO05D005504 1.2e-213 746.5 455 83.5
AL4G43240 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 1.6e-213 746.1 455 83.3
BcaNung06603 Brassica carinata HOM05D004544 ORTHO05D005504 2.7e-213 745.3 461 82.6
BolC4t22159H Brassica oleracea HOM05D004544 ORTHO05D005504 2.7e-213 745.3 461 82.6
THA.LOC104817137 Tarenaya hassleriana HOM05D004544 ORTHO05D005504 7.9e-213 743.8 452 83.4
C04p05190 Brassica napus HOM05D004544 ORTHO05D005504 5.1e-212 741.1 461 82.6
BolC4t28598H Brassica oleracea HOM05D004544 ORTHO05D005504 5.6e-211 737.6 461 82.0
A04p33250 Brassica napus HOM05D004544 ORTHO05D005504 6.2e-210 734.2 460 81.5
BraA04t18786Z Brassica rapa HOM05D004544 ORTHO05D005504 6.2e-210 734.2 460 81.5
C04p70950 Brassica napus HOM05D004544 ORTHO05D005504 7.6e-208 727.2 488 77.5
Aa31LG1G25900 Aethionema arabicum HOM05D004544 ORTHO05D005504 2.9e-207 725.3 479 78.9
BcaB06g29367 Brassica carinata HOM05D004544 ORTHO05D005504 1.4e-201 706.4 482 77.2
Atru.chr12.1432 Acer truncatum HOM05D004544 ORTHO05D005504 4.8e-186 654.8 452 72.8
Duzib068G1099 Durio zibethinus HOM05D004544 ORTHO05D005504 1.0e-183 647.1 457 71.6
CiPaw.13G000600 Carya illinoinensis HOM05D004544 ORTHO05D005504 1.3e-183 646.7 452 71.2
Thecc.08G193200 Theobroma cacao HOM05D004544 ORTHO05D005504 3.8e-183 645.2 457 72.2
Ciclev10031412m.g Citrus clementina HOM05D004544 ORTHO05D005504 6.5e-183 644.4 464 69.4
RcHm_v2.0_Chr1g0313141 Rosa chinensis HOM05D004544 ORTHO05D005504 3.6e-181 638.6 453 71.1
TWI09G1596 Tripterygium wilfordii HOM05D004544 ORTHO05D005504 3.6e-181 638.6 457 70.0
CANSAT11G0055 Cannabis sativa HOM05D004544 ORTHO05D005504 4.7e-181 638.3 457 71.3
Potri.001G232100 Populus trichocarpa HOM05D004544 ORTHO05D005504 1.4e-180 636.7 451 70.3
Cpa.g.c29747 Carica papaya HOM05D004544 ORTHO05D005504 5.2e-180 634.8 392 81.1
Eucgr.E04336 Eucalyptus grandis HOM05D004544 ORTHO05D005504 5.2e-180 634.8 437 70.7
Cfa010700 Carpinus fangiana HOM05D004544 ORTHO05D005504 6.7e-180 634.4 452 70.4
FvH4_c5g00010 Fragaria vesca HOM05D004544 ORTHO05D005504 1.5e-179 633.3 453 70.6
Gohir.D08G037000 Gossypium hirsutum HOM05D004544 ORTHO05D005504 2.0e-179 632.9 457 69.8
Gorai.004G035000 Gossypium raimondii HOM05D004544 ORTHO05D005504 2.0e-179 632.9 457 69.8
PGR031G1320 Punica granatum HOM05D004544 ORTHO05D005504 2.0e-179 632.9 457 69.6
Potri.009G024600 Populus trichocarpa HOM05D004544 ORTHO05D005504 4.4e-179 631.7 451 69.4
FAN01G0284 Fragaria x ananassa HOM05D004544 ORTHO05D005504 2.8e-178 629.0 453 70.0
Lj3g0003623 Lotus japonicus HOM05D004544 ORTHO05D005504 5.3e-177 624.8 449 71.0
Lalb_Chr25g0283741 Lupinus albus HOM05D004544 ORTHO05D005504 5.3e-177 624.8 449 71.3
Glyma.15G267700 Glycine max HOM05D004544 ORTHO05D005504 7.0e-177 624.4 448 71.0
arahy.Tifrunner.gnm1.ann1.HLF3VC Arachis hypogaea HOM05D004544 ORTHO05D005504 1.2e-176 623.6 477 68.3
arahy.Tifrunner.gnm1.ann1.ZSC88Q Arachis hypogaea HOM05D004544 ORTHO05D005504 2.0e-176 622.9 477 68.3
MD02G1320400 Malus domestica HOM05D004544 ORTHO05D005504 2.0e-176 622.9 457 69.6
Medtr2g062270 Medicago truncatula HOM05D004544 ORTHO05D005504 2.0e-176 622.9 449 69.7
Glyma.08G158600 Glycine max HOM05D004544 ORTHO05D005504 4.5e-176 621.7 448 70.8
Rhsim07G0049300 Rhododendron simsii HOM05D004544 ORTHO05D005504 1.0e-175 620.5 452 68.6
CsaV3_7G031530 Cucumis sativus L. HOM05D004544 ORTHO05D005504 6.5e-175 617.8 448 69.6
TPR.G16160 Trifolium pratense HOM05D004544 ORTHO05D005504 1.5e-174 616.7 449 68.8
GSVIVG01001349001 Vitis vinifera HOM05D004544 ORTHO05D005504 1.5e-174 616.7 455 67.9
Phvul.005G042600 Phaseolus vulgaris HOM05D004544 ORTHO05D005504 2.1e-173 612.8 448 70.1
Ca_03221_v3 Cicer arietinum L. HOM05D004544 ORTHO05D005504 2.7e-173 612.5 450 68.4
VMungo1080G0174 Vigna mungo HOM05D004544 ORTHO05D005504 2.7e-173 612.5 448 69.6
CSS0044763 Camellia sinensis var. sinensis HOM05D004544 ORTHO05D005504 3.6e-173 612.1 457 67.4
Sopen01g033220 Solanum pennellii HOM05D004544 ORTHO05D005504 3.3e-171 605.5 456 65.1
Solyc01g073660.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 4.4e-171 605.1 456 65.1
CAN.G1361.5 Capsicum annuum HOM05D004544 ORTHO05D005504 7.5e-171 604.4 450 66.0
Dinv43503 Davidia involucrata HOM05D004544 ORTHO05D005504 7.5e-171 604.4 452 67.3
TAR633G2617 Trochodendron aralioides HOM05D004544 ORTHO05D005504 7.5e-171 604.4 453 66.7
Actinidia05839 Actinidia chinensis HOM05D004544 ORTHO05D005504 9.7e-171 604.0 452 67.7
Aqoxy1G00422 Aquilegia oxysepala HOM05D004544 ORTHO05D005504 1.7e-170 603.2 459 66.0
Nn7g35919 Nelumbo nucifera HOM05D004544 ORTHO05D005504 8.2e-170 600.9 457 67.2
PSO170G0355 Papaver somniferum HOM05D004544 ORTHO05D005504 8.2e-170 600.9 456 67.5
Cc02_g26820 Coffea canephora HOM05D004544 ORTHO05D005504 1.4e-169 600.1 452 67.3
MBI01_g14445_MAGBIO Magnolia biondii HOM05D004544 ORTHO05D005504 1.4e-169 600.1 464 66.8
EL10Ac1g02232 Beta vulgaris HOM05D004544 ORTHO05D005504 1.8e-169 599.7 449 66.1
EL10Ac1g02233 Beta vulgaris HOM05D004544 ORTHO05D005504 1.8e-169 599.7 449 66.1
Psat1g129360 Pisum sativum HOM05D004544 ORTHO05D005504 1.8e-169 599.7 449 67.9
vmacro22467 Vaccinium macrocarpon HOM05D004544 ORTHO05D005504 4.1e-169 598.6 469 65.5
ClCG09G003650 Citrullus lanatus HOM05D004544 ORTHO05D005504 5.3e-169 598.2 490 63.3
AUR62035404 Chenopodium quinoa HOM05D004544 ORTHO05D005504 1.2e-168 597.0 455 66.4
Oeu060709.1 Olea europaea HOM05D004544 ORTHO05D005504 1.2e-168 597.0 452 66.8
PSO063G0048 Papaver somniferum HOM05D004544 ORTHO05D005504 2.7e-168 595.9 457 67.0
Sed0009480 Sechium edule HOM05D004544 ORTHO05D005504 2.7e-168 595.9 448 66.5
Hma1.2p1_0128F.1_g059850 Hydrangea macrophylla HOM05D004544 ORTHO05D005504 1.7e-167 593.2 429 68.8
Manes.10G153000 Manihot esculenta HOM05D004544 ORTHO05D005504 1.9e-166 589.7 400 74.2
DCAR_024995 Daucus carota HOM05D004544 ORTHO05D005504 3.2e-166 589.0 458 67.7
Gohir.A08G026600 Gossypium hirsutum HOM05D004544 ORTHO05D005504 5.5e-166 588.2 457 65.9
SGA_v2.0_scaffold260G45890 Striga asiatica HOM05D004544 ORTHO05D005504 3.6e-165 585.5 482 62.0
Nn2g15791 Nelumbo nucifera HOM05D004544 ORTHO05D005504 8.0e-165 584.3 457 65.9
Sc03g0003850 Simmondsia chinensis HOM05D004544 ORTHO05D005504 1.2e-163 580.5 454 66.1
ECA236G1315 Erigeron canadensis HOM05D004544 ORTHO05D005504 9.8e-163 577.4 443 64.3
Nn2g15790 Nelumbo nucifera HOM05D004544 ORTHO05D005504 2.8e-162 575.9 445 66.7
HanXRQChr04g0117441 Helianthus annuus HOM05D004544 ORTHO05D005504 4.8e-162 575.1 443 64.3
PGSC0003DMG400031131 Solanum tuberosum HOM05D004544 ORTHO05D005504 1.3e-159 567.0 456 62.3
unitig_749.g13487 Utricularia gibba HOM05D004544 ORTHO05D005504 1.3e-159 567.0 464 61.9
HPP92_012523 Vanilla planifolia HOM05D004544 ORTHO05D005504 3.8e-159 565.5 445 64.0
CDE04G3336 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 3.2e-158 562.4 446 63.9
SalBow5G3691 Salvia bowleyana HOM05D004544 ORTHO05D005504 7.2e-158 561.2 475 61.7
Peaxi162Scf00402g00941 Petunia axillaris HOM05D004544 ORTHO05D005504 2.7e-157 559.3 452 61.9
AUR62041888 Chenopodium quinoa HOM05D004544 ORTHO05D005504 3.0e-156 555.8 550 54.7
Lsat_1_v5_gn_7_33840 Lactuca sativa HOM05D004544 ORTHO05D005504 1.5e-155 553.5 420 64.5
TAR633G0112 Trochodendron aralioides HOM05D004544 ORTHO05D005504 3.4e-155 552.4 421 67.2
Os07g0578200 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 1.7e-151 540.0 458 60.7
Haze_03276 Corylus avellana HOM05D004544 ORTHO05D005504 2.3e-151 539.7 396 68.4
ATR0001G054 Amborella trichopoda HOM05D004544 ORTHO05D005504 2.5e-150 536.2 397 67.8
Zm00001eb325500 Zea mays HOM05D004544 ORTHO05D005504 9.5e-150 534.3 474 58.9
CDE05G1716 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 4.7e-149 531.9 479 57.8
Os03g0168000 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 4.0e-148 528.9 447 59.3
Zm00001eb402450 Zea mays HOM05D004544 ORTHO05D005504 5.0e-143 511.9 446 58.1
CARHR170380 Cardamine hirsuta HOM05D004544 ORTHO05D005504 8.9e-140 501.1 290 90.0
Nitab4.5_0000468g0180 Nicotiana tabacum HOM05D004544 ORTHO05D005504 5.8e-139 498.4 405 61.7
Peaxi162Scf00245g00710 Petunia axillaris HOM05D004544 ORTHO05D005504 2.9e-138 496.1 453 55.8
Mapoly0020s0019 Marchantia polymorpha HOM05D004544 ORTHO05D005504 3.7e-138 495.7 449 57.5
CAN.G928.1 Capsicum annuum HOM05D004544 ORTHO05D005504 6.6e-135 485.0 433 55.9
Sopen10g026790 Solanum pennellii HOM05D004544 ORTHO05D005504 2.5e-134 483.0 448 54.0
Nitab4.5_0004502g0040 Nicotiana tabacum HOM05D004544 ORTHO05D005504 3.3e-134 482.6 384 63.3
FAN01G3148 Fragaria x ananassa HOM05D004544 ORTHO05D005504 2.2e-130 469.9 350 68.9
AagrBONN_evm.TU.Sc2ySwM_368.1671 Anthoceros agrestis HOM05D004544 ORTHO05D005504 2.4e-129 466.5 455 51.4
Pp3c17_11410 Physcomitrium patens HOM05D004544 ORTHO05D005504 2.1e-128 463.4 448 53.3
CAN.G1361.4 Capsicum annuum HOM05D004544 ORTHO05D005504 1.5e-123 447.2 458 50.7
SMO353G0186 Selaginella moellendorffii HOM05D004544 ORTHO05D005504 3.8e-122 442.6 399 56.1
Sopen01g033230 Solanum pennellii HOM05D004544 ORTHO05D005504 8.4e-122 441.4 458 49.6
Solyc01g073670.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 1.9e-121 440.3 458 49.3
FAN01G0042 Fragaria x ananassa HOM05D004544 ORTHO05D005504 3.0e-119 433.0 441 56.0
Atru.chr11.2714 Acer truncatum HOM05D004544 ORTHO05D005504 3.3e-118 429.5 462 53.0
QL04p001964 Quercus lobata HOM05D004544 ORTHO05D005504 1.2e-117 427.6 310 69.7
Peaxi162Scf00402g00940 Petunia axillaris HOM05D004544 ORTHO05D005504 2.4e-116 423.3 453 48.8
Prupe.2G001700 Prunus persica HOM05D004544 ORTHO05D005504 3.0e-111 406.4 321 65.4
PGSC0003DMG400007701 Solanum tuberosum HOM05D004544 ORTHO05D005504 2.1e-101 373.6 448 45.1
SEGI_30614 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 2.7e-96 356.7 256 68.4
PGSC0003DMG400023279 Solanum tuberosum HOM05D004544 ORTHO05D005504 2.7e-96 356.7 392 49.7
FAN06G4582 Fragaria x ananassa HOM05D004544 ORTHO05D005504 1.3e-87 327.8 265 64.2
PGSC0003DMG400028978 Solanum tuberosum HOM05D004544 ORTHO05D005504 5.0e-82 309.3 455 39.3
Sabra09G0016300 Salix brachista HOM05D004544 ORTHO05D005504 8.2e-77 292.0 314 53.2
MELO3C023501.2 Cucumis melo HOM05D004544 ORTHO05D005504 6.1e-72 275.8 448 39.7
Zm00001eb107640 Zea mays HOM05D004544 ORTHO05D005504 3.0e-71 273.5 195 67.2
QL04p001975 Quercus lobata HOM05D004544 ORTHO05D005504 1.9e-57 227.6 176 65.9
Migut.B01408 Erythranthe guttata HOM05D004544 ORTHO05D005504 5.2e-55 219.5 159 70.4
Migut.B01407 Erythranthe guttata HOM05D004544 ORTHO05D005504 7.5e-54 215.7 129 77.5
Actinidia31716 Actinidia chinensis HOM05D004544 ORTHO05D005504 3.0e-47 193.7 152 61.8
SEGI_18579 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 7.5e-46 189.1 193 51.3
Psat2g024040 Pisum sativum HOM05D004544 ORTHO05D005504 1.5e-38 164.9 126 65.1
MELO3C000237.2 Cucumis melo HOM05D004544 ORTHO05D005504 2.6e-38 164.1 122 68.9
Solyc01g089990.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 4.0e-31 140.2 94 70.2
Migut.B01409 Erythranthe guttata HOM05D004544 ORTHO05D005504 1.8e-28 131.3 136 52.2
Actinidia31717 Actinidia chinensis HOM05D004544 ORTHO05D005504 2.3e-26 124.4 119 58.0
Hund18992 Selenicereus undatus HOM05D004544 ORTHO05D005504 5.6e-25 119.8 74 71.6
Lj7A562T25 Lonicera japonica HOM05D004544 ORTHO05D005504 9.5e-25 119.0 112 53.6
QL04p001512 Quercus lobata HOM05D004544 ORTHO05D001929 1.3e-21 108.6 82 65.9
Os06g0628032 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 4.1e-20 103.6 99 50.5
Glyma.20G091501 Glycine max HOM05D004544 ORTHO05D005504 5.2e-15 86.7 58 75.9
QL04p001505 Quercus lobata HOM05D004544 ORTHO05D005504 6.4e-13 79.7 58 63.8
CAN.G913.7 Capsicum annuum HOM05D004544 ORTHO05D005504 4.1e-12 77.0 72 55.6
Haze_14723 Corylus avellana HOM05D004544 ORTHO05D005504 1.0e-10 72.4 75 56.0
Nitab4.5_0006570g0020 Nicotiana tabacum HOM05D004544 ORTHO05D005504 1.1e-07 62.4 42 69.0
FvH4_5g06577 Fragaria vesca HOM05D000025 ORTHO05D000040 4.4e-06 57.0 37 75.7


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