Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 2.3e-153 545.8 339 100.0
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 2.2e-143 512.7 369 88.9
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 5.0e-132 474.9 345 90.7
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 2.6e-128 462.6 363 86.0
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 2.5e-123 446.0 354 81.6
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 3.7e-119 432.2 359 78.0
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 1.1e-118 430.6 352 79.8
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 1.9e-115 419.9 359 77.4
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 3.3e-115 419.1 363 75.5
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 2.9e-111 406.0 357 72.5
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 2.0e-104 383.3 353 73.1
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 9.6e-99 364.4 351 58.7
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 1.6e-85 320.5 290 56.9
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 6.7e-84 315.1 293 59.0
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 8.7e-84 314.7 359 48.5
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 1.1e-83 314.3 348 47.7
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 4.8e-82 308.9 280 57.1
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 1.1e-81 307.8 284 57.4
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 1.8e-81 307.0 281 54.8
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 2.4e-81 306.6 289 56.4
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 4.0e-81 305.8 275 54.5
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 9.0e-81 304.7 351 58.1
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 4.5e-80 302.4 285 55.1
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-79 300.8 353 46.2
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.7e-79 300.4 350 46.3
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 2.9e-79 299.7 276 54.3
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 2.9e-79 299.7 286 56.3
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 3.8e-79 299.3 353 45.9
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 8.4e-79 298.1 346 46.2
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 1.1e-78 297.7 271 57.9
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 1.1e-78 297.7 278 55.0
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 1.4e-78 297.4 272 56.6
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.5e-78 296.6 353 46.2
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 5.5e-78 295.4 290 55.5
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 7.1e-78 295.0 282 54.6
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 2.1e-77 293.5 279 53.0
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 3.5e-77 292.7 279 52.7
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 3.5e-77 292.7 286 52.8
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 7.9e-77 291.6 287 53.3
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.9e-76 289.3 350 46.3
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 8.7e-76 288.1 350 46.3
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 1.1e-75 287.7 276 53.3
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 1.5e-75 287.3 350 45.7
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 2.5e-75 286.6 288 55.2
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 2.5e-75 286.6 279 53.0
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 3.3e-75 286.2 284 50.4
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 4.3e-75 285.8 276 57.6
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 9.6e-75 284.6 278 56.8
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 1.6e-74 283.9 275 56.7
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 3.7e-74 282.7 286 51.7
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.1e-73 281.2 273 55.3
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 1.1e-73 281.2 275 57.5
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 1.4e-73 280.8 275 51.3
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 1.4e-73 280.8 287 53.7
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 2.4e-73 280.0 357 43.1
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 2.4e-73 280.0 278 51.1
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 9.0e-73 278.1 278 52.5
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 1.2e-72 277.7 273 54.6
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 1.2e-72 277.7 282 52.8
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 4.5e-72 275.8 301 49.5
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 7.6e-72 275.0 445 43.8
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 1.0e-71 274.6 283 53.0
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 1.7e-71 273.9 354 45.2
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 2.2e-71 273.5 283 53.0
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.9e-71 273.1 285 52.6
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.1e-70 271.2 350 44.6
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.4e-70 270.8 350 44.6
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 5.5e-70 268.9 345 45.5
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 9.3e-70 268.1 284 53.5
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.8e-68 263.8 304 46.4
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 2.3e-68 263.5 254 53.9
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 5.1e-68 262.3 256 54.7
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 5.1e-68 262.3 285 53.7
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 4.1e-65 252.7 284 45.4
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 4.1e-65 252.7 277 47.3
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 7.7e-64 248.4 202 59.4
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 3.2e-62 243.0 257 51.4
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 5.5e-62 242.3 274 46.4
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 1.2e-61 241.1 291 47.1
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 9.7e-59 231.5 293 44.0
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 9.7e-59 231.5 258 50.8
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.7e-58 230.7 283 44.2
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.8e-57 227.3 283 44.2
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 1.3e-55 221.1 284 46.1
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 1.4e-54 217.6 360 40.6
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 2.1e-45 187.2 258 45.0
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 8.0e-45 185.3 182 51.1
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 4.1e-41 172.9 182 51.1
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 2.0e-40 170.6 459 30.1
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 2.6e-40 170.2 285 36.5
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 4.5e-40 169.5 187 49.2
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 6.5e-39 165.6 171 50.9
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 6.5e-39 165.6 185 49.2
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.9e-38 164.1 233 42.5
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 9.4e-38 161.8 177 52.0
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 1.8e-36 157.5 161 52.8
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 1.7e-34 151.0 164 44.5
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 1.9e-30 137.5 266 32.0
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 3.2e-30 136.7 103 65.0
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 9.8e-27 125.2 165 40.0
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 6.6e-23 112.5 291 27.5
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 1.3e-15 88.2 94 46.8
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 8.6e-15 85.5 92 44.6
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 1.1e-14 85.1 168 30.4
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 2.1e-13 80.9 100 41.0
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 2.8e-13 80.5 224 29.0
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.2e-10 70.9 46 65.2
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 8.3e-10 68.9 88 39.8
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 1.9e-09 67.8 132 31.1
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 2.4e-09 67.4 59 50.8
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 2.3e-07 60.8 37 67.6
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 5.0e-07 59.7 106 36.8
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.5e-06 58.2 47 51.1
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 3.3e-06 57.0 44 59.1
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 9.5e-06 55.5 65 43.1


User provided reference genes

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