Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 3.3e-124 448.4 219 100.0
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 2.0e-110 402.5 255 81.6
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 1.8e-106 389.4 254 78.3
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 9.2e-103 377.1 253 74.7
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 3.6e-99 365.2 253 73.1
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 5.2e-98 361.3 253 72.3
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 8.9e-98 360.5 254 71.3
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.6e-97 359.0 253 70.8
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 5.8e-97 357.8 255 71.4
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 5.8e-97 357.8 254 72.0
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 1.1e-95 353.6 177 100.0
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 1.9e-92 342.8 272 67.6
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 7.3e-92 340.9 231 75.3
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 4.7e-91 338.2 254 67.3
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.4e-87 325.9 254 63.8
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 4.0e-82 308.5 227 69.2
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 3.8e-80 302.0 250 62.8
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.6e-78 296.6 254 56.7
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.0e-77 293.9 254 57.9
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 1.3e-77 293.5 254 56.7
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 1.3e-77 293.5 254 57.1
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 1.7e-77 293.1 254 57.1
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 3.0e-77 292.4 254 56.7
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 8.7e-77 290.8 254 57.5
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 1.5e-76 290.0 253 56.5
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 1.5e-76 290.0 254 55.9
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 1.9e-76 289.7 254 54.7
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.9e-76 289.7 254 54.7
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 4.3e-76 288.5 254 57.5
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 9.6e-76 287.3 253 56.1
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 1.3e-75 287.0 254 55.9
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.6e-75 286.6 212 68.9
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 1.6e-75 286.6 254 55.9
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 1.6e-75 286.6 254 55.9
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 2.1e-75 286.2 254 55.9
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 3.6e-75 285.4 254 55.5
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 6.2e-75 284.6 253 56.1
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 8.1e-75 284.3 254 56.7
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.1e-74 283.9 255 53.7
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.1e-74 283.9 253 54.5
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 1.4e-74 283.5 254 52.8
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 1.8e-74 283.1 215 67.9
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.8e-74 283.1 254 52.8
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 1.8e-74 283.1 254 54.7
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 2.4e-74 282.7 189 72.5
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 2.4e-74 282.7 254 54.7
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 5.3e-74 281.6 254 52.4
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 5.3e-74 281.6 255 55.3
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 5.3e-74 281.6 252 55.6
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 5.3e-74 281.6 252 55.6
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 9.0e-74 280.8 254 54.3
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 9.0e-74 280.8 255 55.3
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.2e-73 280.4 255 54.1
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 1.2e-73 280.4 254 52.4
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 1.2e-73 280.4 253 54.5
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 2.0e-73 279.6 253 54.5
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 2.6e-73 279.3 255 53.7
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 2.6e-73 279.3 254 53.1
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 3.4e-73 278.9 253 53.8
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.5e-73 278.5 255 53.7
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.5e-73 278.5 255 53.7
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 7.6e-73 277.7 255 53.3
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 9.9e-73 277.3 255 53.7
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 6.4e-72 274.6 255 54.1
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 1.1e-71 273.9 254 53.5
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 1.4e-71 273.5 252 53.2
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 5.5e-71 271.6 259 51.7
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 3.5e-70 268.9 256 53.1
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 6.0e-70 268.1 254 53.1
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 6.0e-70 268.1 254 51.6
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 1.0e-69 267.3 255 52.9
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 2.3e-69 266.2 252 51.2
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 8.7e-69 264.2 254 50.0
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.1e-68 263.8 244 52.0
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 5.6e-68 261.5 254 52.4
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 2.1e-67 259.6 253 49.8
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 8.1e-67 257.7 270 49.6
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 3.1e-66 255.8 239 54.4
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 6.9e-66 254.6 205 60.0
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 9.0e-66 254.2 254 49.6
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 4.5e-65 251.9 271 46.1
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 5.8e-65 251.5 257 49.0
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 7.6e-65 251.1 254 49.2
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 7.6e-65 251.1 227 54.2
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 7.6e-65 251.1 258 48.4
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 1.1e-63 247.3 252 48.0
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 1.1e-63 247.3 227 55.1
BcaB02g08144 Brassica carinata HOM05D000590 ORTHO05D006825 9.3e-63 244.2 224 58.0
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 2.7e-62 242.7 224 54.9
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 1.0e-61 240.7 272 46.0
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 1.3e-61 240.4 254 48.8
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 8.7e-61 237.7 230 52.2
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 1.9e-60 236.5 190 60.5
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 7.4e-60 234.6 189 60.8
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 9.6e-60 234.2 226 50.9
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 8.2e-59 231.1 254 47.6
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 7.6e-57 224.6 190 59.5
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 2.2e-56 223.0 257 45.5
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 1.4e-55 220.3 213 47.9
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 1.8e-53 213.4 241 45.6
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 7.4e-52 208.0 179 55.9
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 4.1e-50 202.2 243 45.7
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 1.5e-49 200.3 171 52.6
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 8.8e-45 184.5 164 64.0
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 7.4e-44 181.4 128 64.8
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 5.3e-42 175.3 254 39.4
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 2.6e-41 172.9 271 40.2
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 1.0e-40 171.0 204 44.1
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 6.5e-40 168.3 205 48.8
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 3.2e-39 166.0 192 47.4
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 4.7e-38 162.2 123 56.9
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 3.0e-37 159.5 232 39.2
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 3.0e-37 159.5 262 36.3
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 3.9e-37 159.1 217 40.1
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 3.1e-34 149.4 207 40.6
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 5.5e-31 138.7 228 36.8
CSS0003243 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 3.0e-29 132.9 134 50.0
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 8.8e-29 131.3 112 55.4
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 1.5e-28 130.6 117 54.7
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 1.5e-28 130.6 252 31.3
Sc26g0000660 Simmondsia chinensis HOM05D000590 ORTHO05D006825 2.0e-28 130.2 117 50.4
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 4.4e-28 129.0 260 32.7
GSVIVG01027114001 Vitis vinifera HOM05D000590 ORTHO05D006825 5.7e-28 128.6 142 45.1
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 1.3e-27 127.5 206 35.4
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 1.2e-25 120.9 119 53.8
CARHR055570 Cardamine hirsuta HOM05D000590 ORTHO05D006825 2.7e-25 119.8 78 69.2
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 3.5e-25 119.4 119 52.1
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 1.0e-24 117.9 197 36.5
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 1.5e-23 114.0 123 50.4
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 4.2e-23 112.5 119 47.9
Zm00001eb338700 Zea mays HOM05D000590 ORTHO05D006825 6.1e-22 108.6 232 28.9
SHI13292 Sapria himalayana HOM05D000590 ORTHO05D006825 2.7e-17 93.2 73 58.9
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 1.3e-16 90.9 192 30.2
GSVIVG01027108001 Vitis vinifera HOM05D000590 ORTHO05D006825 6.5e-16 88.6 64 59.4
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 2.0e-12 77.0 64 65.6
Sabra02G0141900 Salix brachista HOM05D000590 ORTHO05D006825 2.8e-11 73.2 72 47.2
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 3.7e-11 72.8 64 60.9
BolC4t24651H Brassica oleracea HOM05D000590 ORTHO05D006825 6.3e-11 72.0 92 43.5
unitig_747.g21341 Utricularia gibba HOM05D000590 ORTHO05D006825 2.7e-09 66.6 199 27.6
Zm00001eb197190 Zea mays HOM05D002169 ORTHO05D023180 1.2e-06 57.8 153 26.8
BcaC02g10248 Brassica carinata HOM05D000590 ORTHO05D006825 2.8e-06 56.6 24 100.0
MD07G1149100 Malus domestica HOM05D000590 ORTHO05D006825 4.7e-06 55.8 41 56.1


User provided reference genes

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