Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p30670 Brassica napus HOM05D010079 ORTHO05D011550 1.1e-169 599.7 288 100.0
AT3G62380 Arabidopsis thaliana HOM05D010079 ORTHO05D011550 2.4e-82 309.7 329 51.4
BcaNung03153 Brassica carinata HOM05D010079 ORTHO05D011550 2.6e-68 263.1 322 48.8
Carub.0005s2910 Capsella rubella HOM05D010079 ORTHO05D011550 2.1e-62 243.4 329 47.1
AL5G45170 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 1.4e-58 230.7 297 47.5
AL5G45150 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 8.8e-45 184.9 295 44.7
Thhalv10009972m.g Eutrema salsugineum HOM05D010079 ORTHO05D011550 5.9e-41 172.2 198 46.5
Sp7g12250 Schrenkiella parvula HOM05D010079 ORTHO05D011550 5.5e-39 165.6 191 47.1
CARHR172720 Cardamine hirsuta HOM05D010079 ORTHO05D011550 2.0e-36 157.1 208 43.8
AL2G23450 Arabidopsis lyrata HOM05D026666 ORTHO05D026802 4.9e-35 152.5 173 46.8
BraA09t40629Z Brassica rapa HOM05D010079 ORTHO05D011550 8.3e-35 151.8 170 45.3
Thhalv10017914m.g Eutrema salsugineum HOM05D010079 ORTHO05D011550 1.1e-34 151.4 283 36.7
AL2G30500 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 1.3e-32 144.4 175 46.9
AL2G29740 Arabidopsis lyrata HOM05D010079 ORTHO05D011550 1.7e-32 144.1 173 46.2
Sp1g33930 Schrenkiella parvula HOM05D010079 ORTHO05D011550 2.9e-27 126.7 304 35.2
SpUn0058_0010 Schrenkiella parvula HOM05D010079 ORTHO05D011550 2.9e-27 126.7 304 35.2
AL5G45090 Arabidopsis lyrata HOM05D001738 ORTHO05D011550 4.9e-27 125.9 149 46.3
AT1G71320 Arabidopsis thaliana HOM05D010079 ORTHO05D011550 4.9e-27 125.9 175 42.3
AT3G62350 Arabidopsis thaliana HOM05D010079 ORTHO05D011550 4.9e-27 125.9 208 38.9
Carub.0002s1775 Capsella rubella HOM05D010079 ORTHO05D011550 4.9e-27 125.9 187 41.2
Carub.0002s1777 Capsella rubella HOM05D010079 ORTHO05D011550 4.9e-27 125.9 213 39.9
CARHR172670 Cardamine hirsuta HOM05D001738 ORTHO05D011550 1.1e-23 114.8 169 39.6
A09p51960 Brassica napus HOM05D010079 ORTHO05D032171 9.5e-23 111.7 185 42.2
Sp1g28940 Schrenkiella parvula HOM05D001738 ORTHO05D011550 6.4e-19 99.0 152 37.5
Thhalv10009802m.g Eutrema salsugineum HOM05D010079 ORTHO05D011550 8.3e-19 98.6 150 38.0
Carub.0005s2907 Capsella rubella HOM05D010079 ORTHO05D011550 1.2e-17 94.7 178 37.6
CARHR032950 Cardamine hirsuta HOM05D001738 ORTHO05D011550 1.6e-17 94.4 150 38.7
Carub.0001s3170 Capsella rubella HOM05D001738 ORTHO05D001644 9.5e-15 85.1 161 36.0
CARHR045390 Cardamine hirsuta HOM05D010079 ORTHO05D011550 1.6e-14 84.3 57 64.9
AT1G33530 Arabidopsis thaliana HOM05D001738 ORTHO05D011550 2.8e-14 83.6 252 31.0
BraA05t21312Z Brassica rapa HOM05D001738 ORTHO05D001644 3.6e-14 83.2 174 32.2
Sp1g29020 Schrenkiella parvula HOM05D001738 ORTHO05D011550 8.1e-14 82.0 159 35.2
Thhalv10027244m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 6.4e-11 72.4 118 36.4
C04p30690 Brassica napus HOM05D010079 ORTHO05D011550 8.3e-11 72.0 114 40.4
AL4G34310 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 1.1e-10 71.6 151 31.1
C05p07170 Brassica napus HOM05D005941 ORTHO05D007879 9.2e-10 68.6 158 31.6
AL4G41950 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 1.2e-09 68.2 157 33.1
AL4G37620 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 2.7e-09 67.0 165 30.9
A04p27510 Brassica napus HOM05D001738 ORTHO05D001644 4.6e-09 66.2 128 35.9
BraA04t18245Z Brassica rapa HOM05D001738 ORTHO05D001644 4.6e-09 66.2 128 35.9
BcaC01g05402 Brassica carinata HOM05D005941 ORTHO05D007879 6.0e-09 65.9 121 40.5
Carub.0005s2945 Capsella rubella HOM05D005941 ORTHO05D007879 6.0e-09 65.9 168 33.9
AL5G11230 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 1.0e-08 65.1 172 29.7
C03p26940 Brassica napus HOM05D005941 ORTHO05D007879 1.3e-08 64.7 121 40.5
C03p26950 Brassica napus HOM05D005941 ORTHO05D007879 1.3e-08 64.7 121 40.5
AL4G36610 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 2.3e-08 63.9 165 32.7
BcaC01g05484 Brassica carinata HOM05D005941 ORTHO05D007879 2.3e-08 63.9 121 39.7
CARHR288900 Cardamine hirsuta HOM05D001738 ORTHO05D001644 3.0e-08 63.5 153 28.8
BolC3t15077H Brassica oleracea HOM05D005941 ORTHO05D007879 3.9e-08 63.2 121 39.7
BolC4t28542H Brassica oleracea HOM05D005941 ORTHO05D007879 3.9e-08 63.2 172 30.8
CARHR224500 Cardamine hirsuta HOM05D005941 ORTHO05D007879 3.9e-08 63.2 107 35.5
CARHR134120 Cardamine hirsuta HOM05D005941 ORTHO05D007879 5.1e-08 62.8 98 34.7
C08p48460 Brassica napus HOM05D001738 ORTHO05D001644 6.6e-08 62.4 142 32.4
AT2G02030 Arabidopsis thaliana HOM05D001738 ORTHO05D001644 8.6e-08 62.0 124 32.3
BcaC06g33593 Brassica carinata HOM05D005941 ORTHO05D007879 8.6e-08 62.0 150 32.0
BolC7t45422H Brassica oleracea HOM05D005941 ORTHO05D007879 8.6e-08 62.0 150 32.0
BolC8t52384H Brassica oleracea HOM05D001738 ORTHO05D001644 8.6e-08 62.0 133 33.1
Carub.0004s1931 Capsella rubella HOM05D005941 ORTHO05D007879 8.6e-08 62.0 105 37.1
A09p40640 Brassica napus HOM05D001738 ORTHO05D001644 1.1e-07 61.6 154 29.2
C03p26250 Brassica napus HOM05D004167 ORTHO05D005012 1.1e-07 61.6 121 39.7
BolC3t15010H Brassica oleracea HOM05D004167 ORTHO05D005012 1.1e-07 61.6 121 39.7
CARHR144650 Cardamine hirsuta HOM05D001738 ORTHO05D001644 1.5e-07 61.2 170 29.4
AL7G36780 Arabidopsis lyrata HOM05D005941 ORTHO05D007879 1.9e-07 60.8 148 33.1
BcaC05g24772 Brassica carinata HOM05D005941 ORTHO05D007879 1.9e-07 60.8 153 30.7
AT4G17780 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 2.5e-07 60.5 176 30.1
BcaB02g10128 Brassica carinata HOM05D005941 ORTHO05D007879 2.5e-07 60.5 166 29.5
CARHR169220 Cardamine hirsuta HOM05D005941 ORTHO05D007879 2.5e-07 60.5 142 32.4
Thhalv10001524m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 2.5e-07 60.5 154 28.6
Thhalv10016716m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 2.5e-07 60.5 168 33.3
BcaNung06201 Brassica carinata HOM05D001738 ORTHO05D001644 3.3e-07 60.1 133 32.3
AL7G18540 Arabidopsis lyrata HOM05D001738 ORTHO05D007879 4.3e-07 59.7 163 31.3
AL7G18620 Arabidopsis lyrata HOM05D001738 ORTHO05D007879 4.3e-07 59.7 163 31.3
BcaC04g21532 Brassica carinata HOM05D001738 ORTHO05D001644 4.3e-07 59.7 161 29.8
CARHR138480 Cardamine hirsuta HOM05D005941 ORTHO05D007879 4.3e-07 59.7 151 30.5
A09p64880 Brassica napus HOM05D001738 ORTHO05D001644 5.6e-07 59.3 174 27.0
A03p50720 Brassica napus HOM05D005941 ORTHO05D007879 7.3e-07 58.9 121 32.2
BraA03t12634Z Brassica rapa HOM05D000007 ORTHO05D000017 7.3e-07 58.9 151 28.5
BcaB07g30712 Brassica carinata HOM05D001738 ORTHO05D001644 9.5e-07 58.5 166 28.3
A09p64540 Brassica napus HOM05D001738 ORTHO05D001644 9.5e-07 58.5 161 27.3
BraA09t41803Z Brassica rapa HOM05D001738 ORTHO05D001644 9.5e-07 58.5 161 27.3
Carub.0002s1606 Capsella rubella HOM05D001738 ORTHO05D001644 9.5e-07 58.5 96 34.4
Thecc.05G284500 Theobroma cacao HOM05D000007 ORTHO05D001644 9.5e-07 58.5 156 29.5
Aa31LG8G6370 Aethionema arabicum HOM05D001738 ORTHO05D001644 1.2e-06 58.2 157 29.3
Carub.0007s0742 Capsella rubella HOM05D005941 ORTHO05D007879 1.2e-06 58.2 158 31.0
CARHR130490 Cardamine hirsuta HOM05D005941 ORTHO05D007879 1.2e-06 58.2 120 34.2
AT1G49790 Arabidopsis thaliana HOM05D005941 ORTHO05D007879 1.6e-06 57.8 121 33.1
A03p34570 Brassica napus HOM05D000007 ORTHO05D000017 1.6e-06 57.8 151 28.5
BcaB03g14663 Brassica carinata HOM05D000007 ORTHO05D000017 2.8e-06 57.0 148 26.4
A02p33710 Brassica napus HOM05D001738 ORTHO05D001644 2.8e-06 57.0 96 36.5
BraA02t08389Z Brassica rapa HOM05D001738 ORTHO05D001644 2.8e-06 57.0 96 36.5
Carub.0007s2358 Capsella rubella HOM05D005941 ORTHO05D007879 3.6e-06 56.6 159 27.0
C04p04390 Brassica napus HOM05D005941 ORTHO05D007879 6.2e-06 55.8 117 33.3
BolC4t22072H Brassica oleracea HOM05D005941 ORTHO05D007879 6.2e-06 55.8 117 33.3


User provided reference genes

Program Settings