Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p29390 Brassica napus HOM05D007592 ORTHO05D004645 1.6e-80 302.8 158 100.0
BraA09t38299Z Brassica rapa HOM05D007592 ORTHO05D004645 4.8e-45 184.9 140 69.3
BolC6t37310H Brassica oleracea HOM05D007592 ORTHO05D004645 2.7e-43 179.1 140 67.9
AT1G24380 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 1.3e-42 176.8 148 67.6
C06p21250 Brassica napus HOM05D007592 ORTHO05D004645 7.5e-38 161.0 128 67.2
AT4G10230 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 3.5e-35 152.1 127 66.1
DCAR_018612 Daucus carota HOM05D007592 ORTHO05D004645 5.9e-27 124.8 150 46.7
Ciclev10033648m.g Citrus clementina HOM05D007592 ORTHO05D004645 7.8e-27 124.4 138 51.4
Thhalv10019741m.g Eutrema salsugineum HOM05D007592 ORTHO05D004645 3.0e-26 122.5 147 51.0
CANSAT35G0055 Cannabis sativa HOM05D007592 ORTHO05D004645 4.7e-24 115.2 148 48.0
Ciclev10016612m.g Citrus clementina HOM05D007592 ORTHO05D004645 4.7e-24 115.2 134 47.0
CANSAT64G2577 Cannabis sativa HOM05D007592 ORTHO05D004645 1.2e-22 110.5 143 50.3
DCAR_001490 Daucus carota HOM05D007592 ORTHO05D004645 1.5e-22 110.2 137 45.3
Oeu029633.1 Olea europaea HOM05D007592 ORTHO05D004645 1.5e-22 110.2 134 50.0
Atru.chr10.1040 Acer truncatum HOM05D007592 ORTHO05D004645 5.8e-22 108.2 141 44.0
Ciclev10027215m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.7e-21 106.7 129 49.6
CANSAT11G1366 Cannabis sativa HOM05D007592 ORTHO05D004645 2.2e-21 106.3 108 56.5
Atru.chr8.1335 Acer truncatum HOM05D007592 ORTHO05D004645 1.9e-20 103.2 126 48.4
CANSAT25G1186 Cannabis sativa HOM05D007592 ORTHO05D004645 1.9e-20 103.2 100 55.0
Atru.chr13.1766 Acer truncatum HOM05D007592 ORTHO05D004645 7.0e-20 101.3 152 42.8
Atru.chr11.1181 Acer truncatum HOM05D000214 ORTHO05D000131 3.5e-19 99.0 75 66.7
Ciclev10003950m.g Citrus clementina HOM05D007592 ORTHO05D004645 3.5e-19 99.0 69 65.2
Migut.A00242 Erythranthe guttata HOM05D007592 ORTHO05D004645 2.3e-18 96.3 157 40.1
BraA06t26442Z Brassica rapa HOM05D007592 ORTHO05D004645 3.9e-18 95.5 82 59.8
CANSAT64G0010 Cannabis sativa HOM05D007592 ORTHO05D004645 5.0e-18 95.1 88 56.8
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 6.6e-18 94.7 144 41.7
AL6G36070 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.1e-17 94.0 135 43.0
Ciclev10023446m.g Citrus clementina HOM05D007592 ORTHO05D004645 5.6e-17 91.7 129 43.4
Manes.04G041320 Manihot esculenta HOM05D007592 ORTHO05D004645 1.6e-16 90.1 144 43.1
Manes.03G086209 Manihot esculenta HOM05D007592 ORTHO05D004645 2.1e-16 89.7 82 53.7
Manes.14G157656 Manihot esculenta HOM05D007743 ORTHO05D010219 2.8e-16 89.4 82 52.4
CARHR029530 Cardamine hirsuta HOM05D007592 ORTHO05D004645 3.6e-16 89.0 144 36.1
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 4.7e-16 88.6 77 55.8
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 1.8e-15 86.7 144 42.4
Ciclev10003711m.g Citrus clementina HOM05D007592 ORTHO05D004645 2.3e-15 86.3 114 44.7
Manes.15G155750 Manihot esculenta HOM05D007743 ORTHO05D010219 2.3e-15 86.3 70 58.6
BolC1t03512H Brassica oleracea HOM05D007592 ORTHO05D014827 3.1e-15 85.9 93 53.8
Atru.chr5.2435 Acer truncatum HOM05D007743 ORTHO05D004645 6.8e-15 84.7 72 58.3
Atru.chr3.1033 Acer truncatum HOM05D007592 ORTHO05D004645 1.2e-14 84.0 129 39.5
AL1G54420 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.2e-14 84.0 104 45.2
CARHR258700 Cardamine hirsuta HOM05D007592 ORTHO05D004645 4.4e-14 82.0 141 34.8
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 5.8e-14 81.6 138 44.2
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 9.8e-14 80.9 139 38.8
Atru.chr10.191 Acer truncatum HOM05D007592 ORTHO05D004645 2.9e-13 79.3 106 42.5
BcaB01g01748 Brassica carinata HOM05D007743 ORTHO05D004645 4.9e-13 78.6 73 49.3
Manes.09G090928 Manihot esculenta HOM05D007592 ORTHO05D004645 6.4e-13 78.2 148 33.8
BcaB06g28792 Brassica carinata HOM05D007743 ORTHO05D004645 1.1e-12 77.4 82 43.9
Atru.chr12.1217 Acer truncatum HOM05D007592 ORTHO05D004645 1.4e-12 77.0 97 44.3
BcaC08g43897 Brassica carinata HOM05D007743 ORTHO05D004645 1.4e-12 77.0 80 45.0
BcaB07g33427 Brassica carinata HOM05D007743 ORTHO05D004645 1.9e-12 76.6 107 40.2
Ciclev10023655m.g Citrus clementina HOM05D007592 ORTHO05D004645 1.9e-12 76.6 92 43.5
C06p19270 Brassica napus HOM05D007592 ORTHO05D033492 3.2e-12 75.9 147 37.4
AT2G13760 Arabidopsis thaliana HOM05D007592 ORTHO05D004645 4.1e-12 75.5 97 48.5
BcaB04g19609 Brassica carinata HOM05D007743 ORTHO05D004645 5.4e-12 75.1 82 42.7
AL9U10800 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 7.1e-12 74.7 99 45.5
Atru.chr3.1639 Acer truncatum HOM05D007592 ORTHO05D004645 9.2e-12 74.3 99 41.4
BcaC01g02275 Brassica carinata HOM05D007743 ORTHO05D004645 9.2e-12 74.3 116 37.1
BcaB08g34421 Brassica carinata HOM05D007743 ORTHO05D004645 1.2e-11 73.9 88 38.6
Oeu019651.1 Olea europaea HOM05D007592 ORTHO05D004645 2.1e-11 73.2 138 38.4
Atru.chr11.101 Acer truncatum HOM05D007592 ORTHO05D004645 3.5e-11 72.4 141 35.5
Atru.chr8.1611 Acer truncatum HOM05D007592 ORTHO05D004645 6.0e-11 71.6 125 37.6
CANSAT11G0484 Cannabis sativa HOM05D007743 ORTHO05D004645 6.0e-11 71.6 140 35.7
Carub.0004s0678 Capsella rubella HOM05D007592 ORTHO05D004645 7.8e-11 71.2 138 33.3
Thhalv10022202m.g Eutrema salsugineum HOM05D007592 ORTHO05D004645 1.0e-10 70.9 58 62.1
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.3e-10 70.5 158 33.5
Atru.chr6.1370 Acer truncatum HOM05D007592 ORTHO05D004645 1.7e-10 70.1 97 40.2
BcaB02g10737 Brassica carinata HOM05D007743 ORTHO05D004645 1.7e-10 70.1 78 43.6
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.3e-10 69.7 159 33.3
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.0e-10 69.3 159 33.3
FAN08G2536 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.0e-10 69.3 159 33.3
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.0e-10 69.3 159 33.3
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 3.0e-10 69.3 159 33.3
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 3.9e-10 68.9 156 33.3
AL5G14150 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 6.6e-10 68.2 61 50.8
Rhsim01G0124200 Rhododendron simsii HOM05D000422 ORTHO05D004645 6.6e-10 68.2 73 52.1
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 8.6e-10 67.8 159 32.7
BcaNung00662 Brassica carinata HOM05D007592 ORTHO05D004645 1.1e-09 67.4 69 58.0
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.1e-09 67.4 159 32.7
CARHR184030 Cardamine hirsuta HOM05D007592 ORTHO05D004645 1.5e-09 67.0 104 37.5
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 1.5e-09 67.0 158 32.9
AL8G44460 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 1.9e-09 66.6 116 38.8
CARHR180790 Cardamine hirsuta HOM05D007592 ORTHO05D004645 4.3e-09 65.5 105 40.0
Atru.chr4.1791 Acer truncatum HOM05D007592 ORTHO05D004645 5.6e-09 65.1 95 44.2
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 9.5e-09 64.3 160 32.5
Manes.03G096216 Manihot esculenta HOM05D007592 ORTHO05D004645 2.8e-08 62.8 144 34.7
AL1G39540 Arabidopsis lyrata HOM05D007592 ORTHO05D004645 3.6e-08 62.4 61 44.3
FAN04G2392 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.2e-07 58.5 79 43.0
CSS0002566 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-07 58.2 148 31.8
CSS0010296 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-07 58.2 148 31.8
CSS0012194 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-07 58.2 148 31.8
CSS0049636 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-07 58.2 115 33.0
Oeu053537.1 Olea europaea HOM05D007592 ORTHO05D004645 6.8e-07 58.2 106 37.7
CSS0001664 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.9e-07 57.8 115 33.0
CSS0006860 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.9e-07 57.8 148 31.8
CSS0033894 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.4 146 32.2
CSS0041981 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-06 57.4 146 32.2
CSS0010386 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-06 55.8 148 31.1
CSS0034959 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-06 55.8 148 31.8
CSS0008814 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.4e-06 55.5 146 32.9
CSS0008946 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.4e-06 55.5 146 32.9
CSS0011061 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.4e-06 55.5 146 32.9
CSS0023642 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.4e-06 55.5 146 32.9
CSS0041053 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.4e-06 55.5 146 32.9


User provided reference genes

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