Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p29370 Brassica napus HOM05D012238 ORTHO05D016114 2.0e-52 208.8 102 100.0
C01p28650 Brassica napus HOM05D012238 ORTHO05D016114 2.5e-50 201.8 102 97.1
C02p31510 Brassica napus HOM05D012238 ORTHO05D016114 2.5e-50 201.8 102 96.1
BolC2t09437H Brassica oleracea HOM05D012238 ORTHO05D016114 1.4e-29 132.9 68 94.1
BolC1t02792H Brassica oleracea HOM05D012238 ORTHO05D016114 5.9e-28 127.5 64 96.9
A02p40270 Brassica napus HOM05D012238 ORTHO05D016114 1.0e-27 126.7 64 95.3
BraA02t08996Z Brassica rapa HOM05D012238 ORTHO05D016114 1.0e-27 126.7 64 95.3
C09p42890 Brassica napus HOM05D012238 ORTHO05D016114 1.9e-26 122.5 66 89.4
BolC9t57159H Brassica oleracea HOM05D012238 ORTHO05D016114 1.9e-26 122.5 66 89.4
BcaC04g20500 Brassica carinata HOM05D012238 ORTHO05D016114 3.0e-16 88.6 43 95.3
A03p35510 Brassica napus HOM05D012238 ORTHO05D016114 1.1e-13 80.1 41 92.7
BolC1t02791H Brassica oleracea HOM05D012238 ORTHO05D033840 2.4e-13 79.0 38 97.4
C03p20580 Brassica napus HOM05D001098 ORTHO05D012826 7.0e-13 77.4 81 53.1
BolC3t14466H Brassica oleracea HOM05D001098 ORTHO05D012826 7.0e-13 77.4 81 53.1
BraA02t08384Z Brassica rapa HOM05D012238 ORTHO05D033840 1.2e-09 66.6 38 81.6
BraA05t21070Z Brassica rapa HOM05D012238 ORTHO05D033840 1.1e-08 63.5 38 78.9
Hma1.2p1_0271F.1_g108730 Hydrangea macrophylla HOM05D001098 ORTHO05D002527 2.6e-07 58.9 67 43.3
AL7G15820 Arabidopsis lyrata HOM05D001098 ORTHO05D002527 5.8e-07 57.8 58 50.0
BcaNung06457 Brassica carinata HOM05D001098 ORTHO05D002527 5.8e-07 57.8 53 58.5
A08p21890 Brassica napus HOM05D001098 ORTHO05D002527 5.8e-07 57.8 53 58.5
BraA08t34142Z Brassica rapa HOM05D001098 ORTHO05D002527 5.8e-07 57.8 53 58.5
Atru.chr5.3569 Acer truncatum HOM05D001098 ORTHO05D002527 7.5e-07 57.4 61 47.5
BcaB03g12410 Brassica carinata HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
BcaNung02390 Brassica carinata HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
A01p03220 Brassica napus HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
A03p63540 Brassica napus HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
C01p03570 Brassica napus HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
C07p61120 Brassica napus HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
BolC1t00347H Brassica oleracea HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
BolC7t46536H Brassica oleracea HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
BraA01t00307Z Brassica rapa HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
BraA03t15424Z Brassica rapa HOM05D001098 ORTHO05D002527 7.5e-07 57.4 50 62.0
CsaV3_6G010050 Cucumis sativus L. HOM05D001098 ORTHO05D002527 7.5e-07 57.4 62 43.5
Lsat_1_v5_gn_8_120701 Lactuca sativa HOM05D001098 ORTHO05D002527 7.5e-07 57.4 52 57.7
Carub.0007s0496 Capsella rubella HOM05D001098 ORTHO05D002527 9.8e-07 57.0 50 60.0
Ciclev10028748m.g Citrus clementina HOM05D001098 ORTHO05D002527 9.8e-07 57.0 61 47.5
Thhalv10025582m.g Eutrema salsugineum HOM05D001098 ORTHO05D002527 9.8e-07 57.0 50 60.0
MD05G1141000 Malus domestica HOM05D001098 ORTHO05D002527 9.8e-07 57.0 61 45.9
Nn6g31647 Nelumbo nucifera HOM05D001098 ORTHO05D002527 9.8e-07 57.0 61 41.0
Prupe.8G181000 Prunus persica HOM05D001098 ORTHO05D002527 9.8e-07 57.0 61 47.5
Dinv41864 Davidia involucrata HOM05D001098 ORTHO05D002527 1.3e-06 56.6 61 45.9
Sabra16G0108800 Salix brachista HOM05D000241 ORTHO05D001001 1.3e-06 56.6 77 40.3
BcaC01g00493 Brassica carinata HOM05D001098 ORTHO05D002527 1.7e-06 56.2 52 57.7
C03p80640 Brassica napus HOM05D001098 ORTHO05D002527 1.7e-06 56.2 52 57.7
BolC3t20307H Brassica oleracea HOM05D001098 ORTHO05D002527 1.7e-06 56.2 52 57.7
ClCG02G010830 Citrullus lanatus HOM05D001098 ORTHO05D002527 1.7e-06 56.2 62 41.9
MELO3C013485.2 Cucumis melo HOM05D001098 ORTHO05D002527 1.7e-06 56.2 62 41.9
Gohir.A04G111700 Gossypium hirsutum HOM05D001098 ORTHO05D002527 1.7e-06 56.2 49 57.1
Sed0023457 Sechium edule HOM05D001098 ORTHO05D002527 1.7e-06 56.2 62 41.9
Actinidia17990 Actinidia chinensis HOM05D001098 ORTHO05D002527 2.2e-06 55.8 61 45.9
Actinidia20579 Actinidia chinensis HOM05D001098 ORTHO05D002527 2.2e-06 55.8 61 45.9
Aa31sc18G70 Aethionema arabicum HOM05D001098 ORTHO05D002527 2.2e-06 55.8 50 58.0
CARHR243660 Cardamine hirsuta HOM05D001098 ORTHO05D002527 2.2e-06 55.8 50 58.0
Eucgr.I01538 Eucalyptus grandis HOM05D001098 ORTHO05D002527 2.2e-06 55.8 62 43.5
Lj9A408T81 Lonicera japonica HOM05D001098 ORTHO05D002527 2.2e-06 55.8 61 45.9
MBI01_g17242_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 2.2e-06 55.8 61 44.3
MBI01_g32424_MAGBIO Magnolia biondii HOM05D001098 ORTHO05D002527 2.2e-06 55.8 61 44.3
Sp7g33130 Schrenkiella parvula HOM05D001098 ORTHO05D002527 2.2e-06 55.8 50 58.0
Sed0023927 Sechium edule HOM05D001098 ORTHO05D002527 2.2e-06 55.8 62 40.3
GSVIVG01023864001 Vitis vinifera HOM05D001098 ORTHO05D002527 2.2e-06 55.8 61 45.9
COL.COLO4_34319 Corchorus olitorius HOM05D001098 ORTHO05D002527 2.9e-06 55.5 61 44.3
DCAR_006385 Daucus carota HOM05D001098 ORTHO05D002527 2.9e-06 55.5 61 44.3
Duzib132G1111 Durio zibethinus HOM05D001098 ORTHO05D002527 2.9e-06 55.5 61 44.3
Duzib248G0955 Durio zibethinus HOM05D001098 ORTHO05D002527 2.9e-06 55.5 61 44.3
Gohir.A13G064400 Gossypium hirsutum HOM05D001098 ORTHO05D002527 2.9e-06 55.5 61 44.3
HanXRQChr16g0515181 Helianthus annuus HOM05D001098 ORTHO05D002527 2.9e-06 55.5 56 50.0
Thecc.02G147100 Theobroma cacao HOM05D001098 ORTHO05D002527 2.9e-06 55.5 61 44.3
TPR.G18630 Trifolium pratense HOM05D001098 ORTHO05D002527 2.9e-06 55.5 61 42.6
CSS0007326 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D002527 3.7e-06 55.1 61 44.3
Cc09_g10880 Coffea canephora HOM05D001098 ORTHO05D002527 3.7e-06 55.1 62 41.9
Migut.B00005 Erythranthe guttata HOM05D001098 ORTHO05D002527 3.7e-06 55.1 61 42.6
Hma1.2p1_0032F.1_g018710 Hydrangea macrophylla HOM05D001098 ORTHO05D002527 3.7e-06 55.1 61 44.3
MD11G1242300 Malus domestica HOM05D001098 ORTHO05D002527 3.7e-06 55.1 61 42.6
Oeu012219.1 Olea europaea HOM05D001098 ORTHO05D002527 3.7e-06 55.1 61 42.6
Oeu050440.1 Olea europaea HOM05D001098 ORTHO05D002527 3.7e-06 55.1 61 42.6
PSO541G0403 Papaver somniferum HOM05D001098 ORTHO05D002527 3.7e-06 55.1 61 42.6
TAR376G1176 Trochodendron aralioides HOM05D003539 ORTHO05D004111 3.7e-06 55.1 61 44.3
ATR0057G016 Amborella trichopoda HOM05D001098 ORTHO05D002527 4.9e-06 54.7 61 45.9
SalBow1G7648 Salvia bowleyana HOM05D001098 ORTHO05D002527 4.9e-06 54.7 61 42.6
SalBow7G2674 Salvia bowleyana HOM05D001098 ORTHO05D002527 4.9e-06 54.7 61 42.6
Aqoxy3G04159 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 6.4e-06 54.3 61 42.6
Manes.18G113200 Manihot esculenta HOM05D001098 ORTHO05D002527 6.4e-06 54.3 61 44.3
TWI75G1677 Tripterygium wilfordii HOM05D001098 ORTHO05D002527 6.4e-06 54.3 61 44.3
TWI79G1444 Tripterygium wilfordii HOM05D001098 ORTHO05D002527 6.4e-06 54.3 61 44.3
Aqoxy2G01309 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 8.3e-06 53.9 61 42.6
Aqoxy6G01547 Aquilegia oxysepala HOM05D001098 ORTHO05D002527 8.3e-06 53.9 61 42.6
arahy.Tifrunner.gnm1.ann1.N1X7B2 Arachis hypogaea HOM05D001098 ORTHO05D002527 8.3e-06 53.9 63 38.1
MSTRG.16957 Avicennia marina HOM05D001098 ORTHO05D002527 8.3e-06 53.9 61 41.0
CSS0035199 Camellia sinensis var. sinensis HOM05D001098 ORTHO05D002527 8.3e-06 53.9 61 42.6
Ca_06505_v3 Cicer arietinum L. HOM05D001098 ORTHO05D002527 8.3e-06 53.9 61 42.6
ECA233G3688 Erigeron canadensis HOM05D001098 ORTHO05D002527 8.3e-06 53.9 56 50.0
Glyma.02G312000 Glycine max HOM05D001098 ORTHO05D002527 8.3e-06 53.9 61 42.6
Glyma.14G000600 Glycine max HOM05D001098 ORTHO05D002527 8.3e-06 53.9 61 42.6
Gorai.012G138800 Gossypium raimondii HOM05D001098 ORTHO05D002527 8.3e-06 53.9 49 55.1
PSO675G9097 Papaver somniferum HOM05D001098 ORTHO05D002527 8.3e-06 53.9 52 51.9
RcHm_v2.0_Chr6g0281071 Rosa chinensis HOM05D001098 ORTHO05D002527 8.3e-06 53.9 61 44.3
HPP92_015755 Vanilla planifolia HOM05D001098 ORTHO05D002527 8.3e-06 53.9 52 51.9
VMungo0647G1862 Vigna mungo HOM05D001098 ORTHO05D002527 8.3e-06 53.9 61 41.0


User provided reference genes

Program Settings