Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p27900 Brassica napus HOM05D000161 ORTHO05D042814 1.2e-40 169.5 90 100.0
BolC4t24334H Brassica oleracea HOM05D000161 ORTHO05D042814 1.2e-40 169.5 90 100.0
BcaC06g31880 Brassica carinata HOM05D000161 ORTHO05D000111 2.5e-14 82.0 62 67.7
BcaB08g34472 Brassica carinata HOM05D000161 ORTHO05D000111 3.1e-12 75.1 62 61.3
BcaC06g31879 Brassica carinata HOM05D000161 ORTHO05D000111 3.1e-12 75.1 61 62.3
BraA03t13562Z Brassica rapa HOM05D000161 ORTHO05D000111 3.1e-12 75.1 62 61.3
BcaC01g03201 Brassica carinata HOM05D000161 ORTHO05D000111 4.0e-12 74.7 62 61.3
C03p54760 Brassica napus HOM05D000161 ORTHO05D000111 4.0e-12 74.7 62 61.3
BolC3t17768H Brassica oleracea HOM05D000161 ORTHO05D000111 4.0e-12 74.7 62 61.3
BcaC02g10446 Brassica carinata HOM05D000161 ORTHO05D000111 6.9e-12 73.9 76 51.3
A03p44330 Brassica napus HOM05D000161 ORTHO05D000111 6.9e-12 73.9 62 59.7
BcaC02g10512 Brassica carinata HOM05D000161 ORTHO05D000111 1.5e-11 72.8 61 59.0
C04p28060 Brassica napus HOM05D000161 ORTHO05D000111 1.5e-11 72.8 61 59.0
C04p28840 Brassica napus HOM05D000161 ORTHO05D000111 1.5e-11 72.8 76 50.0
BolC4t24350H Brassica oleracea HOM05D000161 ORTHO05D000111 1.5e-11 72.8 61 59.0
AT1G62085 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 7.6e-11 70.5 61 60.7
BcaB07g31298 Brassica carinata HOM05D000161 ORTHO05D000111 7.6e-11 70.5 62 56.5
A09p16570 Brassica napus HOM05D000161 ORTHO05D000111 9.9e-11 70.1 66 56.1
Sp7g03520 Schrenkiella parvula HOM05D000161 ORTHO05D000111 9.9e-11 70.1 61 57.4
AT1G62010 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.7e-10 69.3 65 56.9
CARHR049990 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.7e-10 69.3 62 53.2
Thhalv10028140m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.7e-10 69.3 59 55.9
AL2G13950 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.2e-10 68.9 66 54.5
BcaC04g22763 Brassica carinata HOM05D000161 ORTHO05D000111 2.9e-10 68.6 62 53.2
C09p15560 Brassica napus HOM05D000161 ORTHO05D000111 2.9e-10 68.6 62 53.2
CARHR050070 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.9e-10 68.6 55 60.0
Carub.0002s0295 Capsella rubella HOM05D000161 ORTHO05D000111 3.8e-10 68.2 61 55.7
BraA09t36958Z Brassica rapa HOM05D000161 ORTHO05D000111 4.9e-10 67.8 59 54.2
Carub.0002s0308 Capsella rubella HOM05D000161 ORTHO05D000111 4.9e-10 67.8 66 51.5
AL2G14080 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 6.4e-10 67.4 66 56.1
AT1G62150 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 6.4e-10 67.4 62 54.8
BcaB07g31299 Brassica carinata HOM05D000161 ORTHO05D000111 6.4e-10 67.4 61 54.1
AL2G13930 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 8.4e-10 67.0 75 54.7
AL2G13990 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 8.4e-10 67.0 61 57.4
Sp2g02100 Schrenkiella parvula HOM05D000161 ORTHO05D000111 8.4e-10 67.0 59 57.6
AL2G14060 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.1e-09 66.6 64 54.7
BcaC06g31903 Brassica carinata HOM05D000161 ORTHO05D000111 1.1e-09 66.6 61 54.1
A09p16550 Brassica napus HOM05D000161 ORTHO05D000111 1.4e-09 66.2 61 52.5
BraA09t37293Z Brassica rapa HOM05D000161 ORTHO05D000111 1.4e-09 66.2 61 52.5
CARHR050000 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.4e-09 66.2 61 55.7
Thhalv10023838m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.4e-09 66.2 61 52.5
Sp2g02580 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.4e-09 66.2 59 57.6
Thhalv10023911m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.9e-09 65.9 61 52.5
Sp2g02610 Schrenkiella parvula HOM05D000161 ORTHO05D000111 1.9e-09 65.9 65 56.9
AL2G13900 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.4e-09 65.5 61 55.7
AL2G14070 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.4e-09 65.5 60 53.3
AL2G21920 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.4e-09 65.5 66 50.0
BcaC02g10522 Brassica carinata HOM05D000161 ORTHO05D000111 2.4e-09 65.5 61 52.5
A03p67410 Brassica napus HOM05D000161 ORTHO05D000111 2.4e-09 65.5 61 52.5
A09p13120 Brassica napus HOM05D000161 ORTHO05D000111 2.4e-09 65.5 59 52.5
C04p27930 Brassica napus HOM05D000161 ORTHO05D000111 2.4e-09 65.5 61 52.5
BolC4t24337H Brassica oleracea HOM05D000161 ORTHO05D000111 2.4e-09 65.5 61 52.5
BraA01t02734Z Brassica rapa HOM05D000161 ORTHO05D000111 2.4e-09 65.5 61 52.5
CARHR050330 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.4e-09 65.5 55 56.4
AT1G61980 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 3.2e-09 65.1 65 52.3
BcaC04g22367 Brassica carinata HOM05D000161 ORTHO05D000111 4.2e-09 64.7 61 52.5
C09p20110 Brassica napus HOM05D000161 ORTHO05D000111 4.2e-09 64.7 61 52.5
BolC9t54920H Brassica oleracea HOM05D000161 ORTHO05D000111 4.2e-09 64.7 61 52.5
Carub.0002s0311 Capsella rubella HOM05D000161 ORTHO05D000111 4.2e-09 64.7 69 53.6
Thhalv10024039m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.2e-09 64.7 62 51.6
AL2G13820 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 5.4e-09 64.3 66 53.0
BcaB07g31330 Brassica carinata HOM05D000161 ORTHO05D000111 7.1e-09 63.9 61 52.5
AT1G62120 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 9.3e-09 63.5 66 50.0
A09p16240 Brassica napus HOM05D000161 ORTHO05D000111 1.2e-08 63.2 59 50.8
BraA09t37261Z Brassica rapa HOM05D000161 ORTHO05D000111 1.2e-08 63.2 59 50.8
Thhalv10023461m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.2e-08 63.2 61 55.7
AL2G13770 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.6e-08 62.8 62 51.6
AT1G61970 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 1.6e-08 62.8 61 55.7
AT1G62110 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 2.1e-08 62.4 62 54.8
AL2G13790 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.7e-08 62.0 56 53.6
AL8G20000 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.7e-08 62.0 62 51.6
Thhalv10023467m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.7e-08 62.0 62 50.0
Thhalv10023472m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.7e-08 62.0 63 52.4
AL2G13390 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 3.5e-08 61.6 61 52.5
BcaC06g31876 Brassica carinata HOM05D000161 ORTHO05D000111 3.5e-08 61.6 61 49.2
Carub.0002s0249 Capsella rubella HOM05D000161 ORTHO05D000111 3.5e-08 61.6 69 49.3
Thhalv10023457m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.5e-08 61.6 61 52.5
CARHR049980 Cardamine hirsuta HOM05D000161 ORTHO05D000111 4.6e-08 61.2 59 52.5
CARHR050220 Cardamine hirsuta HOM05D000161 ORTHO05D000111 4.6e-08 61.2 54 55.6
Thhalv10023445m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.6e-08 61.2 61 52.5
Thhalv10024167m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 4.6e-08 61.2 56 50.0
BcaC04g22407 Brassica carinata HOM05D000161 ORTHO05D000111 6.0e-08 60.8 59 49.2
C09p19700 Brassica napus HOM05D000161 ORTHO05D000111 6.0e-08 60.8 59 49.2
BolC9t54872H Brassica oleracea HOM05D000161 ORTHO05D000111 6.0e-08 60.8 59 49.2
Carub.0002s0306 Capsella rubella HOM05D000161 ORTHO05D000111 6.0e-08 60.8 60 51.7
Thhalv10019750m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 6.0e-08 60.8 59 49.2
A09p16560 Brassica napus HOM05D000161 ORTHO05D000111 7.8e-08 60.5 55 58.2
Carub.0002s0309 Capsella rubella HOM05D000161 ORTHO05D000111 7.8e-08 60.5 65 56.9
CARHR049970 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.0e-07 60.1 62 48.4
Thhalv10024041m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.0e-07 60.1 62 54.8
AL2G14100 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 1.3e-07 59.7 61 45.9
C01p26680 Brassica napus HOM05D000161 ORTHO05D014467 1.3e-07 59.7 62 48.4
Carub.0002s0294 Capsella rubella HOM05D000161 ORTHO05D000111 1.3e-07 59.7 59 52.5
CARHR050160 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.3e-07 59.7 67 50.7
CARHR155600 Cardamine hirsuta HOM05D000161 ORTHO05D000111 1.3e-07 59.7 62 48.4
Thhalv10024090m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 1.7e-07 59.3 61 47.5
AL2G14090 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 2.3e-07 58.9 64 50.0
CARHR189630 Cardamine hirsuta HOM05D000161 ORTHO05D000111 2.3e-07 58.9 59 54.2
Sp2g02560 Schrenkiella parvula HOM05D000161 ORTHO05D000111 2.3e-07 58.9 66 53.0
Thhalv10023470m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.0e-07 58.5 59 47.5
Thhalv10023505m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 3.0e-07 58.5 64 48.4
BcaC04g22370 Brassica carinata HOM05D000161 ORTHO05D000111 3.9e-07 58.2 61 50.8
C09p20080 Brassica napus HOM05D000161 ORTHO05D000111 3.9e-07 58.2 61 50.8
BolC9t54916H Brassica oleracea HOM05D000161 ORTHO05D000111 3.9e-07 58.2 61 50.8
Carub.0005s1597 Capsella rubella HOM05D000161 ORTHO05D000111 3.9e-07 58.2 62 48.4
Sp2g02590 Schrenkiella parvula HOM05D000161 ORTHO05D000111 5.1e-07 57.8 64 51.6
AT1G61960 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 6.6e-07 57.4 63 47.6
Carub.0002s0300 Capsella rubella HOM05D000161 ORTHO05D000111 6.6e-07 57.4 67 46.3
Carub.0005s1317 Capsella rubella HOM05D000161 ORTHO05D000111 6.6e-07 57.4 62 48.4
Sp2g02110 Schrenkiella parvula HOM05D000161 ORTHO05D000111 6.6e-07 57.4 61 49.2
Sp2g02550 Schrenkiella parvula HOM05D000161 ORTHO05D000111 8.7e-07 57.0 62 48.4
BraA09t37294Z Brassica rapa HOM05D000161 ORTHO05D000111 1.9e-06 55.8 56 48.2
BcaB07g31302 Brassica carinata HOM05D000161 ORTHO05D000111 2.5e-06 55.5 61 47.5
Thhalv10023447m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 2.5e-06 55.5 61 47.5
BcaB07g31296 Brassica carinata HOM05D000161 ORTHO05D000111 3.3e-06 55.1 56 48.2
A01p30830 Brassica napus HOM05D000161 ORTHO05D000111 3.3e-06 55.1 57 50.9
A09p16580 Brassica napus HOM05D000161 ORTHO05D000111 3.3e-06 55.1 56 46.4
Carub.0002s0291 Capsella rubella HOM05D000161 ORTHO05D000111 3.3e-06 55.1 62 43.5
Carub.0002s0310 Capsella rubella HOM05D000161 ORTHO05D000111 3.3e-06 55.1 63 49.2
Sp5g14790 Schrenkiella parvula HOM05D000161 ORTHO05D000111 3.3e-06 55.1 62 48.4
AL2G14030 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 4.3e-06 54.7 51 56.9
BraA01t03211Z Brassica rapa HOM05D000161 ORTHO05D000111 4.3e-06 54.7 57 50.9
AL5G44270 Arabidopsis lyrata HOM05D000144 ORTHO05D000111 5.6e-06 54.3 61 45.9
AT3G46950 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 5.6e-06 54.3 59 49.2
AL5G26170 Arabidopsis lyrata HOM05D000161 ORTHO05D000111 7.3e-06 53.9 61 49.2
AT5G23930 Arabidopsis thaliana HOM05D000161 ORTHO05D000111 7.3e-06 53.9 59 49.2
Thhalv10024025m.g Eutrema salsugineum HOM05D000161 ORTHO05D000111 7.3e-06 53.9 55 47.3
BcaC04g22364 Brassica carinata HOM05D000161 ORTHO05D000111 9.6e-06 53.5 56 44.6
C09p20120 Brassica napus HOM05D000161 ORTHO05D000111 9.6e-06 53.5 80 43.8
C09p20140 Brassica napus HOM05D000161 ORTHO05D000111 9.6e-06 53.5 56 44.6
CARHR050290 Cardamine hirsuta HOM05D000161 ORTHO05D000111 9.6e-06 53.5 63 46.0
CARHR050320 Cardamine hirsuta HOM05D000161 ORTHO05D000111 9.6e-06 53.5 63 44.4


User provided reference genes

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