Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p26320 Brassica napus HOM05D009590 ORTHO05D042950 5.9e-302 1040.0 514 100.0
BolC4t24175H Brassica oleracea HOM05D009590 ORTHO05D042950 5.9e-302 1040.0 514 100.0
C01p30030 Brassica napus HOM05D009590 ORTHO05D042627 2.0e-124 450.3 483 53.0
BolC1t02943H Brassica oleracea HOM05D009590 ORTHO05D042627 2.0e-124 450.3 483 53.0
BcaC02g10657 Brassica carinata HOM05D009590 ORTHO05D014118 1.0e-72 278.5 158 88.0
BolC1t03303H Brassica oleracea HOM05D009590 ORTHO05D014118 8.3e-70 268.9 401 41.9
C03p10840 Brassica napus HOM05D009590 ORTHO05D100504 4.0e-56 223.4 444 36.0
BcaC06g36732 Brassica carinata HOM05D009590 ORTHO05D014118 1.2e-55 221.9 136 79.4
BcaNung03499 Brassica carinata HOM05D009590 ORTHO05D020087 1.9e-53 214.5 353 38.2
C04p12300 Brassica napus HOM05D009590 ORTHO05D014118 3.6e-49 200.3 326 40.5
BcaB07g32585 Brassica carinata HOM05D009590 ORTHO05D014118 4.7e-49 199.9 136 66.2
BolC2t07403H Brassica oleracea HOM05D009590 ORTHO05D014118 3.4e-39 167.2 298 37.9
BolC4t22877H Brassica oleracea HOM05D009590 ORTHO05D014118 9.9e-39 165.6 136 58.8
BraA01t02898Z Brassica rapa HOM05D009590 ORTHO05D014118 1.6e-33 148.3 118 61.0
BcaC04g20540 Brassica carinata HOM05D009590 ORTHO05D014118 9.6e-26 122.5 89 58.4
C09p34070 Brassica napus HOM05D009590 ORTHO05D020087 3.1e-24 117.5 212 38.2
BolC9t56243H Brassica oleracea HOM05D009590 ORTHO05D020087 3.1e-24 117.5 212 38.2
A07p43380 Brassica napus HOM05D009117 ORTHO05D024074 1.9e-21 108.2 403 26.3
C09p42350 Brassica napus HOM05D009117 ORTHO05D000013 5.5e-21 106.7 66 74.2
BolC9t57114H Brassica oleracea HOM05D009117 ORTHO05D000013 5.5e-21 106.7 66 74.2
C02p28440 Brassica napus HOM05D009117 ORTHO05D012204 3.5e-20 104.0 356 23.0
C07p19280 Brassica napus HOM05D009117 ORTHO05D012204 1.0e-19 102.4 356 22.8
A09p17260 Brassica napus HOM05D009117 ORTHO05D012204 1.3e-19 102.1 355 22.5
C02p27840 Brassica napus HOM05D009117 ORTHO05D012204 1.3e-19 102.1 356 22.8
A01p27590 Brassica napus HOM05D009590 ORTHO05D014118 2.3e-19 101.3 119 46.2
A02p20020 Brassica napus HOM05D009117 ORTHO05D012204 2.3e-19 101.3 355 22.5
BolC1t02526H Brassica oleracea HOM05D009117 ORTHO05D012204 5.1e-19 100.1 356 22.8
Sp6g09970 Schrenkiella parvula HOM05D009590 ORTHO05D014118 8.7e-19 99.4 86 53.5
C01p25760 Brassica napus HOM05D009117 ORTHO05D012204 1.9e-18 98.2 356 22.5
BcaB05g23366 Brassica carinata HOM05D009117 ORTHO05D012204 5.6e-18 96.7 142 37.3
BcaB05g23704 Brassica carinata HOM05D009117 ORTHO05D012204 5.6e-18 96.7 314 25.5
BolC7t41869H Brassica oleracea HOM05D009117 ORTHO05D012204 5.6e-18 96.7 92 47.8
BolC3t21359H Brassica oleracea HOM05D009117 ORTHO05D012204 2.1e-17 94.7 107 42.1
A10p33170 Brassica napus HOM05D009117 ORTHO05D012204 2.8e-17 94.4 63 61.9
BolC2t08829H Brassica oleracea HOM05D009117 ORTHO05D012204 2.8e-17 94.4 67 58.2
BraA01t02653Z Brassica rapa HOM05D009117 ORTHO05D012204 3.7e-17 94.0 356 22.2
Sp5g15830 Schrenkiella parvula HOM05D001959 ORTHO05D001955 4.8e-17 93.6 113 46.0
A03p68140 Brassica napus HOM05D009117 ORTHO05D012204 1.1e-16 92.4 356 22.2
BolC4t26055H Brassica oleracea HOM05D025516 ORTHO05D012204 1.4e-16 92.0 69 55.1
BcaC04g21233 Brassica carinata HOM05D009590 ORTHO05D014118 2.4e-16 91.3 65 61.5
A09p37280 Brassica napus HOM05D009117 ORTHO05D012204 2.4e-16 91.3 107 40.2
C01p14290 Brassica napus HOM05D009117 ORTHO05D012204 2.4e-16 91.3 65 58.5
BolC2t08887H Brassica oleracea HOM05D009117 ORTHO05D012204 3.1e-16 90.9 107 40.2
C01p33570 Brassica napus HOM05D009590 ORTHO05D020087 4.9e-14 83.6 291 31.3
BcaC08g43055 Brassica carinata HOM05D009117 ORTHO05D024074 8.4e-14 82.8 162 29.0
BcaC03g16331 Brassica carinata HOM05D009590 ORTHO05D014118 1.4e-13 82.0 101 44.6
A01p27580 Brassica napus HOM05D009590 ORTHO05D020087 3.2e-13 80.9 239 29.3
BraA01t02897Z Brassica rapa HOM05D009590 ORTHO05D020087 7.9e-12 76.3 172 34.3
C06p10560 Brassica napus HOM05D000017 ORTHO05D000013 1.3e-11 75.5 70 47.1
BcaC03g14057 Brassica carinata HOM05D009590 ORTHO05D014118 5.7e-10 70.1 48 64.6
Sp1g39000 Schrenkiella parvula HOM05D009590 ORTHO05D372274 1.6e-09 68.6 47 63.8
Sp7g06860 Schrenkiella parvula HOM05D007915 ORTHO05D010216 4.8e-09 67.0 259 25.9
BcaB07g33410 Brassica carinata HOM05D001285 ORTHO05D000199 6.3e-09 66.6 94 38.3
BcaB02g11542 Brassica carinata HOM05D001285 ORTHO05D000199 8.2e-09 66.2 94 38.3
BolC3t15495H Brassica oleracea HOM05D000017 ORTHO05D000013 3.1e-08 64.3 68 44.1
BraA02t07765Z Brassica rapa HOM05D001285 ORTHO05D000199 4.1e-08 63.9 58 50.0
C02p41510 Brassica napus HOM05D033555 ORTHO05D032585 5.3e-08 63.5 81 46.9
BolC2t10168H Brassica oleracea HOM05D033555 ORTHO05D032585 5.3e-08 63.5 81 46.9
BcaB01g01138 Brassica carinata HOM05D001285 ORTHO05D000199 6.9e-08 63.2 47 59.6
BcaB07g33409 Brassica carinata HOM05D001285 ORTHO05D000199 9.0e-08 62.8 83 41.0
BcaC09g49778 Brassica carinata HOM05D001285 ORTHO05D017506 9.0e-08 62.8 94 37.2
A02p27370 Brassica napus HOM05D001285 ORTHO05D000199 9.0e-08 62.8 51 56.9
THA.LOC104801724 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 9.0e-08 62.8 90 33.3
THA.LOC104809156 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.5e-07 62.0 69 39.1
BcaC03g16332 Brassica carinata HOM05D033555 ORTHO05D032585 2.0e-07 61.6 90 44.4
THA.LOC104809906 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.0e-07 61.6 90 33.3
BcaB06g26759 Brassica carinata HOM05D001285 ORTHO05D000199 2.6e-07 61.2 94 36.2
BolC4t22876H Brassica oleracea HOM05D009590 ORTHO05D020087 2.6e-07 61.2 96 42.7
BraA05t21191Z Brassica rapa HOM05D001285 ORTHO05D000199 2.6e-07 61.2 94 36.2
BcaC03g16251 Brassica carinata HOM05D001285 ORTHO05D000199 1.3e-06 58.9 94 35.1
BolC2t10065H Brassica oleracea HOM05D001285 ORTHO05D000199 1.3e-06 58.9 94 35.1
Thhalv10002184m.g Eutrema salsugineum HOM05D000017 ORTHO05D000013 1.3e-06 58.9 69 36.2
C07p12180 Brassica napus HOM05D005627 ORTHO05D011976 1.7e-06 58.5 153 24.8
BcaB05g23429 Brassica carinata HOM05D001285 ORTHO05D000199 2.2e-06 58.2 94 35.1
BcaC02g10994 Brassica carinata HOM05D001285 ORTHO05D000199 2.2e-06 58.2 47 53.2
BcaB02g11091 Brassica carinata HOM05D001285 ORTHO05D000199 2.9e-06 57.8 94 37.2
C06p38200 Brassica napus HOM05D005627 ORTHO05D011976 5.0e-06 57.0 153 24.8
BcaC02g10995 Brassica carinata HOM05D001285 ORTHO05D000199 8.5e-06 56.2 118 31.4
C07p12150 Brassica napus HOM05D005627 ORTHO05D011976 8.5e-06 56.2 162 24.7


User provided reference genes

Program Settings