Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p26200 Brassica napus HOM05D000603 ORTHO05D027317 5.3e-69 264.2 134 100.0
BcaC03g16504 Brassica carinata HOM05D052281 ORTHO05D027317 2.9e-14 82.4 66 66.7
BcaC03g16436 Brassica carinata HOM05D000603 ORTHO05D027317 2.1e-09 66.2 54 68.5
BolC2t10304H Brassica oleracea HOM05D000603 ORTHO05D027317 2.1e-09 66.2 54 68.5
BcaC07g38665 Brassica carinata HOM05D000603 ORTHO05D002642 1.1e-08 63.9 51 68.6
A08p33470 Brassica napus HOM05D000603 ORTHO05D002642 1.1e-08 63.9 51 68.6
C08p14490 Brassica napus HOM05D000603 ORTHO05D002642 1.1e-08 63.9 51 68.6
BolC8t49098H Brassica oleracea HOM05D000603 ORTHO05D002642 1.1e-08 63.9 51 68.6
BraA08t35263Z Brassica rapa HOM05D000603 ORTHO05D002642 1.1e-08 63.9 51 68.6
AL1G22520 Arabidopsis lyrata HOM05D000603 ORTHO05D002642 1.4e-08 63.5 50 70.0
CARHR011710 Cardamine hirsuta HOM05D000603 ORTHO05D002642 1.4e-08 63.5 35 88.6
Sp1g10070 Schrenkiella parvula HOM05D000603 ORTHO05D002642 1.4e-08 63.5 35 88.6
A06p08070 Brassica napus HOM05D000603 ORTHO05D002642 1.8e-08 63.2 35 88.6
BraA06t24006Z Brassica rapa HOM05D000603 ORTHO05D002642 1.8e-08 63.2 35 88.6
BcaB03g13256 Brassica carinata HOM05D000603 ORTHO05D002642 2.4e-08 62.8 51 66.7
BcaC05g25021 Brassica carinata HOM05D000603 ORTHO05D002642 2.4e-08 62.8 34 91.2
AT1G11430 Arabidopsis thaliana HOM05D000603 ORTHO05D002642 3.1e-08 62.4 50 68.0
Carub.0001s1105 Capsella rubella HOM05D000603 ORTHO05D002642 4.0e-08 62.0 35 85.7
Thhalv10008605m.g Eutrema salsugineum HOM05D000603 ORTHO05D002642 4.0e-08 62.0 50 68.0
C05p09650 Brassica napus HOM05D000603 ORTHO05D002642 6.8e-08 61.2 33 90.9
BolC5t29706H Brassica oleracea HOM05D000603 ORTHO05D002642 6.8e-08 61.2 33 90.9
Aa31LG1G3290 Aethionema arabicum HOM05D000603 ORTHO05D002642 2.6e-07 59.3 50 66.0
THA.LOC104809532 Tarenaya hassleriana HOM05D000603 ORTHO05D002642 2.6e-07 59.3 50 60.0
C07p07590 Brassica napus HOM05D037101 ORTHO05D032690 7.6e-07 57.8 51 60.8
BcaC06g36122 Brassica carinata HOM05D037101 ORTHO05D032690 9.9e-07 57.4 50 62.0
BolC7t41180H Brassica oleracea HOM05D037101 ORTHO05D032690 9.9e-07 57.4 50 62.0
Gorai.004G028600 Gossypium raimondii HOM05D000603 ORTHO05D002642 2.2e-06 56.2 56 58.9
Aa31LG2G9180 Aethionema arabicum HOM05D000603 ORTHO05D002642 2.9e-06 55.8 42 64.3
Gohir.A08G020400 Gossypium hirsutum HOM05D000603 ORTHO05D002642 3.8e-06 55.5 41 70.7
Gohir.D08G031000 Gossypium hirsutum HOM05D000603 ORTHO05D002642 6.4e-06 54.7 56 57.1


User provided reference genes

Program Settings