Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 2.5e-56 221.9 109 100.0
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 2.4e-51 205.3 104 97.1
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 6.7e-38 160.6 112 75.0
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 2.6e-37 158.7 110 75.5
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 4.4e-37 157.9 112 74.1
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 7.5e-37 157.1 110 75.5
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 9.7e-37 156.8 110 75.5
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 2.2e-36 155.6 110 74.5
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 8.2e-36 153.7 116 69.0
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.1e-35 153.3 110 73.6
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.2e-34 149.8 110 71.8
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 1.2e-34 149.8 110 71.8
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 2.0e-34 149.1 96 81.2
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.3e-33 146.4 110 71.8
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 8.8e-30 133.7 111 63.1
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 2.2e-28 129.0 101 69.3
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.8e-27 125.9 110 60.9
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 2.4e-27 125.6 114 56.1
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 3.1e-27 125.2 110 60.0
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 9.1e-27 123.6 110 58.2
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 2.7e-26 122.1 105 61.9
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.5e-26 121.7 120 55.8
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.5e-26 121.7 120 55.8
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 4.5e-26 121.3 114 57.9
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 4.5e-26 121.3 110 57.3
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 7.7e-26 120.6 110 57.3
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.0e-25 120.2 110 57.3
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 1.0e-25 120.2 104 61.5
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 1.3e-25 119.8 110 57.3
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 2.3e-25 119.0 105 57.1
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 2.3e-25 119.0 110 57.3
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 2.9e-25 118.6 107 57.9
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 2.9e-25 118.6 110 56.4
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 2.9e-25 118.6 105 58.1
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 3.8e-25 118.2 104 59.6
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.8e-25 118.2 108 60.2
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 5.0e-25 117.9 111 57.7
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 5.0e-25 117.9 112 56.2
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 5.0e-25 117.9 112 56.2
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 6.5e-25 117.5 110 56.4
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 8.6e-25 117.1 110 57.3
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 8.6e-25 117.1 104 60.6
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 1.1e-24 116.7 110 55.5
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.5e-24 116.3 110 56.4
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 2.5e-24 115.5 110 55.5
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.5e-24 115.5 85 68.2
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 3.3e-24 115.2 105 56.2
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 3.3e-24 115.2 111 55.0
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 4.2e-24 114.8 104 59.6
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 5.5e-24 114.4 114 56.1
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 9.5e-24 113.6 85 65.9
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 9.5e-24 113.6 105 56.2
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 9.5e-24 113.6 84 67.9
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.2e-23 113.2 111 55.9
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.2e-23 113.2 114 51.8
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 1.2e-23 113.2 114 53.5
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 1.6e-23 112.8 110 55.5
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 2.8e-23 112.1 120 52.5
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 2.8e-23 112.1 106 56.6
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 3.6e-23 111.7 110 53.6
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 4.7e-23 111.3 110 54.5
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 2.3e-22 109.0 110 52.7
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 5.2e-22 107.8 114 50.0
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 6.8e-22 107.5 110 51.8
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 6.8e-22 107.5 110 52.7
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 8.9e-22 107.1 114 49.1
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.2e-21 106.7 114 50.9
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 2.0e-21 105.9 110 50.9
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.4e-21 105.1 104 55.8
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 3.4e-21 105.1 110 50.9
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 4.4e-21 104.8 114 50.0
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 9.8e-21 103.6 114 48.2
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.7e-20 102.8 110 51.8
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.7e-20 102.8 110 50.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 2.2e-20 102.4 112 47.3
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 2.8e-20 102.1 110 50.0
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 2.8e-20 102.1 110 50.0
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 4.9e-20 101.3 107 49.5
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 4.9e-20 101.3 107 49.5
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 6.3e-20 100.9 101 54.5
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 8.3e-20 100.5 110 50.9
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 1.4e-19 99.8 109 52.3
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 1.4e-19 99.8 81 65.4
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 7.0e-19 97.4 105 55.2
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 9.2e-19 97.1 112 49.1
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 1.6e-18 96.3 100 53.0
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 1.6e-18 96.3 114 46.5
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.6e-18 96.3 84 57.1
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 2.0e-18 95.9 130 44.6
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 2.0e-18 95.9 107 51.4
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 2.7e-18 95.5 110 49.1
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.7e-17 92.8 88 58.0
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 5.0e-17 91.3 88 56.8
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 7.3e-16 87.4 127 40.9
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 1.6e-15 86.3 87 54.0
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 8.0e-15 84.0 110 41.8
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 5.4e-11 71.2 78 47.4
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 1.6e-10 69.7 85 42.4
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 3.5e-10 68.6 90 41.1
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 3.5e-10 68.6 43 65.1
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 6.0e-10 67.8 81 42.0
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 3.9e-09 65.1 50 56.0


User provided reference genes

Program Settings