Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p26040 Brassica napus HOM05D007901 ORTHO05D016734 3.3e-225 784.6 377 100.0
BolC4t24201H Brassica oleracea HOM05D007901 ORTHO05D016734 3.3e-225 784.6 377 100.0
BcaC02g10635 Brassica carinata HOM05D007901 ORTHO05D016734 2.3e-157 559.3 268 100.0
BraA09t38123Z Brassica rapa HOM05D007901 ORTHO05D016734 3.3e-148 528.9 297 85.2
BcaB04g20260 Brassica carinata HOM05D007901 ORTHO05D016734 1.0e-141 507.3 307 78.2
BcaC06g31809 Brassica carinata HOM05D007901 ORTHO05D016734 2.9e-128 462.6 269 83.3
BcaB05g23805 Brassica carinata HOM05D007901 ORTHO05D016734 4.9e-96 355.5 223 78.5
C05p51210 Brassica napus HOM05D021084 ORTHO05D012782 2.9e-72 276.6 287 54.7
CARHR052680 Cardamine hirsuta HOM05D007901 ORTHO05D010902 5.5e-55 219.2 290 45.2
BcaB08g35962 Brassica carinata HOM05D007901 ORTHO05D010902 1.2e-54 218.0 284 45.8
BcaC04g20178 Brassica carinata HOM05D007901 ORTHO05D010902 1.2e-54 218.0 305 43.0
A10p13190 Brassica napus HOM05D007901 ORTHO05D010902 6.1e-54 215.7 305 42.3
BolC9t57581H Brassica oleracea HOM05D007901 ORTHO05D010902 6.1e-54 215.7 304 42.8
BolC9t57543H Brassica oleracea HOM05D007901 ORTHO05D010902 8.0e-54 215.3 305 42.6
C09p47250 Brassica napus HOM05D007901 ORTHO05D010902 1.4e-53 214.5 304 42.4
C09p46950 Brassica napus HOM05D007901 ORTHO05D010902 1.8e-53 214.2 304 42.4
A10p13320 Brassica napus HOM05D007901 ORTHO05D010902 8.8e-53 211.8 305 41.6
A10p13180 Brassica napus HOM05D007901 ORTHO05D010902 2.6e-52 210.3 288 43.4
BraA10t43415Z Brassica rapa HOM05D007901 ORTHO05D010902 2.6e-52 210.3 288 43.4
BraA10t43416Z Brassica rapa HOM05D007901 ORTHO05D010902 2.6e-52 210.3 305 42.0
BraA10t43433Z Brassica rapa HOM05D007901 ORTHO05D010902 1.7e-51 207.6 305 41.3
A09p25480 Brassica napus HOM05D007901 ORTHO05D016734 3.7e-51 206.5 137 78.1
AT1G60280 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 7.7e-49 198.7 285 42.8
Carub.0002s0498 Capsella rubella HOM05D007901 ORTHO05D010902 1.3e-48 198.0 282 41.1
AL2G16360 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 3.8e-48 196.4 287 42.9
AL2G16550 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 8.5e-48 195.3 305 40.0
AL2G16320 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 1.9e-47 194.1 310 40.0
AT1G60300 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 4.2e-47 193.0 309 40.8
BcaB04g20243 Brassica carinata HOM05D007901 ORTHO05D010902 5.5e-47 192.6 311 40.8
Carub.0170s0002 Capsella rubella HOM05D007901 ORTHO05D010902 9.5e-47 191.8 294 39.8
Thhalv10024006m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 1.6e-46 191.0 382 35.9
Carub.0002s0497 Capsella rubella HOM05D007901 ORTHO05D010902 6.1e-46 189.1 296 39.5
C01p36710 Brassica napus HOM05D007901 ORTHO05D010902 2.3e-45 187.2 280 41.1
BolC1t03631H Brassica oleracea HOM05D007901 ORTHO05D010902 2.3e-45 187.2 280 41.1
AL2G16330 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 4.0e-45 186.4 293 41.3
BolC1t03653H Brassica oleracea HOM05D007901 ORTHO05D010902 4.0e-45 186.4 280 41.1
Sp2g04430 Schrenkiella parvula HOM05D007901 ORTHO05D010902 4.0e-45 186.4 286 42.3
Carub.0170s0003 Capsella rubella HOM05D007901 ORTHO05D010902 6.8e-45 185.7 280 41.4
A01p29180 Brassica napus HOM05D007901 ORTHO05D010902 1.2e-44 184.9 304 38.5
BraA01t03004Z Brassica rapa HOM05D007901 ORTHO05D010902 1.5e-44 184.5 280 39.3
AT1G60350 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 5.7e-44 182.6 287 40.8
Carub.0002s0495 Capsella rubella HOM05D007901 ORTHO05D010902 2.8e-43 180.3 284 40.1
AT1G60380 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 1.8e-42 177.6 282 39.7
BcaB04g20261 Brassica carinata HOM05D007901 ORTHO05D010902 4.1e-42 176.4 308 39.6
BraA01t02977Z Brassica rapa HOM05D007901 ORTHO05D010902 8.6e-40 168.7 233 41.2
AT1G60340 Arabidopsis thaliana HOM05D007901 ORTHO05D010902 2.8e-38 163.7 258 41.9
BcaC09g49444 Brassica carinata HOM05D007901 ORTHO05D010902 4.0e-37 159.8 280 37.5
BcaC04g20143 Brassica carinata HOM05D007901 ORTHO05D010902 2.0e-36 157.5 254 41.7
Thhalv10023723m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 3.4e-36 156.8 155 49.7
BcaB01g01779 Brassica carinata HOM05D007901 ORTHO05D016734 5.7e-36 156.0 106 75.5
C01p36960 Brassica napus HOM05D007901 ORTHO05D010902 9.8e-36 155.2 280 37.1
AL2G16340 Arabidopsis lyrata HOM05D007901 ORTHO05D010902 1.3e-35 154.8 280 36.1
Thhalv10023876m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 2.2e-35 154.1 124 61.3
BraA01t03070Z Brassica rapa HOM05D007901 ORTHO05D012782 2.9e-35 153.7 161 52.8
BcaC09g49391 Brassica carinata HOM05D007901 ORTHO05D012782 4.1e-34 149.8 161 52.2
C01p37150 Brassica napus HOM05D007901 ORTHO05D012782 4.1e-34 149.8 161 52.2
BcaB04g20274 Brassica carinata HOM05D007901 ORTHO05D012782 5.4e-34 149.4 162 51.2
BolC1t03680H Brassica oleracea HOM05D007901 ORTHO05D012782 5.4e-34 149.4 161 52.2
Thhalv10023895m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 5.4e-34 149.4 165 48.5
BcaC09g49416 Brassica carinata HOM05D007901 ORTHO05D010902 1.3e-32 144.8 206 42.7
A01p28980 Brassica napus HOM05D007901 ORTHO05D010902 1.3e-32 144.8 245 38.0
Carub.0002s0501 Capsella rubella HOM05D007901 ORTHO05D012782 3.3e-31 140.2 154 49.4
CARHR052690 Cardamine hirsuta HOM05D007901 ORTHO05D016734 2.1e-30 137.5 107 61.7
Thhalv10024148m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 2.1e-30 137.5 131 55.0
Thhalv10024128m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 2.6e-28 130.6 111 61.3
Thhalv10024149m.g Eutrema salsugineum HOM05D007901 ORTHO05D012782 2.6e-28 130.6 111 61.3
AL2G16410 Arabidopsis lyrata HOM05D007901 ORTHO05D012782 2.2e-27 127.5 152 45.4
CARHR052710 Cardamine hirsuta HOM05D007901 ORTHO05D012782 4.7e-22 109.8 109 51.4
Sp2g04350 Schrenkiella parvula HOM05D007901 ORTHO05D010902 2.3e-21 107.5 211 36.5
C05p27640 Brassica napus HOM05D028664 ORTHO05D032055 5.2e-21 106.3 83 66.3
BolC5t31483H Brassica oleracea HOM05D028664 ORTHO05D032055 5.2e-21 106.3 83 66.3
AT1G60240 Arabidopsis thaliana HOM05D007901 ORTHO05D012782 2.9e-19 100.5 110 47.3
BcaC04g20179 Brassica carinata HOM05D007901 ORTHO05D012782 3.2e-18 97.1 89 57.3
CARHR052720 Cardamine hirsuta HOM05D007901 ORTHO05D012782 5.4e-18 96.3 105 46.7
BcaC05g26908 Brassica carinata HOM05D028664 ORTHO05D032055 6.8e-13 79.3 76 55.3
C09p31720 Brassica napus HOM05D007901 ORTHO05D024420 4.4e-12 76.6 248 30.6
C09p31750 Brassica napus HOM05D007901 ORTHO05D024420 4.4e-12 76.6 248 30.6
BolC9t56032H Brassica oleracea HOM05D007901 ORTHO05D024420 4.4e-12 76.6 248 30.6
BcaC04g21443 Brassica carinata HOM05D007901 ORTHO05D024420 5.8e-12 76.3 248 30.6
BcaC04g20880 Brassica carinata HOM05D028664 ORTHO05D039790 7.6e-12 75.9 52 76.9
BolC8t47961H Brassica oleracea HOM05D007986 ORTHO05D039790 3.0e-08 63.9 44 68.2
BcaC04g21438 Brassica carinata HOM05D007901 ORTHO05D095300 2.5e-07 60.8 221 29.9


User provided reference genes

Program Settings