Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p25750 Brassica napus HOM05D003839 ORTHO05D003352 3.7e-73 278.1 138 100.0
BolC4t24234H Brassica oleracea HOM05D003839 ORTHO05D003352 1.1e-72 276.6 138 99.3
BcaC02g10611 Brassica carinata HOM05D003839 ORTHO05D003352 8.2e-65 250.4 125 99.2
BraA08t34532Z Brassica rapa HOM05D003839 ORTHO05D003352 4.4e-58 228.0 135 83.0
A05p03580 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-56 223.4 133 85.0
BraA02t07568Z Brassica rapa HOM05D008292 ORTHO05D003352 1.1e-56 223.4 133 85.0
BraA01t02030Z Brassica rapa HOM05D035072 ORTHO05D003352 3.2e-37 158.7 92 88.0
BcaB06g26804 Brassica carinata HOM05D003839 ORTHO05D003352 7.8e-23 110.9 119 47.9
A08p00890 Brassica napus HOM05D035072 ORTHO05D041723 6.6e-22 107.8 64 87.5
BcaC03g17189 Brassica carinata HOM05D003839 ORTHO05D003352 8.6e-22 107.5 103 54.4
BraA08t32145Z Brassica rapa HOM05D035072 ORTHO05D041723 8.6e-22 107.5 64 87.5
BcaB06g26117 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-21 106.7 71 69.0
A05p21770 Brassica napus HOM05D003839 ORTHO05D003352 2.5e-21 105.9 100 51.0
BraA05t21098Z Brassica rapa HOM05D003839 ORTHO05D003352 2.5e-21 105.9 100 51.0
BcaC09g48196 Brassica carinata HOM05D003839 ORTHO05D039488 3.3e-21 105.5 89 61.8
BolC1t05291H Brassica oleracea HOM05D003839 ORTHO05D039488 3.3e-21 105.5 89 61.8
BolC6t38134H Brassica oleracea HOM05D003839 ORTHO05D003352 3.3e-21 105.5 117 46.2
BcaC03g17190 Brassica carinata HOM05D003839 ORTHO05D003352 5.6e-21 104.8 119 50.4
BcaC03g16634 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-21 104.4 116 44.8
A02p28670 Brassica napus HOM05D003839 ORTHO05D003352 9.5e-21 104.0 100 50.0
BraA02t07902Z Brassica rapa HOM05D003839 ORTHO05D003352 9.5e-21 104.0 100 50.0
BraA01t02837Z Brassica rapa HOM05D003839 ORTHO05D003352 1.2e-20 103.6 100 51.0
BcaC03g15389 Brassica carinata HOM05D003839 ORTHO05D003352 2.1e-20 102.8 116 44.8
BolC7t43565H Brassica oleracea HOM05D003839 ORTHO05D003352 2.1e-20 102.8 116 44.8
BcaC06g33695 Brassica carinata HOM05D003839 ORTHO05D003352 3.6e-20 102.1 100 50.0
C02p27640 Brassica napus HOM05D003839 ORTHO05D003352 3.6e-20 102.1 100 50.0
BolC8t48491H Brassica oleracea HOM05D003839 ORTHO05D003352 4.7e-20 101.7 100 50.0
BcaC05g29109 Brassica carinata HOM05D003839 ORTHO05D003352 6.1e-20 101.3 100 49.0
C05p53370 Brassica napus HOM05D003839 ORTHO05D003352 6.1e-20 101.3 100 49.0
BcaC05g27601 Brassica carinata HOM05D003839 ORTHO05D003352 8.0e-20 100.9 100 49.0
C05p35870 Brassica napus HOM05D003839 ORTHO05D003352 8.0e-20 100.9 100 49.0
C08p34220 Brassica napus HOM05D003839 ORTHO05D003352 1.0e-19 100.5 64 68.8
BolC8t51019H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-19 100.5 64 68.8
BcaB05g23330 Brassica carinata HOM05D003839 ORTHO05D003352 1.8e-19 99.8 102 50.0
BcaB01g01663 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-19 99.4 96 50.0
BcaB07g32710 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-19 99.4 107 49.5
BolC5t32306H Brassica oleracea HOM05D003839 ORTHO05D003352 2.3e-19 99.4 100 48.0
C02p24590 Brassica napus HOM05D003839 ORTHO05D003352 3.1e-19 99.0 105 42.9
C04p41030 Brassica napus HOM05D003839 ORTHO05D003352 3.1e-19 99.0 103 46.6
BolC4t25686H Brassica oleracea HOM05D003839 ORTHO05D003352 3.1e-19 99.0 103 46.6
A05p21290 Brassica napus HOM05D003839 ORTHO05D003352 4.0e-19 98.6 100 48.0
C03p63060 Brassica napus HOM05D003839 ORTHO05D003352 4.0e-19 98.6 100 48.0
BraA05t21037Z Brassica rapa HOM05D003839 ORTHO05D003352 4.0e-19 98.6 100 48.0
A04p07260 Brassica napus HOM05D003839 ORTHO05D003352 6.8e-19 97.8 117 43.6
C05p53340 Brassica napus HOM05D003839 ORTHO05D003352 6.8e-19 97.8 100 48.0
BolC5t34007H Brassica oleracea HOM05D003839 ORTHO05D003352 6.8e-19 97.8 100 47.0
BraA04t16421Z Brassica rapa HOM05D003839 ORTHO05D003352 6.8e-19 97.8 117 43.6
BcaB04g18348 Brassica carinata HOM05D003839 ORTHO05D003352 8.9e-19 97.4 102 47.1
C07p29940 Brassica napus HOM05D003839 ORTHO05D003352 8.9e-19 97.4 64 68.8
BcaB06g26196 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-18 96.7 97 48.5
BcaB07g32609 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-18 96.7 104 47.1
BcaB01g01517 Brassica carinata HOM05D003839 ORTHO05D003352 2.0e-18 96.3 107 48.6
BcaB07g32949 Brassica carinata HOM05D003839 ORTHO05D003352 3.4e-18 95.5 104 46.2
A05p17610 Brassica napus HOM05D003839 ORTHO05D003352 3.4e-18 95.5 107 44.9
BraA01t02749Z Brassica rapa HOM05D003839 ORTHO05D003352 3.4e-18 95.5 117 43.6
BcaB05g23505 Brassica carinata HOM05D003839 ORTHO05D003352 4.4e-18 95.1 104 48.1
BcaB06g27258 Brassica carinata HOM05D003839 ORTHO05D003352 5.8e-18 94.7 104 46.2
BraA01t03014Z Brassica rapa HOM05D003839 ORTHO05D003352 5.8e-18 94.7 116 43.1
BcaB03g16839 Brassica carinata HOM05D003839 ORTHO05D003352 7.5e-18 94.4 102 46.1
BcaB04g17572 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-17 93.6 118 44.9
BcaB01g00721 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-17 92.0 104 45.2
BcaB08g35818 Brassica carinata HOM05D003839 ORTHO05D003352 3.7e-17 92.0 103 49.5
BcaB04g17113 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-17 91.7 104 46.2
BcaC01g02162 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-16 90.5 127 39.4
C03p67990 Brassica napus HOM05D003839 ORTHO05D003352 1.1e-16 90.5 127 39.4
BcaB01g02875 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-16 89.0 103 43.7
BcaC03g15184 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-16 89.0 100 46.0
A09p32650 Brassica napus HOM05D003839 ORTHO05D003352 4.1e-16 88.6 117 41.0
BolC6t35618H Brassica oleracea HOM05D003839 ORTHO05D003352 9.2e-16 87.4 90 44.4
C02p27160 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-15 87.0 88 48.9
BcaB02g06777 Brassica carinata HOM05D003839 ORTHO05D003352 3.5e-15 85.5 119 40.3
BcaC08g43741 Brassica carinata HOM05D003839 ORTHO05D003352 4.6e-15 85.1 67 61.2
Thhalv10002269m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.0e-15 84.7 86 43.0
BolC2t09048H Brassica oleracea HOM05D003839 ORTHO05D003352 7.8e-15 84.3 77 51.9
BcaNung02469 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-14 83.6 114 40.4
C07p40670 Brassica napus HOM05D003839 ORTHO05D003352 1.3e-14 83.6 114 40.4
BolC2t10492H Brassica oleracea HOM05D003839 ORTHO05D003352 3.9e-14 82.0 90 43.3
BolC2t11209H Brassica oleracea HOM05D003839 ORTHO05D003352 3.9e-14 82.0 80 56.2
BcaB02g06630 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-13 80.5 128 38.3
Thhalv10005441m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.1e-13 80.5 115 37.4
BcaC09g50233 Brassica carinata HOM05D003839 ORTHO05D003352 1.5e-13 80.1 100 44.0
BolC9t57767H Brassica oleracea HOM05D003839 ORTHO05D003352 1.5e-13 80.1 77 50.6
A03p67260 Brassica napus HOM05D003839 ORTHO05D003352 1.9e-13 79.7 91 45.1
C02p44490 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-13 79.0 90 42.2
C04p33340 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-13 79.0 86 40.7
C06p50270 Brassica napus HOM05D003839 ORTHO05D003352 3.3e-13 79.0 86 40.7
BcaB07g30584 Brassica carinata HOM05D003839 ORTHO05D003352 5.6e-13 78.2 95 45.3
BcaC04g22104 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-13 77.8 100 42.0
BcaC09g48414 Brassica carinata HOM05D003839 ORTHO05D003352 7.3e-13 77.8 84 41.7
C08p08050 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-12 77.0 84 44.0
Thhalv10003388m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.2e-12 77.0 83 43.4
C03p91870 Brassica napus HOM05D003839 ORTHO05D003352 2.1e-12 76.3 86 38.4
BolC3t19025H Brassica oleracea HOM05D003839 ORTHO05D003352 2.1e-12 76.3 115 38.3
BolC3t21507H Brassica oleracea HOM05D003839 ORTHO05D003352 2.1e-12 76.3 86 38.4
A03p53820 Brassica napus HOM05D000943 ORTHO05D002475 2.8e-12 75.9 112 39.3
BcaB05g24307 Brassica carinata HOM05D003839 ORTHO05D003352 6.2e-12 74.7 127 37.8
BcaC07g37358 Brassica carinata HOM05D003839 ORTHO05D003352 6.2e-12 74.7 83 43.4
C08p08700 Brassica napus HOM05D000096 ORTHO05D000045 6.2e-12 74.7 84 44.0
BcaC06g36011 Brassica carinata HOM05D003839 ORTHO05D003352 1.1e-11 73.9 70 51.4
BcaC06g35795 Brassica carinata HOM05D000115 ORTHO05D011879 1.4e-11 73.6 59 66.1
A01p36380 Brassica napus HOM05D003839 ORTHO05D003352 1.4e-11 73.6 114 36.0
BolC3t20345H Brassica oleracea HOM05D003839 ORTHO05D003352 1.4e-11 73.6 62 53.2
Thhalv10005434m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.8e-11 73.2 105 36.2
BcaB01g00514 Brassica carinata HOM05D003839 ORTHO05D003352 2.3e-11 72.8 68 50.0
BcaC01g01423 Brassica carinata HOM05D003839 ORTHO05D003352 4.0e-11 72.0 83 38.6
C09p23320 Brassica napus HOM05D003839 ORTHO05D003352 4.0e-11 72.0 63 54.0
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 6.8e-11 71.2 114 36.0
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 6.8e-11 71.2 114 36.0
BcaC07g38083 Brassica carinata HOM05D003839 ORTHO05D003352 8.9e-11 70.9 63 52.4
A05p20350 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-10 70.5 90 41.1
C05p17950 Brassica napus HOM05D003839 ORTHO05D003352 1.2e-10 70.5 73 49.3
BraA09t40513Z Brassica rapa HOM05D003839 ORTHO05D003352 1.5e-10 70.1 81 40.7
C03p63070 Brassica napus HOM05D003839 ORTHO05D003352 2.6e-10 69.3 63 52.4
C03p57520 Brassica napus HOM05D014297 ORTHO05D019911 3.4e-10 68.9 85 37.6
BcaB04g17896 Brassica carinata HOM05D003839 ORTHO05D003352 4.4e-10 68.6 108 35.2
BcaB03g16489 Brassica carinata HOM05D003839 ORTHO05D003352 1.7e-09 66.6 65 52.3
BolC1t03162H Brassica oleracea HOM05D003839 ORTHO05D003352 2.9e-09 65.9 88 39.8
BcaB07g31055 Brassica carinata HOM05D003839 ORTHO05D003352 4.9e-09 65.1 65 52.3
A03p53810 Brassica napus HOM05D000357 ORTHO05D000242 4.9e-09 65.1 79 36.7
CARHR101890 Cardamine hirsuta HOM05D008292 ORTHO05D003352 4.9e-09 65.1 92 37.0
BolC5t34293H Brassica oleracea HOM05D021406 ORTHO05D020172 6.4e-09 64.7 49 61.2
Thhalv10003316m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 8.3e-09 64.3 110 34.5
BraA07t28801Z Brassica rapa HOM05D003839 ORTHO05D003352 1.1e-08 63.9 94 37.2
BcaC08g44281 Brassica carinata HOM05D003839 ORTHO05D039180 1.9e-08 63.2 85 38.8
C06p24070 Brassica napus HOM05D018430 ORTHO05D020143 1.9e-08 63.2 63 44.4
Thhalv10002917m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 1.9e-08 63.2 113 31.0
BcaB02g07569 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-08 62.8 72 44.4
BcaB07g31374 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-08 62.8 68 45.6
BcaC04g22280 Brassica carinata HOM05D003839 ORTHO05D003352 2.4e-08 62.8 86 36.0
A09p20270 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-08 62.8 86 34.9
C09p21410 Brassica napus HOM05D003839 ORTHO05D003352 2.4e-08 62.8 86 36.0
BcaC01g02980 Brassica carinata HOM05D003839 ORTHO05D003352 3.2e-08 62.4 62 45.2
BcaC07g37400 Brassica carinata HOM05D000313 ORTHO05D000065 4.1e-08 62.0 93 36.6
BolC8t47719H Brassica oleracea HOM05D000096 ORTHO05D000045 4.1e-08 62.0 93 36.6
AL8G28420 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 7.1e-08 61.2 113 30.1
A09p19700 Brassica napus HOM05D003839 ORTHO05D003352 7.1e-08 61.2 74 39.2
BcaB06g27469 Brassica carinata HOM05D003839 ORTHO05D003352 1.6e-07 60.1 49 55.1
C01p50050 Brassica napus HOM05D003839 ORTHO05D003352 1.6e-07 60.1 63 41.3
AL4G17890 Arabidopsis lyrata HOM05D003839 ORTHO05D003352 2.1e-07 59.7 99 32.3
C03p32250 Brassica napus HOM05D008292 ORTHO05D003352 2.1e-07 59.7 109 31.2
A03p67960 Brassica napus HOM05D003839 ORTHO05D003352 2.7e-07 59.3 74 37.8
BcaC01g05021 Brassica carinata HOM05D003839 ORTHO05D095186 3.5e-07 58.9 51 60.8
BcaC07g37053 Brassica carinata HOM05D008292 ORTHO05D003352 3.5e-07 58.9 95 31.6
A05p32880 Brassica napus HOM05D008292 ORTHO05D003352 4.6e-07 58.5 89 32.6
A06p31440 Brassica napus HOM05D008292 ORTHO05D003352 4.6e-07 58.5 84 32.1
A09p40840 Brassica napus HOM05D008292 ORTHO05D003352 4.6e-07 58.5 84 32.1
BolC3t15567H Brassica oleracea HOM05D008292 ORTHO05D003352 4.6e-07 58.5 91 31.9
BraA05t22695Z Brassica rapa HOM05D008292 ORTHO05D003352 4.6e-07 58.5 89 32.6
C08p36920 Brassica napus HOM05D008292 ORTHO05D003352 6.0e-07 58.2 109 30.3
BolC6t35914H Brassica oleracea HOM05D003839 ORTHO05D003352 6.0e-07 58.2 98 32.7
Thhalv10002164m.g Eutrema salsugineum HOM05D003839 ORTHO05D003352 6.0e-07 58.2 117 35.0
BcaB05g23090 Brassica carinata HOM05D003839 ORTHO05D032372 7.8e-07 57.8 53 52.8
BcaC03g15793 Brassica carinata HOM05D008292 ORTHO05D003352 7.8e-07 57.8 89 32.6
BolC4t27064H Brassica oleracea HOM05D008292 ORTHO05D003352 7.8e-07 57.8 89 32.6
C05p49230 Brassica napus HOM05D003839 ORTHO05D032372 1.0e-06 57.4 49 55.1
BolC9t55033H Brassica oleracea HOM05D003839 ORTHO05D003352 1.0e-06 57.4 93 34.4
BraA02t07279Z Brassica rapa HOM05D003839 ORTHO05D003352 1.0e-06 57.4 63 41.3
BcaB05g21582 Brassica carinata HOM05D003839 ORTHO05D003352 1.3e-06 57.0 62 46.8
BcaC06g36055 Brassica carinata HOM05D008292 ORTHO05D003352 1.3e-06 57.0 109 29.4
C03p19740 Brassica napus HOM05D008292 ORTHO05D003352 1.3e-06 57.0 89 32.6
BolC9t54875H Brassica oleracea HOM05D003839 ORTHO05D019911 1.3e-06 57.0 78 39.7
BcaC04g22402 Brassica carinata HOM05D040257 ORTHO05D032373 1.7e-06 56.6 91 34.1
BcaNung06308 Brassica carinata HOM05D008292 ORTHO05D003352 1.7e-06 56.6 109 30.3
BraA08t34531Z Brassica rapa HOM05D008292 ORTHO05D003352 1.7e-06 56.6 84 33.3
C07p08430 Brassica napus HOM05D008292 ORTHO05D003352 2.3e-06 56.2 91 30.8
BcaB01g00717 Brassica carinata HOM05D003839 ORTHO05D003352 3.0e-06 55.8 54 46.3
BcaC03g15888 Brassica carinata HOM05D008292 ORTHO05D003352 3.0e-06 55.8 85 32.9
BcaNung06257 Brassica carinata HOM05D014297 ORTHO05D019911 3.0e-06 55.8 71 38.0
C09p33270 Brassica napus HOM05D008292 ORTHO05D003352 3.0e-06 55.8 68 41.2
BolC5t33664H Brassica oleracea HOM05D003839 ORTHO05D032372 3.0e-06 55.8 45 55.6
BolC9t56163H Brassica oleracea HOM05D008292 ORTHO05D003352 3.0e-06 55.8 68 41.2
BraA05t20816Z Brassica rapa HOM05D003839 ORTHO05D020172 3.0e-06 55.8 40 67.5
BcaB01g00999 Brassica carinata HOM05D008292 ORTHO05D003352 3.9e-06 55.5 84 34.5
BcaB04g18557 Brassica carinata HOM05D003839 ORTHO05D003352 3.9e-06 55.5 62 46.8
A01p17040 Brassica napus HOM05D008292 ORTHO05D003352 3.9e-06 55.5 68 41.2
BolC4t27974H Brassica oleracea HOM05D003839 ORTHO05D003352 3.9e-06 55.5 97 30.9
BraA09t39508Z Brassica rapa HOM05D008292 ORTHO05D003352 3.9e-06 55.5 68 41.2
BcaC04g21847 Brassica carinata HOM05D009411 ORTHO05D014997 5.1e-06 55.1 62 45.2
C09p26700 Brassica napus HOM05D009411 ORTHO05D014997 5.1e-06 55.1 62 45.2
BolC9t55562H Brassica oleracea HOM05D009411 ORTHO05D014997 5.1e-06 55.1 62 45.2
BcaC03g17703 Brassica carinata HOM05D008292 ORTHO05D003352 6.6e-06 54.7 84 32.1
A05p19130 Brassica napus HOM05D021406 ORTHO05D020172 6.6e-06 54.7 40 65.0
C05p32830 Brassica napus HOM05D003839 ORTHO05D003352 6.6e-06 54.7 45 53.3
BolC2t11778H Brassica oleracea HOM05D008292 ORTHO05D003352 6.6e-06 54.7 84 32.1
A08p04800 Brassica napus HOM05D021406 ORTHO05D020172 8.6e-06 54.3 40 65.0
BolC6t39088H Brassica oleracea HOM05D008292 ORTHO05D003352 8.6e-06 54.3 85 31.8


User provided reference genes

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