Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 1.3e-221 772.7 380 100.0
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 1.3e-221 772.7 380 100.0
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 9.4e-220 766.5 380 99.7
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 1.5e-214 749.2 380 96.8
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 2.2e-213 745.3 380 96.3
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.1e-212 743.0 380 95.8
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 6.1e-203 710.7 383 91.6
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 3.8e-189 664.8 380 86.1
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.6e-187 659.4 383 84.6
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 3.1e-183 645.2 384 83.1
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 2.5e-180 635.6 385 81.6
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 1.1e-164 583.6 380 75.5
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 3.6e-163 578.6 355 80.8
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 7.1e-151 537.7 385 68.6
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 6.4e-144 514.6 384 64.8
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 8.4e-144 514.2 383 64.2
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 3.9e-141 505.4 382 63.4
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 6.6e-141 504.6 382 63.1
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.3e-139 500.4 382 62.8
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.1e-139 499.6 384 62.2
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 3.6e-139 498.8 388 62.6
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 6.2e-139 498.0 380 62.9
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 4.0e-138 495.4 382 62.0
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 5.3e-138 495.0 382 62.3
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 7.6e-137 491.1 378 63.2
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.7e-136 490.0 381 61.9
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.2e-136 489.6 382 61.5
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 2.2e-136 489.6 382 62.0
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 4.2e-135 485.3 380 62.9
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 4.2e-135 485.3 377 61.5
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 2.1e-134 483.0 385 61.8
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 2.7e-134 482.6 420 58.8
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 3.9e-133 478.8 378 62.4
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 3.9e-133 478.8 376 63.6
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 1.9e-132 476.5 381 58.5
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 9.6e-132 474.2 375 61.6
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 9.6e-132 474.2 383 61.1
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 1.3e-131 473.8 383 61.4
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 3.7e-131 472.2 372 62.9
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 9.0e-130 467.6 379 60.7
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 9.0e-130 467.6 414 56.3
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.5e-129 466.8 362 61.9
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.4e-129 465.7 378 60.3
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 4.5e-129 465.3 378 57.9
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 7.6e-129 464.5 377 61.0
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 1.3e-128 463.8 379 60.2
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 3.8e-128 462.2 374 61.5
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 4.9e-128 461.8 398 59.0
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 6.4e-128 461.5 379 59.9
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 6.4e-128 461.5 379 59.9
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 8.4e-128 461.1 380 59.7
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 1.1e-127 460.7 382 59.7
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.4e-127 460.3 380 60.0
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.9e-127 459.9 380 59.2
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 3.2e-127 459.1 380 59.2
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 5.5e-127 458.4 374 62.0
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 2.1e-126 456.4 380 58.7
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 2.1e-126 456.4 380 58.9
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 2.7e-126 456.1 378 60.1
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 2.3e-125 453.0 362 62.2
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 3.9e-125 452.2 383 57.4
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 6.7e-125 451.4 362 62.2
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.9e-124 449.9 374 60.2
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.3e-124 449.1 376 59.3
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.8e-123 445.3 381 58.3
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 4.8e-123 445.3 377 59.2
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 6.2e-123 444.9 374 60.2
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 5.3e-122 441.8 372 58.3
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 6.9e-122 441.4 353 60.6
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 9.0e-122 441.0 374 58.3
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 4.5e-121 438.7 381 56.4
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 8.4e-120 434.5 376 57.4
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 7.1e-119 431.4 384 56.5
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 9.3e-119 431.0 385 56.9
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 2.1e-118 429.9 380 56.6
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 1.9e-116 423.3 379 55.1
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 4.3e-116 422.2 357 58.3
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.1e-111 407.5 374 56.1
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.9e-111 406.8 374 55.9
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 4.2e-111 405.6 322 62.7
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 1.0e-109 401.0 378 51.3
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.4e-109 400.6 374 55.3
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 1.5e-108 397.1 380 52.9
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 3.7e-107 392.5 371 52.8
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 1.1e-106 391.0 379 52.8
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 4.1e-106 389.0 376 53.5
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 5.3e-106 388.7 308 61.7
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 2.6e-105 386.3 379 52.5
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.0e-104 384.4 218 83.5
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 6.5e-104 381.7 375 52.3
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 8.5e-104 381.3 399 52.4
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 9.4e-103 377.9 374 50.8
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 3.6e-102 375.9 284 63.7
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 6.1e-102 375.2 358 54.7
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 1.4e-101 374.0 305 62.3
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 1.1e-100 370.9 306 60.5
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 9.7e-100 367.9 329 57.1
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 2.2e-99 366.7 386 51.3
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 6.3e-99 365.2 270 65.6
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.1e-98 364.4 380 50.0
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 1.3e-96 357.5 289 62.3
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 9.4e-95 351.3 378 49.2
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.4e-93 347.4 378 50.0
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.2e-84 317.8 307 55.4
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 9.7e-84 314.7 226 65.9
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.1e-82 311.2 399 43.6
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 1.2e-81 307.8 380 42.9
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 6.5e-80 302.0 286 54.2
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 8.5e-80 301.6 378 44.7
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 4.7e-78 295.8 372 44.9
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 6.1e-78 295.4 274 55.5
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 2.3e-77 293.5 343 47.5
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 4.4e-76 289.3 379 39.8
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 2.1e-62 243.8 183 60.7
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 8.9e-61 238.4 395 34.2
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 1.3e-51 208.0 195 55.9
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 3.9e-48 196.4 164 58.5
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 4.6e-33 146.4 149 52.3
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 9.3e-26 122.1 95 65.3
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 3.5e-25 120.2 111 53.2
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 3.3e-23 113.6 114 47.4
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.6e-22 111.3 210 37.1
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 1.8e-13 81.3 80 47.5
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 9.0e-13 79.0 49 63.3
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 6.0e-09 66.2 140 32.9


User provided reference genes

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