Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p25270 Brassica napus HOM05D001148 ORTHO05D040423 1.5e-23 112.1 58 100.0
BolC4t24033H Brassica oleracea HOM05D001148 ORTHO05D040423 1.5e-23 112.1 58 100.0
CARHR181800 Cardamine hirsuta HOM05D001148 ORTHO05D000960 3.5e-17 90.9 57 82.5
BcaB07g30612 Brassica carinata HOM05D001148 ORTHO05D000960 1.0e-16 89.4 57 82.5
BcaC03g16531 Brassica carinata HOM05D001148 ORTHO05D000960 5.0e-16 87.0 57 80.7
C02p43450 Brassica napus HOM05D001148 ORTHO05D000960 5.0e-16 87.0 57 80.7
BolC2t10402H Brassica oleracea HOM05D001148 ORTHO05D000960 5.0e-16 87.0 57 80.7
Carub.0008s0645 Capsella rubella HOM05D001148 ORTHO05D000960 1.5e-15 85.5 57 78.9
AL8G18690 Arabidopsis lyrata HOM05D001148 ORTHO05D000960 1.9e-15 85.1 57 77.2
Sp2g06960 Schrenkiella parvula HOM05D001148 ORTHO05D000960 3.3e-15 84.3 57 78.9
SpUn0014_0110 Schrenkiella parvula HOM05D001148 ORTHO05D000960 3.3e-15 84.3 57 78.9
A02p27230 Brassica napus HOM05D001148 ORTHO05D000960 6.2e-14 80.1 57 75.4
BraA02t07739Z Brassica rapa HOM05D001148 ORTHO05D000960 6.2e-14 80.1 57 75.4
AT5G42570 Arabidopsis thaliana HOM05D001148 ORTHO05D000960 2.3e-13 78.2 57 73.7
Aa31LG7G3550 Aethionema arabicum HOM05D001148 ORTHO05D000960 2.6e-12 74.7 57 66.7
Rhsim06G0163800 Rhododendron simsii HOM05D001148 ORTHO05D000960 8.3e-11 69.7 58 63.8
TWI75G1046 Tripterygium wilfordii HOM05D001148 ORTHO05D000960 1.1e-10 69.3 56 66.1
TWI36G0690 Tripterygium wilfordii HOM05D001148 ORTHO05D000960 2.7e-09 64.7 56 60.7
DCAR_019760 Daucus carota HOM05D001148 ORTHO05D000960 3.0e-08 61.2 55 58.2
Nitab4.5_0000005g0230 Nicotiana tabacum HOM05D001148 ORTHO05D000960 3.9e-08 60.8 55 56.4
THA.LOC104820464 Tarenaya hassleriana HOM05D001148 ORTHO05D000960 3.9e-08 60.8 57 61.4
Nn1g03465 Nelumbo nucifera HOM05D001148 ORTHO05D000960 5.1e-08 60.5 57 57.9
Rhsim06G0163700 Rhododendron simsii HOM05D001148 ORTHO05D000960 6.6e-08 60.1 49 63.3
DCAR_021166 Daucus carota HOM05D001148 ORTHO05D000960 8.6e-08 59.7 54 61.1
Hma1.2p1_0039F.1_g024500 Hydrangea macrophylla HOM05D001148 ORTHO05D000960 1.1e-07 59.3 54 57.4
Nitab4.5_0004712g0030 Nicotiana tabacum HOM05D001148 ORTHO05D000960 1.5e-07 58.9 55 54.5
Peaxi162Scf00307g01423 Petunia axillaris HOM05D001148 ORTHO05D000960 1.5e-07 58.9 55 56.4
Peaxi162Scf00394g00021 Petunia axillaris HOM05D001148 ORTHO05D000960 1.5e-07 58.9 55 56.4
TWI38G0419 Tripterygium wilfordii HOM05D001148 ORTHO05D000960 1.5e-07 58.9 55 54.5
Ca_19507_v3 Cicer arietinum L. HOM05D001148 ORTHO05D000960 1.9e-07 58.5 49 61.2
Ca_19511_v3 Cicer arietinum L. HOM05D001148 ORTHO05D000960 1.9e-07 58.5 49 61.2
Nn1g07207 Nelumbo nucifera HOM05D001148 ORTHO05D000960 2.5e-07 58.2 55 58.2
vmacro12192 Vaccinium macrocarpon HOM05D001148 ORTHO05D000960 2.5e-07 58.2 55 56.4
CSS0035765 Camellia sinensis var. sinensis HOM05D001148 ORTHO05D000960 4.3e-07 57.4 55 58.2
TAR624G0132 Trochodendron aralioides HOM05D001148 ORTHO05D000960 5.6e-07 57.0 54 53.7
Dinv13922 Davidia involucrata HOM05D001148 ORTHO05D000960 7.3e-07 56.6 55 54.5
Solyc02g032930.3 Solanum lycopersicum HOM05D001148 ORTHO05D000960 7.3e-07 56.6 55 54.5
Sopen02g011300 Solanum pennellii HOM05D001148 ORTHO05D000960 7.3e-07 56.6 55 54.5
CSS0010760 Camellia sinensis var. sinensis HOM05D001148 ORTHO05D000960 1.2e-06 55.8 55 58.2
Medtr4g049540 Medicago truncatula HOM05D001148 ORTHO05D000960 1.6e-06 55.5 47 61.7
GSVIVG01012687001 Vitis vinifera HOM05D001148 ORTHO05D000960 1.6e-06 55.5 54 53.7
CiPaw.04G114600 Carya illinoinensis HOM05D001148 ORTHO05D000960 2.8e-06 54.7 46 63.0
Oeu051888.1 Olea europaea HOM05D001148 ORTHO05D000960 2.8e-06 54.7 55 52.7
QL08p032616 Quercus lobata HOM05D001148 ORTHO05D000960 2.8e-06 54.7 40 67.5
PGSC0003DMG400022061 Solanum tuberosum HOM05D001148 ORTHO05D000960 2.8e-06 54.7 55 52.7
COL.COLO4_31803 Corchorus olitorius HOM05D001148 ORTHO05D000960 3.6e-06 54.3 57 50.9
TPR.G4616 Trifolium pratense HOM05D001148 ORTHO05D000960 3.6e-06 54.3 47 59.6
Duzib160G0340 Durio zibethinus HOM05D001148 ORTHO05D000960 4.7e-06 53.9 56 50.0
TWI38G1396 Tripterygium wilfordii HOM05D001148 ORTHO05D000960 4.7e-06 53.9 55 50.9
Lj1A1233G61 Lonicera japonica HOM05D001148 ORTHO05D000960 6.2e-06 53.5 55 54.5
CAN.G123.9 Capsicum annuum HOM05D001148 ORTHO05D000960 8.1e-06 53.1 55 50.9
vmacro12193 Vaccinium macrocarpon HOM05D001148 ORTHO05D000960 8.1e-06 53.1 55 54.5


User provided reference genes

Program Settings