Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p25250 Brassica napus HOM05D000004 ORTHO05D000563 5.1e-54 214.2 108 100.0
BolC1t03219H Brassica oleracea HOM05D000004 ORTHO05D000563 5.0e-17 91.3 47 83.0
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-08 63.2 48 54.2
Cpa.g.sc3290.1 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-07 60.1 58 41.4
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 1.6e-07 59.7 49 55.1
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 1.6e-07 59.7 49 55.1
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-07 58.9 49 46.9
Cpa.g.sc28.117 Carica papaya HOM05D000004 ORTHO05D000563 2.7e-07 58.9 48 47.9
Cpa.g.sc38.15 Carica papaya HOM05D000004 ORTHO05D000563 3.6e-07 58.5 48 47.9
SHI01378 Sapria himalayana HOM05D000004 ORTHO05D000563 4.7e-07 58.2 49 51.0
Cpa.g.sc210.11 Carica papaya HOM05D000004 ORTHO05D000563 6.1e-07 57.8 48 45.8
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 6.1e-07 57.8 48 52.1
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 6.1e-07 57.8 48 52.1
Cpa.g.sc38.20 Carica papaya HOM05D000004 ORTHO05D000563 8.0e-07 57.4 48 45.8
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 8.0e-07 57.4 48 45.8
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 8.0e-07 57.4 48 50.0
THA.LOC109116034 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 8.0e-07 57.4 48 47.9
Cpa.g.sc11.81 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-06 57.0 47 46.8
Cpa.g.sc1364.1 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-06 57.0 48 43.8
Atru.chr8.715 Acer truncatum HOM05D000004 ORTHO05D000563 1.4e-06 56.6 48 45.8
Cpa.g.sc1555.2 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-06 56.6 48 45.8
Cpa.g.sc39.88 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-06 56.6 58 39.7
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-06 56.6 48 45.8
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 48 50.0
Cpa.g.sc1083.1 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-06 56.2 48 45.8
Cpa.g.sc1884.2 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-06 56.2 49 42.9
Cpa.g.sc28.100 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-06 56.2 48 43.8
Cpa.g.sc303.2 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-06 56.2 48 45.8
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 1.8e-06 56.2 48 50.0
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.8e-06 56.2 48 47.9
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.8e-06 56.2 48 47.9
THA.LOC104807122 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.8e-06 56.2 52 46.2
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.8e-06 56.2 48 47.9
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 2.3e-06 55.8 49 51.0
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 3.0e-06 55.5 51 41.2
Cpa.g.sc71.24 Carica papaya HOM05D000004 ORTHO05D000563 3.0e-06 55.5 48 45.8
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 3.0e-06 55.5 48 50.0
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 3.0e-06 55.5 48 50.0
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 4.0e-06 55.1 48 50.0
Cpa.g.sc154.9 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-06 54.7 48 43.8
Cpa.g.sc31.28 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-06 54.7 48 43.8
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-06 54.7 49 42.9
SHI31146 Sapria himalayana HOM05D000004 ORTHO05D000563 5.2e-06 54.7 49 44.9
Cpa.g.sc60.45 Carica papaya HOM05D000004 ORTHO05D000563 6.7e-06 54.3 48 43.8
Cpa.g.sc203.12 Carica papaya HOM05D000004 ORTHO05D000563 8.8e-06 53.9 49 46.9
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 8.8e-06 53.9 48 43.8
ECA240G1927 Erigeron canadensis HOM05D000145 ORTHO05D000115 8.8e-06 53.9 52 40.4
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 8.8e-06 53.9 48 47.9
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 8.8e-06 53.9 48 47.9


User provided reference genes

Program Settings