Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p24260 Brassica napus HOM05D000003 ORTHO05D014927 1.7e-41 172.2 83 100.0
BolC4t23924H Brassica oleracea HOM05D000003 ORTHO05D014927 3.8e-41 171.0 83 98.8
BraA08t32742Z Brassica rapa HOM05D000003 ORTHO05D014927 1.0e-30 136.3 85 80.0
BcaC03g14554 Brassica carinata HOM05D000003 ORTHO05D014927 4.4e-21 104.4 62 80.6
C02p20030 Brassica napus HOM05D000003 ORTHO05D014927 4.4e-21 104.4 62 80.6
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 1.4e-19 99.4 79 59.5
BcaB05g22894 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-19 99.0 80 60.0
BcaC06g35739 Brassica carinata HOM05D000003 ORTHO05D027234 2.7e-18 95.1 76 53.9
C04p68880 Brassica napus HOM05D000003 ORTHO05D014927 2.7e-18 95.1 61 75.4
BcaC06g35337 Brassica carinata HOM05D000003 ORTHO05D000006 5.9e-18 94.0 78 56.4
BolC4t22151H Brassica oleracea HOM05D000914 ORTHO05D000718 1.3e-17 92.8 78 59.0
A03p62850 Brassica napus HOM05D000003 ORTHO05D001498 6.5e-17 90.5 70 60.0
BcaC06g34794 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-16 89.7 80 53.8
C07p24620 Brassica napus HOM05D000003 ORTHO05D001498 1.1e-16 89.7 80 53.8
BolC7t42982H Brassica oleracea HOM05D000003 ORTHO05D001498 1.1e-16 89.7 80 53.8
BolC4t23645H Brassica oleracea HOM05D000003 ORTHO05D001498 7.2e-16 87.0 70 57.1
BolC8t47955H Brassica oleracea HOM05D000003 ORTHO05D001498 6.1e-15 84.0 80 50.0
BcaC06g36398 Brassica carinata HOM05D000003 ORTHO05D014927 8.0e-15 83.6 78 46.2
C07p04560 Brassica napus HOM05D000003 ORTHO05D014927 8.0e-15 83.6 78 46.2
BcaC09g50587 Brassica carinata HOM05D000003 ORTHO05D001498 4.0e-14 81.3 82 46.3
BraA06t25211Z Brassica rapa HOM05D000003 ORTHO05D001498 4.0e-14 81.3 82 46.3
BcaC06g35891 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-14 80.9 82 45.1
A08p06880 Brassica napus HOM05D000003 ORTHO05D000004 5.2e-14 80.9 82 46.3
BolC7t41443H Brassica oleracea HOM05D000003 ORTHO05D000004 5.2e-14 80.9 82 45.1
BraA08t32705Z Brassica rapa HOM05D000003 ORTHO05D000004 5.2e-14 80.9 82 46.3
BolC6t35313H Brassica oleracea HOM05D000003 ORTHO05D001498 1.2e-13 79.7 82 45.1
BcaC08g46350 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-13 77.8 77 46.8
C06p40810 Brassica napus HOM05D000003 ORTHO05D001498 4.4e-13 77.8 77 46.8
BolC6t39352H Brassica oleracea HOM05D000003 ORTHO05D001498 4.4e-13 77.8 77 46.8
BraA10t42905Z Brassica rapa HOM05D000003 ORTHO05D001498 7.5e-13 77.0 79 46.8
A03p66550 Brassica napus HOM05D000003 ORTHO05D016102 2.2e-12 75.5 69 52.2
BcaC04g19472 Brassica carinata HOM05D000003 ORTHO05D001498 8.3e-12 73.6 76 44.7
BcaC08g45918 Brassica carinata HOM05D000003 ORTHO05D016102 1.4e-11 72.8 74 47.3
Sp6g10470 Schrenkiella parvula HOM05D000003 ORTHO05D001498 1.4e-11 72.8 75 48.0
C07p15960 Brassica napus HOM05D009133 ORTHO05D016102 4.1e-11 71.2 75 46.7
C07p15980 Brassica napus HOM05D009133 ORTHO05D016102 4.1e-11 71.2 75 46.7
BcaB02g10016 Brassica carinata HOM05D000003 ORTHO05D019978 9.1e-11 70.1 77 41.6
BcaC02g09456 Brassica carinata HOM05D009133 ORTHO05D032371 1.2e-10 69.7 78 46.2
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-10 68.6 74 45.9
BcaC06g36425 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-10 68.2 78 43.6
BcaC09g51068 Brassica carinata HOM05D000003 ORTHO05D001498 3.5e-10 68.2 77 40.3
C04p37710 Brassica napus HOM05D000003 ORTHO05D014927 3.5e-10 68.2 58 56.9
BcaB01g02280 Brassica carinata HOM05D000003 ORTHO05D001498 4.5e-10 67.8 69 47.8
BcaC09g49748 Brassica carinata HOM05D000003 ORTHO05D019978 5.9e-10 67.4 78 42.3
C02p54220 Brassica napus HOM05D009133 ORTHO05D016102 5.9e-10 67.4 75 44.0
BcaC03g16617 Brassica carinata HOM05D000003 ORTHO05D000411 7.7e-10 67.0 80 37.5
BcaB06g26736 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-09 66.6 72 45.8
BolC7t46481H Brassica oleracea HOM05D000003 ORTHO05D001498 1.0e-09 66.6 78 41.0
BcaC08g44324 Brassica carinata HOM05D000003 ORTHO05D001498 1.3e-09 66.2 77 42.9
BcaC02g12838 Brassica carinata HOM05D000003 ORTHO05D001498 1.7e-09 65.9 69 43.5
BraA07t30824Z Brassica rapa HOM05D000003 ORTHO05D027722 1.7e-09 65.9 77 41.6
BraA10t45387Z Brassica rapa HOM05D000003 ORTHO05D027722 1.7e-09 65.9 77 41.6
BcaC05g28073 Brassica carinata HOM05D000003 ORTHO05D000411 2.2e-09 65.5 81 39.5
BcaNung03323 Brassica carinata HOM05D000003 ORTHO05D016015 2.2e-09 65.5 78 41.0
BcaB04g17941 Brassica carinata HOM05D000003 ORTHO05D000004 2.9e-09 65.1 77 44.2
BcaB05g22054 Brassica carinata HOM05D000003 ORTHO05D001498 2.9e-09 65.1 74 43.2
BolC6t37477H Brassica oleracea HOM05D000003 ORTHO05D001498 2.9e-09 65.1 73 45.2
Sp7g03745 Schrenkiella parvula HOM05D000003 ORTHO05D001498 2.9e-09 65.1 78 41.0
BcaB06g29528 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-09 64.7 80 37.5
BcaC02g07192 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-09 64.7 73 45.2
C04p43000 Brassica napus HOM05D009133 ORTHO05D032371 3.8e-09 64.7 78 43.6
BolC4t25870H Brassica oleracea HOM05D009133 ORTHO05D032371 3.8e-09 64.7 78 43.6
BcaB02g07356 Brassica carinata HOM05D000003 ORTHO05D001498 5.0e-09 64.3 78 37.2
Sp4g06690 Schrenkiella parvula HOM05D000003 ORTHO05D001498 5.0e-09 64.3 76 42.1
BcaC05g27727 Brassica carinata HOM05D000003 ORTHO05D001498 6.5e-09 63.9 74 40.5
BcaC09g49335 Brassica carinata HOM05D000003 ORTHO05D001498 6.5e-09 63.9 74 44.6
Carub.0007s3605 Capsella rubella HOM05D000003 ORTHO05D001498 6.5e-09 63.9 77 39.0
BcaB04g17607 Brassica carinata HOM05D000003 ORTHO05D001498 8.5e-09 63.5 73 45.2
BcaB04g18838 Brassica carinata HOM05D000003 ORTHO05D001498 8.5e-09 63.5 73 41.1
BcaB07g33494 Brassica carinata HOM05D000003 ORTHO05D001498 8.5e-09 63.5 69 43.5
BcaB01g02800 Brassica carinata HOM05D000003 ORTHO05D027722 1.1e-08 63.2 77 40.3
BcaC04g19261 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-08 63.2 77 37.7
BcaC09g50877 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-08 63.2 76 38.2
BcaNung05100 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-08 63.2 72 44.4
BraA09t36313Z Brassica rapa HOM05D000003 ORTHO05D001498 1.1e-08 63.2 69 43.5
BcaB06g25892 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-08 62.8 69 43.5
BcaC01g05810 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-08 62.8 77 40.3
BcaC05g24575 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-08 62.8 76 40.8
BcaB02g09892 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-08 62.4 69 44.9
BcaB02g10370 Brassica carinata HOM05D000003 ORTHO05D000411 1.9e-08 62.4 69 43.5
BcaC03g13586 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-08 62.4 81 39.5
BcaNung00269 Brassica carinata HOM05D000003 ORTHO05D001498 1.9e-08 62.4 73 43.8
BcaC03g15697 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-08 62.0 70 45.7
BcaC09g48469 Brassica carinata HOM05D000003 ORTHO05D001498 2.5e-08 62.0 69 44.9
BolC2t09417H Brassica oleracea HOM05D000003 ORTHO05D001498 2.5e-08 62.0 70 45.7
Sp6g06080 Schrenkiella parvula HOM05D000003 ORTHO05D001498 2.5e-08 62.0 73 41.1
BcaB05g24840 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-08 61.6 77 40.3
BraA08t34343Z Brassica rapa HOM05D000003 ORTHO05D014927 3.2e-08 61.6 58 50.0
BcaB04g17562 Brassica carinata HOM05D000003 ORTHO05D001498 4.2e-08 61.2 73 38.4
BcaB08g36343 Brassica carinata HOM05D000003 ORTHO05D001498 4.2e-08 61.2 69 39.1
C07p34510 Brassica napus HOM05D009133 ORTHO05D016102 4.2e-08 61.2 74 41.9
BolC7t43982H Brassica oleracea HOM05D009133 ORTHO05D016102 4.2e-08 61.2 74 41.9
BcaC04g19633 Brassica carinata HOM05D000003 ORTHO05D001498 5.5e-08 60.8 79 43.0
BcaC09g48852 Brassica carinata HOM05D000003 ORTHO05D001498 5.5e-08 60.8 73 37.0
BcaC06g35222 Brassica carinata HOM05D000003 ORTHO05D001498 7.2e-08 60.5 75 36.0
BcaNung01080 Brassica carinata HOM05D000003 ORTHO05D001498 7.2e-08 60.5 73 41.1
BcaC02g12768 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-07 59.7 73 43.8
BcaC03g16750 Brassica carinata HOM05D000003 ORTHO05D012821 1.2e-07 59.7 76 36.8
BcaC09g48324 Brassica carinata HOM05D000003 ORTHO05D000004 1.2e-07 59.7 76 35.5
BcaB03g15480 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-07 59.3 77 40.3
BcaB05g24728 Brassica carinata HOM05D000003 ORTHO05D001498 1.6e-07 59.3 78 37.2
BcaC06g35181 Brassica carinata HOM05D000003 ORTHO05D000004 1.6e-07 59.3 73 35.6
AL4G33730 Arabidopsis lyrata HOM05D000419 ORTHO05D000692 2.1e-07 58.9 77 33.8
BcaC05g25363 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-07 58.9 79 41.8
BcaC05g27246 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-07 58.9 63 42.9
BcaC05g29352 Brassica carinata HOM05D000003 ORTHO05D001498 2.1e-07 58.9 79 41.8
BcaB03g16821 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-07 58.5 72 40.3
BcaC01g02801 Brassica carinata HOM05D000003 ORTHO05D000004 2.7e-07 58.5 73 35.6
BcaC01g05506 Brassica carinata HOM05D000003 ORTHO05D001498 2.7e-07 58.5 70 40.0
BcaC05g25416 Brassica carinata HOM05D000003 ORTHO05D000004 2.7e-07 58.5 73 35.6
BolC3t18275H Brassica oleracea HOM05D000003 ORTHO05D001498 2.7e-07 58.5 73 35.6
BcaB02g10097 Brassica carinata HOM05D000003 ORTHO05D001498 3.6e-07 58.2 72 40.3
BcaB02g10126 Brassica carinata HOM05D000003 ORTHO05D016704 3.6e-07 58.2 72 41.7
BcaB07g33516 Brassica carinata HOM05D000003 ORTHO05D000004 4.7e-07 57.8 73 38.4
BcaB08g34832 Brassica carinata HOM05D000003 ORTHO05D001498 4.7e-07 57.8 80 33.8
BcaC09g51803 Brassica carinata HOM05D000003 ORTHO05D001498 4.7e-07 57.8 78 37.2
C07p11460 Brassica napus HOM05D000003 ORTHO05D040554 4.7e-07 57.8 48 47.9
BolC7t41622H Brassica oleracea HOM05D000003 ORTHO05D040554 4.7e-07 57.8 48 47.9
BolC7t43105H Brassica oleracea HOM05D000003 ORTHO05D001498 4.7e-07 57.8 72 40.3
BraA02t07610Z Brassica rapa HOM05D000003 ORTHO05D001498 4.7e-07 57.8 69 43.5
Thhalv10026817m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 4.7e-07 57.8 72 40.3
BolC9t54945H Brassica oleracea HOM05D000003 ORTHO05D027722 6.1e-07 57.4 77 37.7
BraA09t38728Z Brassica rapa HOM05D000003 ORTHO05D001498 6.1e-07 57.4 69 42.0
Thhalv10009777m.g Eutrema salsugineum HOM05D000003 ORTHO05D001498 6.1e-07 57.4 72 41.7
BcaB01g03556 Brassica carinata HOM05D000003 ORTHO05D001498 8.0e-07 57.0 73 31.5
BcaB02g11015 Brassica carinata HOM05D000003 ORTHO05D000004 8.0e-07 57.0 70 37.1
BcaC01g01503 Brassica carinata HOM05D000003 ORTHO05D001498 8.0e-07 57.0 77 37.7
BcaC02g09541 Brassica carinata HOM05D000003 ORTHO05D001498 8.0e-07 57.0 73 39.7
C06p09100 Brassica napus HOM05D009133 ORTHO05D016102 8.0e-07 57.0 74 39.2
BcaC09g49254 Brassica carinata HOM05D000003 ORTHO05D001498 1.0e-06 56.6 79 35.4
BcaNung01834 Brassica carinata HOM05D000003 ORTHO05D023979 1.0e-06 56.6 72 34.7
AL7G44730 Arabidopsis lyrata HOM05D000003 ORTHO05D001498 1.4e-06 56.2 73 39.7
BcaB06g26978 Brassica carinata HOM05D000003 ORTHO05D001498 1.4e-06 56.2 80 33.8
BcaC09g47726 Brassica carinata HOM05D000003 ORTHO05D016043 1.4e-06 56.2 78 33.3
BcaC09g47764 Brassica carinata HOM05D000003 ORTHO05D016043 1.4e-06 56.2 78 33.3
BolC1t01124H Brassica oleracea HOM05D000003 ORTHO05D001498 1.4e-06 56.2 72 43.1
BraA09t37716Z Brassica rapa HOM05D000003 ORTHO05D001498 1.4e-06 56.2 75 38.7
BcaB04g16926 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-06 55.8 73 38.4
BcaC04g24062 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-06 55.8 73 38.4
BcaC05g28118 Brassica carinata HOM05D000003 ORTHO05D000004 1.8e-06 55.8 73 41.1
BcaB05g22670 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-06 55.5 73 37.0
BcaC01g04220 Brassica carinata HOM05D000003 ORTHO05D000004 2.3e-06 55.5 75 38.7
BcaC03g15901 Brassica carinata HOM05D000003 ORTHO05D001498 2.3e-06 55.5 75 36.0
BcaC07g41849 Brassica carinata HOM05D000003 ORTHO05D027177 2.3e-06 55.5 71 38.0
BcaC09g51035 Brassica carinata HOM05D000003 ORTHO05D000004 2.3e-06 55.5 73 41.1
BolC4t25304H Brassica oleracea HOM05D000003 ORTHO05D016704 4.0e-06 54.7 62 43.5
BolC4t26332H Brassica oleracea HOM05D038664 ORTHO05D033517 4.0e-06 54.7 69 39.1
BcaB05g22683 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-06 54.3 78 33.3
BcaC07g39702 Brassica carinata HOM05D000003 ORTHO05D001498 5.2e-06 54.3 80 33.8
C08p04970 Brassica napus HOM05D009133 ORTHO05D019978 5.2e-06 54.3 62 40.3
BolC4t27694H Brassica oleracea HOM05D000003 ORTHO05D023979 5.2e-06 54.3 76 34.2
BolC5t32877H Brassica oleracea HOM05D000003 ORTHO05D001498 5.2e-06 54.3 73 38.4
BolC7t42403H Brassica oleracea HOM05D000003 ORTHO05D001498 5.2e-06 54.3 73 34.2
BolC8t50468H Brassica oleracea HOM05D010545 ORTHO05D013515 5.2e-06 54.3 68 36.8
BcaC06g34829 Brassica carinata HOM05D000003 ORTHO05D001498 6.8e-06 53.9 78 33.3
BcaC07g36989 Brassica carinata HOM05D000003 ORTHO05D013515 6.8e-06 53.9 78 32.1
BolC5t33739H Brassica oleracea HOM05D010545 ORTHO05D013515 6.8e-06 53.9 68 36.8
BolC7t42827H Brassica oleracea HOM05D000003 ORTHO05D016043 6.8e-06 53.9 78 33.3
BcaB07g32767 Brassica carinata HOM05D000003 ORTHO05D001498 8.8e-06 53.5 72 38.9
BcaB07g33807 Brassica carinata HOM05D000003 ORTHO05D027300 8.8e-06 53.5 65 41.5
BcaC04g21023 Brassica carinata HOM05D000003 ORTHO05D001498 8.8e-06 53.5 76 31.6
BolC1t04496H Brassica oleracea HOM05D000003 ORTHO05D023979 8.8e-06 53.5 56 37.5
Sp2g02350 Schrenkiella parvula HOM05D000003 ORTHO05D001498 8.8e-06 53.5 73 38.4


User provided reference genes

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