Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C04p23750 Brassica napus HOM05D000952 ORTHO05D000757 3.1e-40 167.9 81 100.0
AL5G16000 Arabidopsis lyrata HOM05D000952 ORTHO05D000757 3.7e-17 91.3 47 91.5
BcaC06g31030 Brassica carinata HOM05D000952 ORTHO05D000757 4.9e-17 90.9 47 91.5
Thhalv10005144m.g Eutrema salsugineum HOM05D000952 ORTHO05D000757 8.3e-17 90.1 47 89.4
Sp2g16100 Schrenkiella parvula HOM05D000952 ORTHO05D000757 8.3e-17 90.1 47 89.4
AT3G26980 Arabidopsis thaliana HOM05D000952 ORTHO05D000757 5.4e-16 87.4 47 89.4
BraA09t35959Z Brassica rapa HOM05D000952 ORTHO05D000757 7.0e-16 87.0 47 87.2
C09p03410 Brassica napus HOM05D000952 ORTHO05D000757 1.2e-15 86.3 47 87.2
BolC9t53262H Brassica oleracea HOM05D000952 ORTHO05D000757 1.2e-15 86.3 47 87.2
BcaC06g33871 Brassica carinata HOM05D000952 ORTHO05D000757 1.6e-15 85.9 47 89.4
C07p36080 Brassica napus HOM05D000952 ORTHO05D000757 1.6e-15 85.9 47 89.4
BolC7t44122H Brassica oleracea HOM05D000952 ORTHO05D000757 1.6e-15 85.9 47 89.4
A09p03210 Brassica napus HOM05D000952 ORTHO05D000757 4.6e-15 84.3 47 87.2
Carub.0005s0516 Capsella rubella HOM05D000952 ORTHO05D000757 1.0e-14 83.2 47 87.2
BcaB04g19420 Brassica carinata HOM05D000952 ORTHO05D000757 3.9e-14 81.3 47 83.0
A06p41580 Brassica napus HOM05D000952 ORTHO05D000757 6.6e-14 80.5 47 83.0
BraA06t27083Z Brassica rapa HOM05D000952 ORTHO05D000757 6.6e-14 80.5 47 83.0
Aa31LG2G5610 Aethionema arabicum HOM05D000952 ORTHO05D000757 1.1e-13 79.7 47 83.0
C02p53600 Brassica napus HOM05D000952 ORTHO05D000757 1.4e-11 72.8 50 74.0
BolC2t11428H Brassica oleracea HOM05D000952 ORTHO05D000757 2.6e-10 68.6 60 61.7
THA.LOC104825636 Tarenaya hassleriana HOM05D000952 ORTHO05D000757 1.3e-09 66.2 47 63.8
Duzib147G1631 Durio zibethinus HOM05D000952 ORTHO05D000757 4.1e-08 61.2 47 59.6
Duzib187G1265 Durio zibethinus HOM05D000952 ORTHO05D000757 7.1e-08 60.5 47 59.6
TWI60G0481 Tripterygium wilfordii HOM05D000952 ORTHO05D000757 7.1e-08 60.5 47 61.7
Cpa.g.sc70.115 Carica papaya HOM05D000952 ORTHO05D000757 2.1e-07 58.9 47 57.4
Potri.001G325900 Populus trichocarpa HOM05D000952 ORTHO05D000757 2.1e-07 58.9 47 57.4
Prupe.3G309700 Prunus persica HOM05D000952 ORTHO05D000757 2.1e-07 58.9 47 55.3
Sabra16G0208400 Salix brachista HOM05D000952 ORTHO05D000757 2.7e-07 58.5 47 57.4
Potri.017G068100 Populus trichocarpa HOM05D000952 ORTHO05D000757 3.5e-07 58.2 47 55.3
TWI34G0263 Tripterygium wilfordii HOM05D000952 ORTHO05D000757 3.5e-07 58.2 45 62.2
ClCG05G013820 Citrullus lanatus HOM05D000952 ORTHO05D000757 4.6e-07 57.8 47 57.4
Sed0024725 Sechium edule HOM05D000952 ORTHO05D000757 6.0e-07 57.4 51 52.9
Manes.11G083600 Manihot esculenta HOM05D000952 ORTHO05D000757 7.8e-07 57.0 47 57.4
Cc07_g01020 Coffea canephora HOM05D000952 ORTHO05D000757 1.0e-06 56.6 47 57.4
SalBow4G2681 Salvia bowleyana HOM05D000952 ORTHO05D000757 1.0e-06 56.6 47 57.4
Atru.chr6.2607 Acer truncatum HOM05D000952 ORTHO05D000757 1.3e-06 56.2 47 55.3
CANSAT64G0506 Cannabis sativa HOM05D000952 ORTHO05D000757 1.3e-06 56.2 47 55.3
Eucgr.I01624 Eucalyptus grandis HOM05D000952 ORTHO05D000757 1.3e-06 56.2 47 57.4
Nitab4.5_0000519g0080 Nicotiana tabacum HOM05D000952 ORTHO05D000757 1.3e-06 56.2 47 57.4
CsaV3_3G026820 Cucumis sativus L. HOM05D000952 ORTHO05D000757 1.7e-06 55.8 47 55.3
Migut.F00039 Erythranthe guttata HOM05D000952 ORTHO05D000757 1.7e-06 55.8 47 57.4
MD09G1007300 Malus domestica HOM05D000952 ORTHO05D000757 1.7e-06 55.8 47 55.3
QL02p070694 Quercus lobata HOM05D000952 ORTHO05D000757 1.7e-06 55.8 47 55.3
Solyc02g068230.3 Solanum lycopersicum HOM05D000952 ORTHO05D000757 1.7e-06 55.8 47 57.4
Sopen02g017330 Solanum pennellii HOM05D000952 ORTHO05D000757 1.7e-06 55.8 47 57.4
TAR622G0495 Trochodendron aralioides HOM05D000952 ORTHO05D000757 1.7e-06 55.8 47 57.4
ECA238G1376 Erigeron canadensis HOM05D000952 ORTHO05D000757 2.3e-06 55.5 47 57.4
FvH4_6g53910 Fragaria vesca HOM05D000952 ORTHO05D000757 2.3e-06 55.5 47 51.1
FAN05G2353 Fragaria x ananassa HOM05D000952 ORTHO05D000757 2.3e-06 55.5 47 51.1
FAN14G4733 Fragaria x ananassa HOM05D000952 ORTHO05D000757 2.3e-06 55.5 47 51.1
FAN09G0029 Fragaria x ananassa HOM05D000952 ORTHO05D000757 3.0e-06 55.1 47 51.1
Peaxi162Scf00420g00654 Petunia axillaris HOM05D000952 ORTHO05D000757 3.0e-06 55.1 47 57.4
Psat3g167680 Pisum sativum HOM05D000952 ORTHO05D000757 3.0e-06 55.1 47 53.2
GSVIVG01033043001 Vitis vinifera HOM05D000952 ORTHO05D000757 3.0e-06 55.1 47 53.2
Aqoxy3G01674 Aquilegia oxysepala HOM05D000952 ORTHO05D000757 3.9e-06 54.7 47 55.3
Haze_14908 Corylus avellana HOM05D000952 ORTHO05D000757 3.9e-06 54.7 47 53.2
FAN02G2751 Fragaria x ananassa HOM05D000952 ORTHO05D000757 3.9e-06 54.7 45 53.3
RcHm_v2.0_Chr2g0176071 Rosa chinensis HOM05D000952 ORTHO05D000757 3.9e-06 54.7 47 51.1
TAR374G0781 Trochodendron aralioides HOM05D000952 ORTHO05D000757 3.9e-06 54.7 47 55.3
MSTRG.24108 Avicennia marina HOM05D000952 ORTHO05D000757 5.1e-06 54.3 47 55.3
CAN.G1525.1 Capsicum annuum HOM05D000952 ORTHO05D000757 5.1e-06 54.3 47 55.3
Dinv25639 Davidia involucrata HOM05D000952 ORTHO05D000757 5.1e-06 54.3 47 53.2
TWI34G0048 Tripterygium wilfordii HOM05D000952 ORTHO05D000757 5.1e-06 54.3 45 60.0
Zm00001eb085200 Zea mays HOM05D000952 ORTHO05D000757 5.1e-06 54.3 47 55.3
CiPaw.03G005200 Carya illinoinensis HOM05D000952 ORTHO05D000757 6.6e-06 53.9 47 53.2
Ciclev10017208m.g Citrus clementina HOM05D000952 ORTHO05D000757 6.6e-06 53.9 47 53.2
Dinv33314 Davidia involucrata HOM05D000952 ORTHO05D000757 6.6e-06 53.9 47 53.2
Gohir.D09G038900 Gossypium hirsutum HOM05D000952 ORTHO05D000757 6.6e-06 53.9 44 59.1
Actinidia37740 Actinidia chinensis HOM05D000952 ORTHO05D000757 8.6e-06 53.5 47 53.2
A02p34920 Brassica napus HOM05D000952 ORTHO05D000757 8.6e-06 53.5 27 88.9


User provided reference genes

Program Settings